Cross-species transmission and PB2 mammalian adaptations of highly pathogenic avian influenza A/H5N1 viruses in Chile
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M. Nelson | L. Almonacid | C. Pardo-Roa | R. Medina | R. Fasce | C. Aguayo | V. Neira | Naomi Ariyama | C. Mathieu | Jorge Fernández | M. Johow | M. Ulloa | Claudia Ávila | Hugo Araya | Álvaro González | Gabriela Munoz | Carlos Navarro | R. Reyes | Eugenia Fuentes Luppichini | Ricardo Vergara | Carmen Gloria González | Rodolfo B. Reyes | Christian Mathieu | Magdalena Johow | N. Ariyama | Gabriela Muñoz
[1] M. Martínez-Gutiérrez,et al. Multiple introductions of highly pathogenic avian influenza H5N1 clade 2.3.4.4b into South America. , 2023, Travel medicine and infectious disease.
[2] Gisela Isasi-Rivas,et al. Detection and Genomic Characterization of an Avian Influenza Virus Subtype H5N1 (Clade 2.3.4.4b) Strain Isolated from a Pelican in Peru , 2023, Microbiology resource announcements.
[3] D. Weissman,et al. Development of a nucleoside-modified mRNA vaccine against clade 2.3.4.4b H5 highly pathogenic avian influenza virus , 2023, bioRxiv.
[4] C. Pardo-Roa,et al. Emergence and rapid dissemination of highly pathogenic avian influenza virus H5N1 clade 2.3.4.4b in wild birds, Chile , 2023, bioRxiv.
[5] Alonzo Alfaro-Núñez,et al. First case of human infection with highly pathogenic H5 avian Influenza A virus in South America: A new zoonotic pandemic threat for 2023? , 2023, Journal of travel medicine.
[6] X. Chen,et al. Global epidemiology of animal influenza infections with explicit virus subtypes until 2016: A spatio-temporal descriptive analysis , 2023, One health.
[7] James J. Davis,et al. Introducing the Bacterial and Viral Bioinformatics Resource Center (BV-BRC): a resource combining PATRIC, IRD and ViPR , 2022, Nucleic Acids Res..
[8] M. Beer,et al. Iceland as Stepping Stone for Spread of Highly Pathogenic Avian Influenza Virus between Europe and North America , 2022, Emerging infectious diseases.
[9] M. Suchard,et al. SPREAD 4: online visualisation of pathogen phylogeographic reconstructions , 2022, Virus evolution.
[10] Pierre Bessière,et al. Controlling the emergence of highly pathogenic avian influenza viruses: one of the challenges of the 21st century? , 2022, Virologie.
[11] I. Brown,et al. A threat from both sides: Multiple introductions of genetically distinct H5 HPAI viruses into Canada via both East Asia-Australasia/Pacific and Atlantic flyways. , 2022, Virus evolution.
[12] Ruibang Luo,et al. Symphonizing pileup and full-alignment for deep learning-based long-read variant calling , 2021, bioRxiv.
[13] Heng Li,et al. New strategies to improve minimap2 alignment accuracy , 2021, Bioinform..
[14] Thomas M. Keane,et al. Twelve years of SAMtools and BCFtools , 2020, GigaScience.
[15] T. Kuiken,et al. Avian influenza overview August – December 2020 , 2020, EFSA journal. European Food Safety Authority.
[16] Olga Chernomor,et al. IQ-TREE 2: New Models and Efficient Methods for Phylogenetic Inference in the Genomic Era , 2019, bioRxiv.
[17] V. Bansal,et al. Longshot enables accurate variant calling in diploid genomes from single-molecule long read sequencing , 2019, Nature Communications.
[18] Daniel L. Ayres,et al. BEAGLE 3: Improved Performance, Scaling, and Usability for a High-Performance Computing Library for Statistical Phylogenetics , 2019, Systematic biology.
[19] M. Killian,et al. H7N6 Low Pathogenic Avian Influenza outbreak in commercial turkey farms in Chile caused by a native South American Lineage , 2019, bioRxiv.
[20] S. Pleschka,et al. Zoonotic Potential of Influenza A Viruses: A Comprehensive Overview , 2018, Viruses.
[21] S. Schultz-Cherry,et al. Circulation of influenza in backyard productive systems in central Chile and evidence of spillover from wild birds. , 2018, Preventive veterinary medicine.
[22] M. Suchard,et al. Posterior Summarization in Bayesian Phylogenetics Using Tracer 1.7 , 2018, Systematic biology.
[23] S. Schultz-Cherry,et al. Wild birds in Chile Harbor diverse avian influenza A viruses , 2018, Emerging Microbes & Infections.
[24] Wouter De Coster,et al. NanoPack: visualizing and processing long-read sequencing data , 2018, bioRxiv.
[25] Daniel L. Ayres,et al. Bayesian phylogenetic and phylodynamic data integration using BEAST 1.10 , 2018, Virus evolution.
[26] F. Pozo,et al. Identification of Rare PB2-D701N Mutation from a Patient with Severe Influenza: Contribution of the PB2-D701N Mutation to the Pathogenicity of Human Influenza , 2017, Front. Microbiol..
[27] S. Koren,et al. Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation , 2016, bioRxiv.
[28] Zi-feng Yang,et al. PB2-Q591K Mutation Determines the Pathogenicity of Avian H9N2 Influenza Viruses for Mammalian Species , 2016, PloS one.
[29] Xiaomei Li,et al. Influenza Research Database: An integrated bioinformatics resource for influenza virus research , 2016, Nucleic Acids Res..
[30] Eric J. Ma,et al. A point mutation in the polymerase protein PB2 allows a reassortant H9N2 influenza isolate of wild-bird origin to replicate in human cells. , 2016, Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases.
[31] Tiago J. S. Lopes,et al. Identification of mammalian-adapting mutations in the polymerase complex of an avian H5N1 influenza virus , 2015, Nature Communications.
[32] H. Klenk,et al. PB2 Mutations D701N and S714R Promote Adaptation of an Influenza H5N1 Virus to a Mammalian Host , 2014, Journal of Virology.
[33] H. Klenk,et al. Adaptive mutations in the H5N1 polymerase complex. , 2013, Virus research.
[34] K. Katoh,et al. MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability , 2013, Molecular biology and evolution.
[35] Daniel L. Ayres,et al. BEAGLE: An Application Programming Interface and High-Performance Computing Library for Statistical Phylogenetics , 2011, Systematic biology.
[36] A. García-Sastre,et al. Influenza A viruses: new research developments , 2011, Nature Reviews Microbiology.
[37] M. Suchard,et al. Phylogeography takes a relaxed random walk in continuous space and time. , 2010, Molecular biology and evolution.
[38] Steven J. M. Jones,et al. Circos: an information aesthetic for comparative genomics. , 2009, Genome research.
[39] Tatiana A. Tatusova,et al. FLAN: a web server for influenza virus genome annotation , 2007, Nucleic Acids Res..
[40] W. J. Kent,et al. BLAT--the BLAST-like alignment tool. , 2002, Genome research.
[41] X. Huang,et al. CAP3: A DNA sequence assembly program. , 1999, Genome research.