Mechanical modeling of collective cell migration: An agent-based and continuum material approach
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[1] Bart Smeets,et al. Modeling extracellular matrix viscoelasticity using smoothed particle hydrodynamics with improved boundary treatment , 2017 .
[2] Adrian Moure,et al. Phase-field model of cellular migration: Three-dimensional simulations in fibrous networks , 2017 .
[3] José Manuel García-Aznar,et al. Collective cell durotaxis emerges from long-range intercellular force transmission , 2016, Science.
[4] Timothy A. Davis,et al. Algorithm 832: UMFPACK V4.3---an unsymmetric-pattern multifrontal method , 2004, TOMS.
[5] Dapeng Bi,et al. A density-independent rigidity transition in biological tissues , 2014, Nature Physics.
[6] E. A. Novikova,et al. Persistence-Driven Durotaxis: Generic, Directed Motility in Rigidity Gradients. , 2015, Physical review letters.
[7] Sean X. Sun,et al. Cytoskeletal Cross-linking and Bundling in Motor-Independent Contraction , 2010, Current Biology.
[8] M J Gómez-Benito,et al. Nonlinear finite element simulations of injuries with free boundaries: Application to surgical wounds , 2014, International journal for numerical methods in biomedical engineering.
[9] J. Rosenblatt,et al. Mechanical stretch triggers rapid epithelial cell division through Piezo1 , 2017, Nature.
[10] David Swigon,et al. Continuum Model of Collective Cell Migration in Wound Healing and Colony Expansion , 2022 .
[11] David A. Weitz,et al. Physical forces during collective cell migration , 2009 .
[12] Sean X. Sun,et al. Cell density and actomyosin contractility control the organization of migrating collectives within an epithelium , 2016, Molecular biology of the cell.
[13] Andrew R. Harris,et al. Emergence of homeostatic epithelial packing and stress dissipation through divisions oriented along the long cell axis , 2015, Proceedings of the National Academy of Sciences.
[14] Thomas Lecuit,et al. Mechanics of Epithelial Tissue Homeostasis and Morphogenesis , 2013, Science.
[15] B. Ladoux,et al. Mechanics of epithelial tissues during gap closure. , 2016, Current opinion in cell biology.
[16] Rastko Sknepnek,et al. Active Vertex Model for cell-resolution description of epithelial tissue mechanics , 2017, PLoS Comput. Biol..
[17] G. Charras,et al. Formation of adherens junctions leads to the emergence of a tissue-level tension in epithelial monolayers , 2014, Journal of Cell Science.
[18] Roeland M. H. Merks,et al. Vascular networks due to dynamically arrested crystalline ordering of elongated cells. , 2012, Physical review. E, Statistical, nonlinear, and soft matter physics.
[19] Utkarsh Ayachit,et al. The ParaView Guide: A Parallel Visualization Application , 2015 .
[20] A. Kabla,et al. Gap geometry dictates epithelial closure efficiency , 2015, Nature Communications.
[21] G. Charras,et al. A question of time: tissue adaptation to mechanical forces. , 2016, Current opinion in cell biology.
[22] Bart Smeets,et al. Analysis of Initial Cell Spreading Using Mechanistic Contact Formulations for a Deformable Cell Model , 2013, PLoS Comput. Biol..
[23] J. García-Aznar,et al. A hybrid computational model to explore the topological characteristics of epithelial tissues , 2017, International journal for numerical methods in biomedical engineering.
[24] G. Charras,et al. Characterizing the mechanics of cultured cell monolayers , 2012, Proceedings of the National Academy of Sciences.
[25] M. Sheetz,et al. Cell crawling mediates collective cell migration to close undamaged epithelial gaps , 2012, Proceedings of the National Academy of Sciences.
[26] J. Fredberg,et al. Unjamming and cell shape in the asthmatic airway epithelium , 2015, Nature materials.
[27] Brian A. Camley,et al. Physical models of collective cell motility: from cell to tissue , 2017, Journal of physics D: Applied physics.
[28] M Cristina Marchetti,et al. Motility-driven glass and jamming transitions in biological tissues. , 2015, Physical Review X.
[29] M. Dembo,et al. Cell movement is guided by the rigidity of the substrate. , 2000, Biophysical journal.
[30] Konrad Basler,et al. Exploring the effects of mechanical feedback on epithelial topology , 2010, Development.
[31] A. Rodríguez‐Ferran,et al. Hybrid cell‐centred/vertex model for multicellular systems with equilibrium‐preserving remodelling , 2017, International journal for numerical methods in biomedical engineering.
[32] Nick Jagiella,et al. Simulating tissue mechanics with agent-based models: concepts, perspectives and some novel results , 2015 .
[33] Ignacio Pagonabarraga,et al. Emergent structures and dynamics of cell colonies by contact inhibition of locomotion , 2016, Proceedings of the National Academy of Sciences.
[34] G. Wayne Brodland,et al. Forces driving epithelial wound healing , 2014, Nature Physics.
[35] Pedro Moreo,et al. Modeling mechanosensing and its effect on the migration and proliferation of adherent cells. , 2008, Acta biomaterialia.
[36] Chwee Teck Lim,et al. Mechanics of epithelial closure over non-adherent environments , 2015, Nature Communications.
[37] A. Czirók,et al. Collective cell streams in epithelial monolayers depend on cell adhesion , 2013, New journal of physics.
[38] J. García-Aznar,et al. A discrete approach for modeling cell–matrix adhesions , 2014, CPM 2014.
[39] Wes McKinney,et al. Data Structures for Statistical Computing in Python , 2010, SciPy.
[40] David Wells,et al. The deal.II library, version 8.5 , 2013, J. Num. Math..
[41] Vincent Hakim,et al. Collective Cell Motion in an Epithelial Sheet Can Be Quantitatively Described by a Stochastic Interacting Particle Model , 2013, PLoS Comput. Biol..