Peptides, DNA and MIPs in Gas Sensing. From the Realization of the Sensors to Sample Analysis

Detection and monitoring of volatiles is a challenging and fascinating issue in environmental analysis, agriculture and food quality, process control in industry, as well as in ‘point of care’ diagnostics. Gas chromatographic approaches remain the reference method for the analysis of volatile organic compounds (VOCs); however, gas sensors (GSs), with their advantages of low cost and no or very little sample preparation, have become a reality. Gas sensors can be used singularly or in array format (e.g., e-noses); coupling data output with multivariate statical treatment allows un-target analysis of samples headspace. Within this frame, the use of new binding elements as recognition/interaction elements in gas sensing is a challenging hot-topic that allowed unexpected advancement. In this review, the latest development of gas sensors and gas sensor arrays, realized using peptides, molecularly imprinted polymers and DNA is reported. This work is focused on the description of the strategies used for the GSs development, the sensing elements function, the sensors array set-up, and the application in real cases.

[1]  Marcos Dipinto,et al.  Discriminant analysis , 2020, Predictive Analytics.

[2]  Ali Yeon Md Shakaff,et al.  Array of MIP-Based Sensor for Fruit Maturity Assessment , 2012 .

[3]  G. Preti,et al.  Differentiation of complex vapor mixtures using versatile DNA-carbon nanotube chemical sensor arrays. , 2013, ACS nano.

[4]  R. Capuano,et al.  Solid-state gas sensors for breath analysis: a review. , 2014, Analytica chimica acta.

[5]  Nicole Jaffrezic-Renault,et al.  An overview of an artificial nose system. , 2018, Talanta.

[6]  Xinge Yu,et al.  DNA based chemical sensor for the detection of nitrogen dioxide enabled by organic field-effect transistor , 2016 .

[7]  Wolfgang Göpel,et al.  From electronic to bioelectronic olfaction, or: from artificial “moses” to real noses , 2000 .

[8]  T. Livache,et al.  Opto-Electronic Nose Coupled to a Silicon Micro Pre-Concentrator Device for Selective Sensing of Flavored Waters , 2020, Chemosensors.

[9]  Maryam Siadat,et al.  Orthogonal Signal Correction to Improve Stability Regression Model in Gas Sensor Systems , 2017, J. Sensors.

[10]  Bin Cai,et al.  One-Dimensional Nanostructure Field-Effect Sensors for Gas Detection , 2014, Sensors.

[11]  Pierre Comon,et al.  Reliable chiral recognition with an optoelectronic nose. , 2020, Biosensors & bioelectronics.

[12]  K. Persaud,et al.  Analysis of discrimination mechanisms in the mammalian olfactory system using a model nose , 1982, Nature.

[13]  Rachel M. Krabacher,et al.  Peptide-functionalized Single-walled Carbon Nanotube Field-effect Transistors for Monitoring Volatile Organic Compounds in Breath , 2019, 2019 IEEE International Flexible Electronics Technology Conference (IFETC).

[14]  Jin Zhang,et al.  Gas Sensors Based on Molecular Imprinting Technology , 2017, Sensors.

[15]  P. Pittia,et al.  Headspace Volatile Evaluation of Carrot Samples—Comparison of GC/MS and AuNPs-hpDNA-Based E-Nose , 2019, Foods.

[16]  Kengo Shimanoe,et al.  Fundamentals of semiconductor gas sensors , 2020, Semiconductor Gas Sensors.

[17]  S. Carradori,et al.  Comparison of IRMS, GC-MS and E-Nose data for the discrimination of saffron samples with different origin, process and age , 2019 .

[18]  R. Bandyopadhyay,et al.  Development of Furaneol Imprinted Polymer Based QCM sensor for Discrimination of Artificially and Naturally Ripened Mango , 2019, 2019 IEEE International Symposium on Olfaction and Electronic Nose (ISOEN).

[19]  Ricardo Gutierrez-Osuna,et al.  Pattern analysis for machine olfaction: a review , 2002 .

[20]  U. S. Dinish,et al.  Multiplex targeted in vivo cancer detection using sensitive near-infrared SERS nanotags , 2012 .

[21]  Sindhuja Sankaran,et al.  Olfactory receptor-based polypeptide sensor for acetic acid VOC detection. , 2012, Materials science & engineering. C, Materials for biological applications.

[22]  Tomasz Wasilewski,et al.  A Highly Selective Biosensor Based on Peptide Directly Derived from the HarmOBP7 Aldehyde Binding Site , 2019, Sensors.

