A Metagenomic Analysis of Pandemic Influenza A (2009 H1N1) Infection in Patients from North America
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Steve Miller | John Hackett | Charles Y. Chiu | Alexander L. Greninger | Dylan R. Pillai | Taylor Sittler | Tony Mazzulli | T. Sittler | Guixia Yu | N. Roubinian | T. Mazzulli | D. Pillai | C. Arias | C. Chiu | Steve Miller | A. Greninger | G. Schochetman | P. Iša | J. Hackett | P. Tang | Guixia Yu | C. Guyard | Cyril Guyard | Eunice C. Chen | Alex Scheinerman | Nareg Roubinian | Edward Kim | Pavel Isa | Carlos F. Arias | Gerald Schochetman | Patrick Tang | E. Chen | S. Miller | Alex Scheinerman | Edward Kim
[1] Forest Rohwer,et al. Metagenomic Analysis of Respiratory Tract DNA Viral Communities in Cystic Fibrosis and Non-Cystic Fibrosis Individuals , 2009, PloS one.
[2] J. Derisi,et al. Microarray-based detection and genotyping of viral pathogens , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[3] Tao Zhang,et al. RNA Viral Community in Human Feces: Prevalence of Plant Pathogenic Viruses , 2005, PLoS biology.
[4] B. Thiers,et al. Clonal Integration of a Polyomavirus in Human Merkel Cell Carcinoma , 2009 .
[5] D. Toney,et al. Identification of a Novel Astrovirus (Astrovirus VA1) Associated with an Outbreak of Acute Gastroenteritis , 2009, Journal of Virology.
[6] E. Mignot,et al. Kleine–Levin syndrome: A systematic study of 108 patients , 2008, Annals of neurology.
[7] E. Delong,et al. Development and quantitative analyses of a universal rRNA-subtraction protocol for microbial metatranscriptomics , 2010, The ISME Journal.
[8] N. Khardori,et al. Triple-Reassortant Swine Influenza A (H1) in Humans in the United States, 2005–2009 , 2009 .
[9] S. S. Sherman,et al. Rapid-test sensitivity for novel swine-origin influenza A (H1N1) virus in humans. , 2009, The New England journal of medicine.
[10] Wing-Kin Sung,et al. Large-scale evolutionary surveillance of the 2009 H1N1 influenza A virus using resequencing arrays , 2010, Nucleic acids research.
[11] L. Finelli,et al. Emergence of a novel swine-origin influenza A (H1N1) virus in humans. , 2009, The New England journal of medicine.
[12] Gary J. Vora,et al. Identifying Influenza Viruses with Resequencing Microarrays , 2006, Emerging infectious diseases.
[13] M. Aepfelbacher,et al. Xenotropic Murine Leukemia Virus–related Gammaretrovirus in Respiratory Tract , 2010, Emerging infectious diseases.
[14] J. Treanor. Influenza vaccine--outmaneuvering antigenic shift and drift. , 2004, The New England journal of medicine.
[15] C. Samuel,et al. Antiviral Actions of Interferons , 2001, Clinical Microbiology Reviews.
[16] Huaiyu Mi,et al. PANTHER pathway: an ontology-based pathway database coupled with data analysis tools. , 2009, Methods in molecular biology.
[17] W. Ian Lipkin,et al. Genetic Detection and Characterization of Lujo Virus, a New Hemorrhagic Fever–Associated Arenavirus from Southern Africa , 2009, PLoS pathogens.
[18] Yang Liu,et al. Panmicrobial Oligonucleotide Array for Diagnosis of Infectious Diseases , 2007, Emerging infectious diseases.
[19] E. Delwart,et al. Metagenomic Analyses of Viruses in Stool Samples from Children with Acute Flaccid Paralysis , 2009, Journal of Virology.
[20] Julie D Thompson,et al. Multiple Sequence Alignment Using ClustalW and ClustalX , 2003, Current protocols in bioinformatics.
[21] David Wang,et al. Utility of DNA Microarrays for Detection of Viruses in Acute Respiratory Tract Infections in Children , 2008, Jornal de Pediatria.
[22] Amanda Balish,et al. Triple-reassortant swine influenza A (H1) in humans in the United States, 2005-2009. , 2009, The New England journal of medicine.
[23] J. Derisi,et al. The complete genome of klassevirus – a novel picornavirus in pediatric stool , 2009, Virology Journal.
[24] J. Derisi,et al. Identification of a Novel Gammaretrovirus in Prostate Tumors of Patients Homozygous for R462Q RNASEL Variant , 2006, PLoS pathogens.
[25] J. Derisi,et al. Identification of cardioviruses related to Theiler's murine encephalomyelitis virus in human infections , 2008, Proceedings of the National Academy of Sciences.
[26] J. Simons,et al. A new arenavirus in a cluster of fatal transplant-associated diseases. , 2008, The New England journal of medicine.
[27] T. Pruett. A New Arenavirus in a Cluster of Fatal Transplant-Associated Diseases , 2009 .
