Retrieving infinite numbers of patterns in a spin-glass model of immune networks

The similarity between neural and immune networks has been known for decades, but so far we did not understand the mechanism that allows the immune system, unlike associative neural networks, to recall and execute a large number of memorized defense strategies {\em in parallel}. The explanation turns out to lie in the network topology. Neurons interact typically with a large number of other neurons, whereas interactions among lymphocytes in immune networks are very specific, and described by graphs with finite connectivity. In this paper we use replica techniques to solve a statistical mechanical immune network model with `coordinator branches' (T-cells) and `effector branches' (B-cells), and show how the finite connectivity enables the system to manage an extensive number of immune clones simultaneously, even above the percolation threshold. The system exhibits only weak ergodicity breaking, so that both multiple antigen defense and homeostasis can be accomplished.

[1]  G. Weisbuch,et al.  Immunology for physicists , 1997 .

[2]  B. Wemmenhove,et al.  Finite connectivity attractor neural networks , 2003 .

[3]  (1 + 8)-dimensional attractor neural networks , 2000 .

[4]  Colin J. Thompson,et al.  Mathematical Statistical Mechanics , 1972 .

[5]  M. Mézard,et al.  The Bethe lattice spin glass revisited , 2000, cond-mat/0009418.

[6]  A. Barra,et al.  A thermodynamic perspective of immune capabilities. , 2011, Journal of theoretical biology.

[7]  C. Goodnow,et al.  Cellular and genetic mechanisms of self tolerance and autoimmunity , 2005, Nature.

[8]  Adriano Barra,et al.  Extensive parallel processing on scale-free networks. , 2014, Physical review letters.

[9]  Elena Agliari,et al.  Collective behaviours: from biochemical kinetics to electronic circuits , 2013, Scientific Reports.

[10]  James R Faeder,et al.  Stochastic effects and bistability in T cell receptor signaling. , 2008, Journal of theoretical biology.

[11]  G. Parisi A simple model for the immune network. , 1990, Proceedings of the National Academy of Sciences of the United States of America.

[12]  Michael J. Berry,et al.  Weak pairwise correlations imply strongly correlated network states in a neural population , 2005, Nature.

[13]  A. Chakraborty,et al.  Thymic selection of T-cell receptors as an extreme value problem. , 2009, Physical review letters.

[14]  Evgeny Katz,et al.  Notes on stochastic (bio)-logic gates: computing with allosteric cooperativity , 2014, Scientific Reports.

[15]  Elena Agliari,et al.  Multitasking associative networks. , 2011, Physical review letters.

[16]  A. Perelson,et al.  Size and connectivity as emergent properties of a developing immune network. , 1991, Journal of theoretical biology.

[17]  Albert-László Barabási,et al.  Statistical mechanics of complex networks , 2001, ArXiv.

[18]  E. Jaynes Information Theory and Statistical Mechanics , 1957 .

[19]  R. Rosenfeld Nature , 2009, Otolaryngology--head and neck surgery : official journal of American Academy of Otolaryngology-Head and Neck Surgery.

[20]  A. Annibale,et al.  Associative networks with diluted patterns: dynamical analysis at low and medium load , 2014, 1405.2454.

[21]  Yufang Shi,et al.  Apoptosis signaling pathways and lymphocyte homeostasis , 2007, Cell Research.

[22]  A Large Scale Dynamical System Immune Network Model with Finite Connectivity(Oscillation, Chaos and Network Dynamics in Nonlinear Science) , 2006 .

[23]  Michael W Deem,et al.  Sequence space localization in the immune system response to vaccination and disease. , 2003, Physical review letters.

[24]  W. Bialek Biophysics: Searching for Principles , 2012 .

[25]  Henri Atlan,et al.  Theories of Immune Networks , 1989, Springer Series in Synergetics.

[26]  A. Arkin,et al.  Stochastic amplification and signaling in enzymatic futile cycles through noise-induced bistability with oscillations. , 2005, Proceedings of the National Academy of Sciences of the United States of America.

[27]  Arup K Chakraborty,et al.  Quorum sensing allows T cells to discriminate between self and nonself , 2013, Proceedings of the National Academy of Sciences.

[28]  W. Bialek,et al.  Maximum entropy models for antibody diversity , 2009, Proceedings of the National Academy of Sciences.

[29]  A. Barra,et al.  A Hebbian approach to complex-network generation , 2010, 1009.1343.

[30]  M. A. Muñoz,et al.  Griffiths phases and the stretching of criticality in brain networks , 2013, Nature Communications.

[31]  A. Barra,et al.  Retrieval capabilities of hierarchical networks: from Dyson to Hopfield. , 2015, Physical review letters.

[32]  A. Annibale,et al.  A dynamical model of the adaptive immune system: effects of cells promiscuity, antigens and B–B interactions , 2015, 1505.03785.

[33]  Simon Wain-Hobson Virus Dynamics: Mathematical Principles of Immunology and Virology , 2001, Nature Medicine.

[34]  Peter Sollich,et al.  Theory of Neural Information Processing Systems , 2005 .

[35]  A S Perelson,et al.  Pattern formation in one- and two-dimensional shape-space models of the immune system. , 1992, Journal of theoretical biology.

[36]  Jayajit Das,et al.  Purely stochastic binary decisions in cell signaling models without underlying deterministic bistabilities , 2007, Proceedings of the National Academy of Sciences.

[37]  Elena Agliari,et al.  Immune networks: multi-tasking capabilities at medium load , 2013, 1302.7259.

[38]  O. Sporns,et al.  Complex brain networks: graph theoretical analysis of structural and functional systems , 2009, Nature Reviews Neuroscience.

[39]  Jean-Philippe Bouchaud,et al.  Trap models and slow dynamics in supercooled liquids. , 2003, Physical review letters.

[40]  A. Coolen,et al.  Dynamical replica analysis of disordered Ising spin systems on finitely connected random graphs. , 2005, Physical review letters.

[41]  Sompolinsky,et al.  Storing infinite numbers of patterns in a spin-glass model of neural networks. , 1985, Physical review letters.