[23]  Philip Drake,et al.  Real-time electronic nose based pathogen detection for respiratory intensive care patients , 2010 .

[24]  Ethan B. Russo Taming THC: potential cannabis synergy and phytocannabinoid‐terpenoid entourage effects , 2011, British journal of pharmacology.

[25]  Jinhuai Liu,et al.  Synthesis and application of DNA-templated silver nanowires for ammonia gas sensing , 2009 .

[26]  Hsin-Hsien Lu,et al.  Direct characterization and quantification of volatile organic compounds by piezoelectric module chips sensor , 2009 .

[27]  Y. Yoo,et al.  Single-carbon discrimination by selected peptides for individual detection of volatile organic compounds , 2015, Scientific Reports.

[28]  C. Di Natale,et al.  Evaluation of aroma release of gummy candies added with strawberry flavours by gas-chromatography/mass-spectrometry and gas sensors arrays , 2015 .

[29]  Masanobu Matsuguchi,et al.  Molecular imprinting strategy for solvent molecules and its application for QCM-based VOC vapor sensing , 2006 .

[30]  A. Roque,et al.  Protein- and Peptide-Based Biosensors in Artificial Olfaction. , 2018, Trends in biotechnology.

[31]  Tomasz Wasilewski,et al.  Evaluation of Three Peptide Immobilization Techniques on a QCM Surface Related to Acetaldehyde Responses in the Gas Phase , 2018, Sensors.

[32]  Amina Antonacci,et al.  Synthetic biology and biomimetic chemistry as converging technologies fostering a new generation of smart biosensors. , 2015, Biosensors & bioelectronics.

[33]  Linda B Buck,et al.  Unraveling the sense of smell (Nobel lecture). , 2005, Angewandte Chemie.

[34]  C. Di Natale,et al.  Peptide Modified ZnO Nanoparticles as Gas Sensors Array for Volatile Organic Compounds (VOCs) , 2018, Front. Chem..

[35]  Jinfeng Wang,et al.  Peptide-based biosensors. , 2015, Talanta.

[36]  Pere Caminal,et al.  Common principal component analysis for drift compensation of gas sensor array data , 2009 .

[37]  Peter A. Lieberzeit,et al.  QCM-Arrays for Sensing Terpenes in Fresh and Dried Herbs via Bio-Mimetic MIP Layers , 2010, Sensors.

[38]  R. Brenneisen Chemistry and Analysis of Phytocannabinoids and Other Cannabis Constituents , 2007 .

[39]  Tao Liu,et al.  Gas-Sensor Drift Counteraction with Adaptive Active Learning for an Electronic Nose , 2018, Sensors.

[40]  Arnaud Buhot,et al.  Bio-Inspired Strategies for Improving the Selectivity and Sensitivity of Artificial Noses: A Review , 2020, Sensors.

[41]  Peter A. Lieberzeit,et al.  Molecularly Imprinted Polymer Nanoparticles for Formaldehyde Sensing with QCM , 2016, Sensors.

[42]  X. D. Hoa,et al.  Towards integrated and sensitive surface plasmon resonance biosensors: a review of recent progress. , 2007, Biosensors & bioelectronics.

[43]  E. Kretschmann Die Bestimmung optischer Konstanten von Metallen durch Anregung von Oberflächenplasmaschwingungen , 1971 .

[44]  George Z. Kyzas,et al.  New trends in molecular imprinting techniques , 2019, Advanced Low-Cost Separation Techniques in Interface Science.

[45]  Jun Wang,et al.  Discrimination of wood borers infested Platycladus orientalis trunks using quartz crystal microbalance gas sensor array , 2020 .

[46]  Maxime Tarabichi,et al.  Profiling of Olfactory Receptor Gene Expression in Whole Human Olfactory Mucosa , 2014, PloS one.

[47]  Jie Chao,et al.  DNA nanotechnology-enabled biosensors. , 2016, Biosensors & bioelectronics.

[48]  Fajar Hardoyono,et al.  Identification of Bioactive Compounds in Ginger Based on Molecularly Imprinted Polymer Quartz Crystal Microbalance Gas Sensor , 2019, IOP Conference Series: Materials Science and Engineering.

[49]  Sindhuja Sankaran,et al.  Olfactory receptor based piezoelectric biosensors for detection of alcohols related to food safety applications , 2011 .

[50]  M. Shur,et al.  Selective gas sensing with a single pristine graphene transistor. , 2012, Nano letters.

[51]  Matti Kaisti,et al.  Detection principles of biological and chemical FET sensors. , 2017, Biosensors & bioelectronics.

