Life in blue: copper resistance mechanisms of bacteria and archaea used in industrial biomining of minerals.
暂无分享,去创建一个
J. Mobarec | C. Navarro | Alvaro Orell | A. Orell | Rafaela Arancibia | C. Jerez | Claudio A Navarro | Rafaela Arancibia | Juan C Mobarec | Carlos A Jerez
[1] E. Bini,et al. Response to excess copper in the hyperthermophile Sulfolobus solfataricus strain 98/2. , 2009, Biochemical and biophysical research communications.
[2] V. Harwood,et al. Regulation of extracellular copper-binding proteins in copper-resistant and copper-sensitive mutants of Vibrio alginolyticus , 1994, Applied and environmental microbiology.
[3] C. Rensing,et al. Escherichia coli mechanisms of copper homeostasis in a changing environment. , 2003, FEMS microbiology reviews.
[4] K B Hallberg,et al. Biodiversity of acidophilic prokaryotes. , 2001, Advances in applied microbiology.
[5] O. Carmel-Harel,et al. Roles of the glutathione- and thioredoxin-dependent reduction systems in the Escherichia coli and saccharomyces cerevisiae responses to oxidative stress. , 2000, Annual review of microbiology.
[6] K. Stetter,et al. Metallosphaera sedula gen, and sp. nov. Represents a New Genus of Aerobic, Metal-Mobilizing, Thermoacidophilic Archaebacteria , 1989 .
[7] J. Keasling. Regulation of Intracellular Toxic Metals and Other Cations by Hydrolysis of Polyphosphate , 1997, Annals of the New York Academy of Sciences.
[8] P. Rich,et al. Two Menkes-type ATPases Supply Copper for Photosynthesis inSynechocystis PCC 6803* , 2001, The Journal of Biological Chemistry.
[9] F. A. Perrot,et al. Metals tolerance in moderately thermophilic isolates from a spent copper sulfide heap, closely related to Acidithiobacillus caldus, Acidimicrobium ferrooxidans and Sulfobacillus thermosulfidooxidans , 2009, Journal of Industrial Microbiology & Biotechnology.
[10] J. Imlay. Cellular defenses against superoxide and hydrogen peroxide. , 2008, Annual review of biochemistry.
[11] H. Hippe. Leptospirillum gen. nov. (ex Markosyan 1972), nom. rev., including Leptospirillum ferrooxidans sp. nov. (ex Markosyan 1972), nom. rev. and Leptospirillum thermoferrooxidans sp. nov. (Golovacheva et al. 1992). , 2000, International journal of systematic and evolutionary microbiology.
[12] M. Maher,et al. Intermolecular transfer of copper ions from the CopC protein of Pseudomonas syringae. Crystal structures of fully loaded Cu(I)Cu(II) forms. , 2006, Journal of the American Chemical Society.
[13] C. Rensing,et al. Molecular Analysis of the Copper-Transporting Efflux System CusCFBA of Escherichia coli , 2003, Journal of bacteriology.
[14] Jillian F Banfield,et al. Microbial communities in acid mine drainage. , 2003, FEMS microbiology ecology.
[15] D. Holmes,et al. Aspects of the predicted physiology of Acidithiobacillus ferrooxidans deduced from an analysis of its partial genome sequence , 2003 .
[16] D. Rawlings,et al. Molecular Relationship between Two Groups of the Genus Leptospirillum and the Finding that Leptospirillum ferriphilum sp. nov. Dominates South African Commercial Biooxidation Tanks That Operate at 40°C , 2002, Applied and Environmental Microbiology.
[17] Chi‐Huey Wong,et al. The antioxidant protein alkylhydroperoxide reductase of Helicobacter pylori switches from a peroxide reductase to a molecular chaperone function. , 2006, Proceedings of the National Academy of Sciences of the United States of America.
[18] G. Olson,et al. Bioleaching review part B: progress in bioleaching: applications of microbial processes by the minerals industries. , 2003, Applied microbiology and biotechnology.
[19] M. McEvoy,et al. A novel copper-binding fold for the periplasmic copper resistance protein CusF. , 2005, Biochemistry.
[20] E. Pedone,et al. Sensing and adapting to environmental stress: the archaeal tactic. , 2004, Frontiers in bioscience : a journal and virtual library.
[21] M. Solioz,et al. How Bacteria Handle Copper , 2007 .
[22] S. Silver,et al. Bacterial heavy metal resistance: new surprises. , 1996, Annual review of microbiology.
[23] C. Baker-Austin,et al. Growth in sulfidic mineral environments: metal resistance mechanisms in acidophilic micro-organisms. , 2003, Microbiology.
