Ligation-Mediated PCR for Analysis of UV Damage

[1]  S. Tornaletti,et al.  UV light as a footprinting agent: modulation of UV-induced DNA damage by transcription factors bound at the promoters of three human genes. , 1995, Journal of molecular biology.

[2]  S. Tornaletti,et al.  Complete and tissue-independent methylation of CpG sites in the p53 gene: implications for mutations in human cancers. , 1995, Oncogene.

[3]  S. Tornaletti,et al.  Slow repair of pyrimidine dimers at p53 mutation hotspots in skin cancer. , 1994, Science.

[4]  R. Drouin,et al.  DNA repair rates mapped along the human PGK1 gene at nucleotide resolution. , 1994, Science.

[5]  G. Pfeifer,et al.  In vivo protein-DNA interactions at the c-jun promoter: preformed complexes mediate the UV response , 1993, Molecular and cellular biology.

[6]  S. Tornaletti,et al.  The distribution of UV photoproducts along the human p53 gene and its relation to mutations in skin cancer. , 1993, Oncogene.

[7]  G. Pfeifer,et al.  Detection of DNA adducts at the DNA sequence level by ligation-mediated PCR. , 1993, Mutation research.

[8]  A. Sancar,et al.  Molecular mechanism of transcription-repair coupling. , 1993, Science.

[9]  A. Riggs,et al.  Genomic footprinting by ligation mediated polymerase chain reaction. , 1993, Methods in molecular biology.

[10]  G. Pfeifer,et al.  Mapping of UV photoproducts within ras proto-oncogenes in UV-irradiated cells: correlation with mutations in human skin cancer. , 1992, Oncogene.

[11]  A. Riggs,et al.  Binding of transcription factors creates hot spots for UV photoproducts in vivo , 1992, Molecular and cellular biology.

[12]  A. Riggs,et al.  In vivo mapping of a DNA adduct at nucleotide resolution: detection of pyrimidine (6-4) pyrimidone photoproducts by ligation-mediated polymerase chain reaction. , 1991, Proceedings of the National Academy of Sciences of the United States of America.

[13]  B. Wold,et al.  In vivo footprinting of a muscle specific enhancer by ligation mediated PCR. , 1990, Science.

[14]  W. Rychlik,et al.  A computer program for choosing optimal oligonucleotides for filter hybridization, sequencing and in vitro amplification of DNA. , 1989, Nucleic acids research.

[15]  B. Wold,et al.  Genomic sequencing and methylation analysis by ligation mediated PCR. , 1989, Science.

[16]  D. Mitchell,et al.  THE BIOLOGY OF THE (6–4) PHOTOPRODUCT , 1989, Photochemistry and photobiology.

[17]  D. Brash.  UV MUTAGENIC PHOTOPRODUCTS IN Escherichia coli AND HUMAN CELLS: A MOLECULAR GENETICS PERSPECTIVE ON HUMAN SKIN CANCER * , 1988, Photochemistry and photobiology.

[18]  G. Renault,et al.  Sequence effect on alkali-sensitive sites in UV-irradiated SV40 DNA. , 1987, Nucleic acids research.

[19]  P. Hanawalt,et al.  Selective removal of transcription-blocking DNA damage from the transcribed strand of the mammalian DHFR gene , 1987, Cell.

[20]  J M Gale,et al.  UV-induced formation of pyrimidine dimers in nucleosome core DNA is strongly modulated with a period of 10.3 bases. , 1987, Proceedings of the National Academy of Sciences of the United States of America.

[21]  S. Selleck,et al.  Photofootprinting in vivo detects transcription-dependent changes in yeast TATA boxes , 1987, Nature.

[22]  R. Schaaper,et al.  The C-C (6-4) UV photoproduct is mutagenic in Escherichia coli. , 1986, Proceedings of the National Academy of Sciences of the United States of America.

[23]  P. Hanawalt,et al.  DNA repair in an active gene: Removal of pyrimidine dimers from the DHFR gene of CHO cells is much more efficient than in the genome overall , 1985, Cell.

[24]  J. Sambrook,et al.  Molecular Cloning: A Laboratory Manual , 2001 .

[25]  W. Haseltine,et al.  UV-induced mutation hotspots occur at DNA damage hotspots , 1982, Nature.

[26]  W. Haseltine,et al.  Distribution of UV light-induced damage in a defined sequence of human DNA: detection of alkaline-sensitive lesions at pyrimidine nucleoside-cytidine sequences. , 1981, Proceedings of the National Academy of Sciences of the United States of America.

[27]  W. Haseltine,et al.  Comparison of the cleavage of pyrimidine dimers by the bacteriophage T4 and Micrococcus luteus UV-specific endonucleases. , 1980, The Journal of biological chemistry.

[28]  W. Haseltine,et al.  Cleavage of pyrimidine dimers in specific DNA sequences by a pyrimidine dimer DNA-glycosylase of M. luteus , 1980, Nature.

[29]  W. Gilbert,et al.  Sequencing end-labeled DNA with base-specific chemical cleavages. , 1980, Methods in enzymology.