[28] Joseph L DeRisi,et al. E-Predict: a computational strategy for species identification based on observed DNA microarray hybridization patterns , 2005, Genome Biology.
[29] Joseph L. DeRisi,et al. The Long March: A Sample Preparation Technique that Enhances Contig Length and Coverage by High-Throughput Short-Read Sequencing , 2008, PloS one.
[30] J. Derisi,et al. Pan-Viral Screening of Respiratory Tract Infections in Adults With and Without Asthma Reveals Unexpected Human Coronavirus and Human Rhinovirus Diversity , 2007, The Journal of infectious diseases.
[31] Simon Wessely,et al. Comment on “Detection of an Infectious Retrovirus, XMRV, in Blood Cells of Patients with Chronic Fatigue Syndrome” , 2010 .
[32] Joseph L. DeRisi,et al. Microarray Detection of Human Parainfluenzavirus 4 Infection Associated with Respiratory Failure in an Immunocompetent Adult , 2006, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.
[33] David A Stenger,et al. Broad-spectrum respiratory tract pathogen identification using resequencing DNA microarrays. , 2006, Genome research.
[34] J. Stockman. Severe 2009 H1N1 Influenza in Pregnant and Postpartum Women in California , 2011 .
[35] Juliane C. Dohm,et al. Substantial biases in ultra-short read data sets from high-throughput DNA sequencing , 2008, Nucleic acids research.
[36] J. Mullikin,et al. SSAHA: a fast search method for large DNA databases. , 2001, Genome research.
[37] M. Honein,et al. Severe 2009 H1N1 influenza in pregnant and postpartum women in California. , 2010, The New England journal of medicine.
[38] R. Garten,et al. Detection of Molecular Markers of Drug Resistance in 2009 Pandemic Influenza A (H1N1) Viruses by Pyrosequencing , 2009, Antimicrobial Agents and Chemotherapy.
[39] A. García-Sastre,et al. Inefficient Control of Host Gene Expression by the 2009 Pandemic H1N1 Influenza A Virus NS1 Protein , 2010, Journal of Virology.
[40] C. Chiu,et al. Metagenomics for the discovery of novel human viruses. , 2010, Future microbiology.
[41] Lu Wang,et al. The NIH Human Microbiome Project. , 2009, Genome research.
[42] S. Turner,et al. Real-time DNA sequencing from single polymerase molecules. , 2010, Methods in enzymology.
[43] J. Mikovits,et al. Detection of an Infectious Retrovirus, XMRV, in Blood Cells of Patients with Chronic Fatigue Syndrome , 2009, Science.
[44] R. Schooley,et al. Detection in 2009 of the Swine Origin Influenza A (H1N1) Virus by a Subtyping Microarray , 2009, Journal of Clinical Microbiology.
[45] James M. Eldred,et al. Viral Discovery and Sequence Recovery Using DNA Microarrays , 2003, PLoS biology.
[46] Gavin J. D. Smith,et al. Origins and evolutionary genomics of the 2009 swine-origin H1N1 influenza A epidemic , 2009, Nature.
[47] James A. Smagala,et al. Experimental Evaluation of the FluChip Diagnostic Microarray for Influenza Virus Surveillance , 2006, Journal of Clinical Microbiology.
[48] M. A. Nelson,et al. The Next Generation Becomes the Now Generation , 2010, PLoS genetics.
[49] E. Lyons,et al. Pandemic Potential of a Strain of Influenza A (H1N1): Early Findings , 2009, Science.
[50] James A. Smagala,et al. Robust Sequence Selection Method Used To Develop the FluChip Diagnostic Microarray for Influenza Virus , 2006, Journal of Clinical Microbiology.
[51] J. Derisi,et al. Recovery of divergent avian bornaviruses from cases of proventricular dilatation disease: Identification of a candidate etiologic agent , 2008, Virology Journal.
[52] J. Derisi,et al. Achalasia and Viral Infection: New Insights from Veterinary Medicine , 2010, Science Translational Medicine.
[53] N. Gross-Camp,et al. Multiple Diverse Circoviruses Infect Farm Animals and Are Commonly Found in Human and Chimpanzee Feces , 2009, Journal of Virology.
[54] Christian Drosten,et al. Characterization of a Novel Coronavirus Associated with Severe Acute Respiratory Syndrome , 2003, Science.
[55] J. Kawai,et al. Direct Metagenomic Detection of Viral Pathogens in Nasal and Fecal Specimens Using an Unbiased High-Throughput Sequencing Approach , 2009, PloS one.
[56] G. Palacios,et al. Streptococcus pneumoniae Coinfection Is Correlated with the Severity of H1N1 Pandemic Influenza , 2009, PloS one.
[57] T. Kunz,et al. Bat Guano Virome: Predominance of Dietary Viruses from Insects and Plants plus Novel Mammalian Viruses , 2010, Journal of Virology.
[58] Masato Tashiro,et al. Characterization of Quasispecies of Pandemic 2009 Influenza A Virus (A/H1N1/2009) by De Novo Sequencing Using a Next-Generation DNA Sequencer , 2010, PloS one.