[24] C. Jerez,et al. Proteomic and genomic analysis of the phosphate starvation response of Acidithiobacillus ferrooxidans , 2003 .
[25] W. Sand,et al. Bioleaching review part A: , 2003, Applied Microbiology and Biotechnology.
[26] M. Parsek,et al. Survival and Growth in the Presence of Elevated Copper: Transcriptional Profiling of Copper-Stressed Pseudomonas aeruginosa , 2006, Journal of bacteriology.
[27] C. Baker-Austin,et al. Life in acid: pH homeostasis in acidophiles. , 2007, Trends in microbiology.
[28] M. Solioz,et al. Copper homeostasis in Enterococcus hirae. , 1999, Advances in experimental medicine and biology.
[29] L. Orellana,et al. Transcriptional and Functional Studies of Acidithiobacillus ferrooxidans Genes Related to Survival in the Presence of Copper , 2009, Applied and Environmental Microbiology.
[30] J. Robison-Cox,et al. Something Old, Something New, Something Borrowed; How the Thermoacidophilic Archaeon Sulfolobus solfataricus Responds to Oxidative Stress , 2009, PloS one.
[31] P. Norris,et al. Characteristics of Sulfobacillus acidophilus sp. nov. and other moderately thermophilic mineral-sulphide-oxidizing bacteria. , 1996, Microbiology.
[32] D. Rawlings,et al. Characteristics and adaptability of iron- and sulfur-oxidizing microorganisms used for the recovery of metals from minerals and their concentrates , 2005, Microbial cell factories.
[33] S. Farr,et al. Oxidative stress responses in Escherichia coli and Salmonella typhimurium. , 1991, Microbiological reviews.
[34] M. Nakasako,et al. Crystal structure of the calcium pump of sarcoplasmic reticulum at 2.6 Å resolution , 2000, Nature.
[35] T. O’Halloran,et al. Cu(I) recognition via cation-pi and methionine interactions in CusF. , 2008, Nature chemical biology.
[36] K. Stetter,et al. Metallosphaera prunae, sp. nov., a novel metal-mobilizing, thermoacidophilic Archaeum, isolated from a uranium mine in Germany , 1995 .
[37] M. Seufferheld,et al. Role of Polyphosphates in Microbial Adaptation to Extreme Environments , 2008, Applied and Environmental Microbiology.
[38] D. Kelly,et al. Reclassification of some species of Thiobacillus to the newly designated genera Acidithiobacillus gen. nov., Halothiobacillus gen. nov. and Thermithiobacillus gen. nov. , 2000, International journal of systematic and evolutionary microbiology.
[39] K. Stetter,et al. 16S rDNA-based Phylogeny of the Archaeal Order Sulfolobales and Reclassification of Desulfurolobus a , 1996 .
[40] J. Mobarec,et al. Identification of putative sulfurtransferase genes in the extremophilic Acidithiobacillus ferrooxidans ATCC 23270 genome: structural and functional characterization of the proteins. , 2005, Omics : a journal of integrative biology.
[41] R. Siezen,et al. Bioleaching genomics , 2009, Microbial biotechnology.
[42] Helen R. Watling,et al. The bioleaching of sulphide minerals with emphasis on copper sulphides — A review , 2006 .
[43] K. Timmis,et al. Ferroplasma acidiphilum gen. nov., sp. nov., an acidophilic, autotrophic, ferrous-iron-oxidizing, cell-wall-lacking, mesophilic member of the Ferroplasmaceae fam. nov., comprising a distinct lineage of the Archaea. , 2000, International journal of systematic and evolutionary microbiology.
[44] J. Cha,et al. Copper Hypersensitivity and Uptake in Pseudomonas syringae Containing Cloned Components of the Copper Resistance Operon , 1993, Applied and environmental microbiology.
[45] S. K. Ward,et al. The Global Responses of Mycobacterium tuberculosis to Physiological Levels of Copper , 2008, Journal of bacteriology.
[46] N. Kurosawa,et al. Sulfurisphaera ohwakuensis gen. nov., sp. nov., a novel extremely thermophilic acidophile of the order Sulfolobales. , 1998, International journal of systematic bacteriology.
[47] T. Blundell,et al. Comparative protein modelling by satisfaction of spatial restraints. , 1993, Journal of molecular biology.
[48] J. Banfield,et al. An archaeal iron-oxidizing extreme acidophile important in acid mine drainage. , 2000, Science.
[49] A. Scaloni,et al. Redox stress proteins are involved in adaptation response of the hyperthermoacidophilic archaeon Sulfolobus solfataricus to nickel challenge , 2007, Microbial cell factories.
[50] Ruiping Huang,et al. Novel components and enzymatic activities of the human erythrocyte plasma membrane calcium pump , 1997, FEBS letters.
[51] Thomas V. O'Halloran,et al. The Independent cue and cusSystems Confer Copper Tolerance during Aerobic and Anaerobic Growth inEscherichia coli * , 2001, The Journal of Biological Chemistry.
[52] W. Konings,et al. Energetics of alanine, lysine, and proline transport in cytoplasmic membranes of the polyphosphate-accumulating Acinetobacter johnsonii strain 210A , 1994, Journal of bacteriology.
[53] D. Eisenberg,et al. Assessment of protein models with three-dimensional profiles , 1992, Nature.
[54] F. Acevedo,et al. Adaptation of Sulfolobus metallicus to high pulp densities in the biooxidation of a flotation gold concentrate , 2008 .
[55] Arthur Kornberg,et al. Inorganic polyphosphate: essential for growth and survival. , 2009, Annual review of biochemistry.
[56] S. Harrison,et al. Sulfide Mineral Induced Oxidative Stress as a Limiting Factor in Tank Bioleaching Performance , 2009 .
[57] T. O’Halloran,et al. Transcriptional Activation of an Escherichia coliCopper Efflux Regulon by the Chromosomal MerR Homologue, CueR* , 2000, The Journal of Biological Chemistry.
[58] S. Waksman,et al. MICROÖRGANISMS CONCERNED IN THE OXIDATION OF SULFUR IN THE SOIL II. THIOBACILLUS THIOOXIDANS, A NEW SULFUR-OXIDIZING ORGANISM ISOLATED FROM THE SOIL , 1922, Journal of bacteriology.
[59] F. Crundwell,et al. The effect of As(III) on the growth of Thiobacillus ferrooxidans in an electrolytic cell under controlled redox potentials , 1996 .
[60] A. Kornberg,et al. Polyphosphate kinase is highly conserved in many bacterial pathogens , 1998, Molecular microbiology.
[61] Vivien Lowndes,et al. SOMETHING OLD, SOMETHING NEW, SOMETHING BORROWED … , 2005 .
[62] R. Kelly,et al. Life in hot acid: pathway analyses in extremely thermoacidophilic archaea. , 2008, Current opinion in biotechnology.
[63] C. Rensing,et al. CopA: An Escherichia coli Cu(I)-translocating P-type ATPase. , 2000, Proceedings of the National Academy of Sciences of the United States of America.
[64] J. Kristjánsson,et al. Acidianus infernus gen. nov., sp. nov., and Acidianus brierleyi Comb. nov.: Facultatively Aerobic, Extremely Acidophilic Thermophilic Sulfur-Metabolizing Archaebacteria , 1986 .
[65] A. Schippers. MICROORGANISMS INVOLVED IN BIOLEACHING AND NUCLEIC ACID-BASED MOLECULAR METHODS FOR THEIR IDENTIFICATION AND QUANTIFICATION , 2007 .
[66] D. Nies. Bacterial Transition Metal Homeostasis , 2007 .
[67] S. Wold,et al. Optimization of pyrite bioleaching using Sulfolobus acidocaldarius , 1993, Applied Microbiology and Biotechnology.
[68] N. Glansdorff,et al. Physiology and biochemistry of extremophiles. , 2007 .
[69] J. Modak,et al. Surface chemical studies of Thiobacillus ferrooxidans with reference to copper tolerance , 1998, Antonie van Leeuwenhoek.
[70] S. Waksman. MICROÖRGANISMS CONCERNED IN THE OXIDATION OF SULFUR IN THE SOIL: III. MEDIA USED FOR THE ISOLATION OF SULFUR BACTERIA FROM THE SOIL , 1922 .
[71] W. Sand,et al. Physiological characteristics of thiobacillus ferrooxidans and leptospirillum ferrooxidans and physicochemical factors influence microbial metal leaching , 1992 .
[72] M. de Mello,et al. Differential gene expression in response to copper in Acidithiobacillus ferrooxidans analyzed by RNA arbitrarily primed polymerase chain reaction , 2002, Electrophoresis.
[73] Inti Pedroso,et al. Bioinformatic prediction and experimental verification of Fur-regulated genes in the extreme acidophile Acidithiobacillus ferrooxidans , 2007, Nucleic acids research.
[74] C. Rensing,et al. Acidophiles: Mechanisms To Tolerate Metal and Acid Toxicity , 2007 .
[75] Francisco P. Chávez,et al. The Exopolyphosphatase Gene from Sulfolobus solfataricus: Characterization of the First Gene Found To Be Involved in Polyphosphate Metabolism in Archaea , 2002, Applied and Environmental Microbiology.
[76] K. Waldron,et al. How do bacterial cells ensure that metalloproteins get the correct metal? , 2009, Nature Reviews Microbiology.
[77] E. Pedone,et al. Peroxiredoxins as cellular guardians in Sulfolobus solfataricus– characterization of Bcp1, Bcp3 and Bcp4 , 2008, The FEBS journal.
[78] P. Norris,et al. Acidimicrobium ferrooxidans gen. nov., sp. nov.: mixed-culture ferrous iron oxidation with Sulfobacillus species. , 1996, Microbiology.
[79] Thijs J. G. Ettema,et al. Molecular characterization of a conserved archaeal copper resistance (cop) gene cluster and its copper-responsive regulator in Sulfolobus solfataricus P2. , 2006, Microbiology.
[80] M. McEvoy,et al. Unusual Cu(I)/Ag(I) coordination of Escherichia coli CusF as revealed by atomic resolution crystallography and X‐ray absorption spectroscopy , 2007, Protein science : a publication of the Protein Society.
[81] Wolfgang Sand,et al. Microbial Processing of Metal Sulfides , 2007 .
[82] Hehuan Liao,et al. Insights into Two High Homogenous Genes Involved in Copper Homeostasis in Acidithiobacillus ferrooxidans , 2008, Current Microbiology.
[83] I. A. Chisholm,et al. Metal resistance and plasmid DNA in Thiobacillus ferrooxidans , 1998, Antonie van Leeuwenhoek.
[84] D. Thiele,et al. The ABCDs of periplasmic copper trafficking. , 2002, Structure.
[85] C. Vulpe,et al. CPx-type ATPases: a class of P-type ATPases that pump heavy metals. , 1996, Trends in biochemical sciences.
[86] J. Shabanowitz,et al. Periplasmic Proteins of the Extremophile Acidithiobacillus ferrooxidans , 2007, Molecular & Cellular Proteomics.
[87] Thijs J G Ettema,et al. TRASH: a novel metal-binding domain predicted to be involved in heavy-metal sensing, trafficking and resistance. , 2003, Trends in biochemical sciences.
[88] F W Oehme,et al. Microbial resistance to metals in the environment. , 2000, Ecotoxicology and environmental safety.
[89] B. Persson,et al. Studies of cytochrome c oxidase-driven H(+)-coupled phosphate transport catalyzed by the Saccharomyces cerevisiae Pho84 permease in coreconstituted vesicles. , 1999, Biochemistry.
[90] Carlos A. Jerez,et al. Copper Ions Stimulate Polyphosphate Degradation and Phosphate Efflux in Acidithiobacillus ferrooxidans , 2004, Applied and Environmental Microbiology.
[91] E. Cabiscol,et al. Oxidative stress in bacteria and protein damage by reactive oxygen species. , 2000, International microbiology : the official journal of the Spanish Society for Microbiology.
[92] C. Baker-Austin,et al. Molecular insight into extreme copper resistance in the extremophilic archaeon 'Ferroplasma acidarmanus' Fer1. , 2005, Microbiology.
[93] C. Jerez. The use of genomics, proteomics and other OMICS technologies for the global understanding of biomining microorganisms , 2008 .
[94] O. Tuovinen,et al. Bacterial Oxidation of Refractory Sulfide Ores for Gold Recovery , 1992 .
[95] A. Orell,et al. Copper tolerance of the thermoacidophilic archaeon Sulfolobus metallicus: possible role of polyphosphate metabolism. , 2006, Microbiology.
[96] D. Reyon,et al. Crystal structure of the membrane fusion protein CusB from Escherichia coli. , 2009, Journal of molecular biology.
[97] P. Blum,et al. The Genome Sequence of the Metal-Mobilizing, Extremely Thermoacidophilic Archaeon Metallosphaera sedula Provides Insights into Bioleaching-Associated Metabolism , 2007, Applied and Environmental Microbiology.
[98] D. Hunt,et al. Genomics, metagenomics and proteomics in biomining microorganisms. , 2006, Biotechnology advances.
[99] A. Kornberg,et al. Inorganic polyphosphate: a molecule of many functions. , 1999, Progress in molecular and subcellular biology.
[100] P. Norris,et al. Acidophiles in bioreactor mineral processing , 2000, Extremophiles.