[52]  Federico Berti,et al.  Short peptides as biosensor transducers , 2012, Analytical and Bioanalytical Chemistry.

[53]  R. Bandyopadhyay,et al.  Application of Polymethacrylic Acid Imprinted Quartz Crystal Microbalance Sensor for Detection of 3-Carene in Mango , 2018, IEEE Sensors Journal.

[54]  Ki-Hyun Kim,et al.  Nanomaterials as efficient platforms for sensing DNA. , 2019, Biomaterials.

[55]  Liang Feng,et al.  The fabrication and characterization of a formaldehyde odor sensor using molecularly imprinted polymers. , 2005, Journal of colloid and interface science.

[56]  L. B. Kish,et al.  High-Order Statistics for Fluctuation-Enhanced Gas Sensing , 2004 .

[57]  N. Miura,et al.  Recent advancements in surface plasmon resonance immunosensors for detection of small molecules of biomedical, food and environmental interest , 2007 .

[58]  Xiaowei Guo Surface plasmon resonance based biosensor technique: A review , 2012, Journal of biophotonics.

[59]  Antonella Macagnano,et al.  Metalloporphyrins as basic material for volatile sensitive sensors , 2000 .

[60]  Kerstin Länge,et al.  Bulk and Surface Acoustic Wave Sensor Arrays for Multi-Analyte Detection: A Review , 2019, Sensors.

[61]  Wojciech Kamysz,et al.  Advances in olfaction-inspired biomaterials applied to bioelectronic noses , 2018 .

[62]  R. Paolesse,et al.  Metalloporphyrins based artificial olfactory receptors , 2007 .

[63]  Julian W. Gardner,et al.  A brief history of electronic noses , 1994 .

[64]  D. G. Morrison,et al.  Bias in Multiple Discriminant Analysis , 1965 .

[65]  A. Otto Excitation of nonradiative surface plasma waves in silver by the method of frustrated total reflection , 1968 .

[66]  R. Paolesse,et al.  Chemical sensitivity of porphyrin assemblies , 2010 .

[67]  A. Gelperin,et al.  DNA-decorated carbon nanotube-based FETs as ultrasensitive chemical sensors: Discrimination of homologues, structural isomers, and optical isomers , 2012 .

[68]  Flavio Della Pelle,et al.  Affinity Sensing Strategies for the Detection of Pesticides in Food , 2018, Foods.

[69]  Antonella Macagnano,et al.  Characterization and design of porphyrins-based broad selectivity chemical sensors for electronic nose applications , 1998 .

[70]  Flavio Della Pelle,et al.  Nanomaterial-Based Sensing and Biosensing of Phenolic Compounds and Related Antioxidant Capacity in Food , 2018, Sensors.

[71]  Yanxia Hou,et al.  Development of an optoelectronic nose based on surface plasmon resonance imaging with peptide and hairpin DNA for sensing volatile organic compounds , 2020, Sensors and Actuators B: Chemical.

[72]  Bartosz Szulczyński,et al.  Determination of long-chain aldehydes using a novel quartz crystal microbalance sensor based on a biomimetic peptide , 2020 .

[73]  K. Hayashi,et al.  Polyacrylic acid polymer and aldehydes template molecule based MIPs coated QCM sensors for detection of pattern aldehydes in body odor , 2015 .

[74]  Thierry Livache,et al.  Highly-Selective Optoelectronic Nose Based on Surface Plasmon Resonance Imaging for Sensing Volatile Organic Compounds. , 2018, Analytical chemistry.

[75]  Jessica E Fitzgerald,et al.  Artificial Nose Technology: Status and Prospects in Diagnostics. , 2017, Trends in biotechnology.

[76]  Paolo Pelosi,et al.  From Gas Sensors to Biomimetic Artificial Noses , 2018, Chemosensors.

[77]  Khalil Arshak,et al.  A review of gas sensors employed in electronic nose applications , 2004 .

[78]  Malini Olivo,et al.  Surface Plasmon Resonance Imaging Sensors: A Review , 2014, Plasmonics.

[79]  Sergey A Piletsky,et al.  Molecularly Imprinted Polymers in Electrochemical and Optical Sensors. , 2019, Trends in biotechnology.

[80]  A. Gutierrez-Galvez,et al.  Signal and Data Processing for Machine Olfaction and Chemical Sensing: A Review , 2012, IEEE Sensors Journal.

[81]  K. Hayashi,et al.  Molecular imprinted polyacrylic acids based QCM sensor array for recognition of organic acids in body odor , 2014 .

