Complete genome sequence of Conexibacter woesei type strain ( ID 131577 T )

Rüdiger Pukall, Alla Lapidus, Tijana Glavina Del Rio, Alex Copeland, Hope Tice, JanFang Cheng, Susan Lucas, Feng Chen, Matt Nolan, David Bruce, Lynne Goodwin, Sam Pitluck, Konstantinos Mavromatis, Natalia Ivanova, Galina Ovchinnikova, Amrita Pati, Amy Chen, Krishna Palaniappan, Miriam Land, Loren Hauser, Yun-Juan Chang, Cynthia D. Jeffries, Patrick Chain, Linda Meincke, David Sims,Thomas Brettin, John C. Detter, Manfred Rohde, Markus Göker, Jim Bristow, Jonathan A. Eisen, Victor Markowitz, Nikos C. Kyrpides, Hans-Peter Klenk, and Philip Hugenholtz

[1]  G. Garrity,et al.  The Road Map to the Manual , 2015 .

[2]  I-Min A. Chen,et al.  The Genomes On Line Database (GOLD) in 2007: status of genomic and metagenomic projects and their associated metadata , 2007, Nucleic Acids Res..

[3]  Natalia N. Ivanova,et al.  A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea , 2009, Nature.

[4]  S. Hallam,et al.  Bacterial, archaeal and eukaryal community structures throughout soil horizons of harvested and naturally disturbed forest stands. , 2009, Environmental microbiology.

[5]  Leah M. Feazel,et al.  Opportunistic pathogens enriched in showerhead biofilms , 2009, Proceedings of the National Academy of Sciences.

[6]  I-Min A. Chen,et al.  IMG ER: a system for microbial genome annotation expert review and curation , 2009, Bioinform..

[7]  Lynne A. