Theoretical Approaches to the Study of Non-Bonded Interactions

There have been two main approaches to modelling the weak intermolecular forces between closed shell molecules for simulating the properties of the molecular solid, liquid and gas. Quite detailed model intermolecular potentials, specific to each molecule, are used for small polyatomics, such as HF, Cl2 and water. These model potentials are often derived, at least in part, from ab initio calculations, and are tested for their ability to reproduce the spectra of van der Waals dimers or molecular beam experiments as well as condensed phase simulations. In contrast, the models for intermolecular forces used to simulate organic and biochemical interactions are mainly derived by assuming that each intermolecular atom-atom interaction is transferable between different molecules. Such models are usually derived empirically, by fitting to a range of experimental data such as molecular crystal structures. Such model potentials are now used to improve our understanding of biochemical interactions, including drug design. The realism and reliability of such simulations depends fundamentally on the accuracy of the model for the intermolecular forces, and thus we seek more accurate model potentials for organic molecules. Most of the recent progress towards this goal has come from extending the ideas and techniques, which are used to develop accurate potentials for small polyatomics, to larger molecules.

[1]  A. Stone,et al.  Electrostatic predictions of shapes and properties of Van der Waals molecules , 1986 .

[2]  Robin Taylor,et al.  IsoStar: A library of information about nonbonded interactions , 1997, J. Comput. Aided Mol. Des..

[3]  A. Pertsin,et al.  The Atom-Atom Potential Method: Applications to Organic Molecular Solids , 1987 .

[4]  A. Stone,et al.  Towards an accurate intermolecular potential for water , 1992 .

[5]  Anthony J. Stone,et al.  Computation of charge-transfer energies by perturbation theory , 1993 .

[6]  A. Gavezzotti,et al.  Geometry of the Intermolecular X-H.cntdot..cntdot..cntdot.Y (X, Y = N, O) Hydrogen Bond and the Calibration of Empirical Hydrogen-Bond Potentials , 1994 .

[7]  Robert Moszynski,et al.  Perturbation Theory Approach to Intermolecular Potential Energy Surfaces of van der Waals Complexes , 1994 .

[8]  Robin Taylor,et al.  On the hydrogen bonding abilities of phenols and anisoles , 1997 .

[9]  Jeremy G. Vinter,et al.  Extended electron distributions applied to the molecular mechanics of some intermolecular interactions , 1994, J. Comput. Aided Mol. Des..

[10]  S. Price,et al.  An overlap model for estimating the anisotropy of repulsion , 1990 .

[11]  A. Gavezzotti,et al.  Empirical intermolecular potentials for organic crystals: the `6‐exp' approximation revisited , 1993 .

[12]  Kenneth B. Wiberg,et al.  Comparison of atomic charges derived via different procedures , 1993, J. Comput. Chem..

[13]  D. E. Williams,et al.  Nonbonded potentials for azahydrocarbons: the importance of the Coulombic interaction , 1984 .

[14]  D. Millen,et al.  Directional character, strength, and nature of the hydrogen bond in gas-phase dimers , 1987 .

[15]  Sarah L. Price,et al.  SOME NEW IDEAS IN THE THEORY OF INTERMOLECULAR FORCES - ANISOTROPIC ATOM ATOM POTENTIALS , 1988 .

[16]  S. Price Anisotropic atom-atom potentials , 1996 .

[17]  Sarah L. Price,et al.  A systematic intermolecular potential method applied to chlorine , 1990 .

[18]  A. Stone,et al.  Intermolecular forces in van der waals dimers , 1986 .

[19]  Anthony J. Stone,et al.  An intermolecular perturbation theory for the region of moderate overlap , 1984 .

[20]  Jeremy G. Vinter,et al.  Extended electron distributions applied to the molecular mechanics of some intermolecular interactions. II. Organic complexes , 1996, J. Comput. Aided Mol. Des..

[21]  S. Lifson,et al.  Energy functions for peptides and proteins. I. Derivation of a consistent force field including the hydrogen bond from amide crystals. , 1974, Journal of the American Chemical Society.

[22]  A. Kitaigorodsky,et al.  The Atom-Atom Potential Method , 1987 .

[23]  Robin Taylor,et al.  Hydrogen bonding properties of oxygen and nitrogen acceptors in aromatic heterocycles , 1997 .

[24]  Chong Sze Tong,et al.  Anisotropy of atom–atom repulsions , 1994, J. Comput. Chem..

[25]  P. Kollman,et al.  Advancing beyond the atom‐centered model in additive and nonadditive molecular mechanics , 1997 .

[26]  A. Stone,et al.  The Nature of -Cl.cntdot..cntdot..cntdot.Cl- Intermolecular Interactions , 1994 .

[27]  John B. O. Mitchell,et al.  Gaussian multipoles in practice: Electrostatic energies for intermolecular potentials , 1994, J. Comput. Chem..

[28]  D. Hadzi Theoretical treatments of hydrogen bonding , 1997 .

[29]  Sarah L. Price,et al.  Role of electrostatic interactions in determining the crystal structures of polar organic molecules. A distributed multipole study , 1996 .