Purification of plasmid DNA by an integrated operation comprising tangential flow filtration and nitrocellulose adsorption.

There is an increasing interest in the development of scaleable and reproducible plasmid DNA purification protocols for vaccine and gene therapy. The use of an integrated unit operation, comprising tangential flow microfiltration coupled with the adsorption of contaminants onto nitrocellulose membranes as a single processing step was examined in this work. Experiments were performed using a custom-built tangential flow microfiltration rig (membrane area=12.5 cm(2)). Tangential flow filtration-adsorption of E. coli lysates containing a plasmid product removed most solids (>75%) and decreased chromosomal DNA contamination by 75% w/w. Total plasmid DNA concentration and supercoiled content of the permeate were virtually identical to those of the feed, indicating a recovery yield of 100% (transmission equal to 1). Results were similar for E. coli lysates containing either a 6.9 kb or a 20 kb plasmid. Significant reductions in RNA, endotoxin, and protein levels were also observed. The reproducibility and potential for scale up of this integrated filtration-adsorption operation makes it at attractive option for intermediate- to large-scale pharmaceutical-grade plasmid processing.

[1]  J. Sambrook,et al.  Molecular Cloning: A Laboratory Manual , 2001 .

[2]  M. S. Levy,et al.  Rapid quantitation and monitoring of plasmid DNA using an ultrasensitive DNA-binding dye. , 1999, Biotechnology and bioengineering.

[3]  P Dunnill,et al.  Biochemical engineering approaches to the challenges of producing pure plasmid DNA. , 2000, Trends in biotechnology.

[4]  Richard C. Willson,et al.  Purification of plasmid DNA using selective precipitation by compaction agents , 1999, Nature Biotechnology.

[5]  D. Prazeres,et al.  Downstream processing of plasmid DNA for gene therapy and DNA vaccine applications. , 2000, Trends in biotechnology.

[6]  P Dunnill,et al.  Removal of contaminant nucleic acids by nitrocellulose filtration during pharmaceutical-grade plasmid DNA processing. , 2000, Journal of biotechnology.

[7]  M. M. Diogo,et al.  Separation and analysis of plasmid denatured forms using hydrophobic interaction chromatography. , 1999, Analytical biochemistry.

[8]  M. Marquet,et al.  Cancer gene therapy using plasmid DNA: purification of DNA for human clinical trials. , 1995, Human gene therapy.

[9]  D. Gillespie,et al.  Biological activity of mRNA immobilized on nitrocellulose in NaI. , 1983, Proceedings of the National Academy of Sciences of the United States of America.

[10]  R. Armstrong,et al.  [90b] Chromatography of nucleic acids on nitrocellulose columns , 1967 .

[11]  M. Butler,et al.  Purification of plasmid DNA by tangential flow filtration. , 2000, Biotechnology and bioengineering.

[12]  M. Kula,et al.  Dye‐ligand membranes as selective adsorbents for rapid purification of enzymes: A case study , 1992, Biotechnology and bioengineering.

[13]  A Lyddiatt,et al.  Biochemical recovery and purification of gene therapy vectors. , 1998, Current opinion in biotechnology.

[14]  A. Mountain,et al.  Gene therapy: the first decade. , 2000, Trends in biotechnology.

[15]  M. Vijayalakshmi,et al.  Endotoxin removal with poly(ethyleneimine)-immobilized adsorbers: Sepharose 4B versus flat sheet and hollow fibre membranes. , 1998, Journal of chromatography. B, Biomedical sciences and applications.

[16]  H. Erdjument-Bromage,et al.  Methodical analysis of protein-nitrocellulose interactions to design a refined digestion protocol. , 1996, Analytical biochemistry.

[17]  H. Birnboim,et al.  A rapid alkaline extraction procedure for screening recombinant plasmid DNA. , 1979, Nucleic acids research.

[18]  M. S. Levy,et al.  Quantitation of supercoiled circular content in plasmid DNA solutions using a fluorescence-based method. , 2000, Nucleic Acids Research.

[19]  F B Anspach,et al.  Endotoxin removal from protein solutions. , 2000, Journal of biotechnology.

[20]  M. S. Levy,et al.  Separation of supercoiled and open-circular plasmid DNA by liquid-liquid counter-current chromatography , 2001, Biotechnology Letters.