Modeling Symmetric Macromolecular Structures in Rosetta3
暂无分享,去创建一个
David Baker | Andrew Leaver-Fay | Frank DiMaio | Phil Bradley | Ingemar André | P. Bradley | D. Baker | I. André | A. Leaver-Fay | F. DiMaio | D. Baker | Andrew Leaver-Fay | D. Baker
[1] K Fidelis,et al. A large‐scale experiment to assess protein structure prediction methods , 1995, Proteins.
[2] David Baker,et al. Improved beta‐protein structure prediction by multilevel optimization of nonlocal strand pairings and local backbone conformation , 2006, Proteins.
[3] Jens Meiler,et al. ROSETTA3: an object-oriented software suite for the simulation and design of macromolecules. , 2011, Methods in enzymology.
[4] D. Baker,et al. Simultaneous prediction of protein folding and docking at high resolution , 2009, Proceedings of the National Academy of Sciences.
[5] W. Braun,et al. Rapid calculation of first and second derivatives of conformational energy with respect to dihedral angles for proteins general recurrent equations , 1984, Comput. Chem..
[6] D. Baker,et al. Native protein sequences are close to optimal for their structures. , 2000, Proceedings of the National Academy of Sciences of the United States of America.
[7] Oliver F. Lange,et al. Determination of the Structures of Symmetric Protein Oligomers from NMR Chemical Shifts and Residual Dipolar Couplings , 2011, Journal of the American Chemical Society.
[8] David Baker,et al. Protein-protein docking with backbone flexibility. , 2007, Journal of molecular biology.
[9] Niles A Pierce,et al. Protein design is NP-hard. , 2002, Protein engineering.
[10] David Baker,et al. Prediction of the structure of symmetrical protein assemblies , 2007, Proceedings of the National Academy of Sciences.
[11] Jack Snoeyink,et al. Rotamer-Pair Energy Calculations Using a Trie Data Structure , 2005, WABI.
[12] J. Ponder,et al. Tertiary templates for proteins. Use of packing criteria in the enumeration of allowed sequences for different structural classes. , 1987, Journal of molecular biology.