[82]  Giovanna Marrazza,et al.  Electrochemical and piezoelectric DNA biosensors for hybridisation detection. , 2008, Analytica chimica acta.

[83]  R. Fisher THE STATISTICAL UTILIZATION OF MULTIPLE MEASUREMENTS , 1938 .

[84]  T. Abaffy Human Olfactory Receptors Expression and Their Role in Non-Olfactory Tissues A Mini-Review , 2015 .

[85]  M. A. Otte,et al.  Trends and challenges of refractometric nanoplasmonic biosensors: a review. , 2014, Analytica chimica acta.

[86]  Corrado Di Natale,et al.  Monitoring Shelf Life of Carrots with a Peptides Based Electronic Nose , 2018, Sensors.

[87]  C Di Natale,et al.  Gold nanoparticles-peptide based gas sensor arrays for the detection of food aromas. , 2013, Biosensors & bioelectronics.

[88]  D. Compagnone,et al.  Study on volatile markers of pasta quality using GC-MS and a peptide based gas sensor array , 2019, LWT.

[89]  Milan Vala,et al.  Compact surface plasmon-enhanced fluorescence biochip. , 2013, Optics express.

[90]  Yuh-Jiuan Lin,et al.  Application of the electronic nose for uremia diagnosis , 2001 .

[91]  Corrado Di Natale,et al.  Selection of peptide ligands for piezoelectric peptide based gas sensors arrays using a virtual screening approach. , 2014, Biosensors & bioelectronics.

[92]  S. Scarano,et al.  Silver nanoparticles-based plasmonic assay for the determination of sugar content in food matrices. , 2019, Analytica chimica acta.

[93]  R. Wood,et al.  On a Remarkable Case of Uneven Distribution of Light in a Diffraction Grating Spectrum , 1902 .

[94]  D. Compagnone,et al.  Piezoelectric peptide-hpDNA based electronic nose for the detection of terpenes; Evaluation of the aroma profile in different Cannabis sativa L. (hemp) samples , 2020 .

[95]  Abbes Amira,et al.  Hardware PCA for gas identification systems using high level synthesis on the Zynq SoC , 2013, 2013 IEEE 20th International Conference on Electronics, Circuits, and Systems (ICECS).

[96]  Pere Caminal,et al.  Drift Compensation of Gas Sensor Array Data by Common Principal Component Analysis , 2010 .

[97]  Zulfiqur Ali,et al.  Chemical Sensors for Electronic Nose Systems , 2005 .

[98]  M. Pohanka The Piezoelectric Biosensors: Principles and Applications, a Review , 2017 .

[99]  José M. Pingarrón,et al.  Hairpin DNA-AuNPs as molecular binding elements for the detection of volatile organic compounds. , 2019, Biosensors & bioelectronics.

[100]  Muhammad Imran Malik,et al.  Recent Applications of Molecularly Imprinted Polymers in Analytical Chemistry , 2019 .

[101]  Vilho Lantto,et al.  Measurements of odours based on response analysis of insect olfactory receptor neurons , 2007 .

[102]  Germán M Pérez,et al.  Tailoring gas sensor arrays via the design of short peptides sequences as binding elements. , 2017, Biosensors & bioelectronics.

[103]  L. Du,et al.  Bioengineered olfactory sensory neuron-based biosensor for specific odorant detection. , 2013, Biosensors & bioelectronics.

[104]  Anthony Nicholls,et al.  Conformer Generation with OMEGA: Learning from the Data Set and the Analysis of Failures , 2012, J. Chem. Inf. Model..

[105]  Masashi Kikuchi,et al.  Recognition of terpenes using molecular imprinted polymer coated quartz crystal microbalance in air phase , 2006 .

[106]  T. Livache,et al.  Optical Index Prism Sensitivity of Surface Plasmon Resonance Imaging in Gas Phase: Experiment versus Theory , 2020, The Journal of Physical Chemistry C.

[107]  M. Olivo,et al.  Pluronic Triblock Copolymer Encapsulated Gold Nanorods as Biocompatible Localized Plasmon Resonance-Enhanced Scattering Probes for Dark-Field Imaging of Cancer Cells , 2012, Plasmonics.

[108]  Ibrahim Abdulhalim,et al.  Surface Plasmon Resonance for Biosensing: A Mini-Review , 2008 .

[109]  Usman Latif,et al.  Sauerbrey and anti-Sauerbrey behavioral studies in QCM sensors—Detection of bioanalytes , 2013 .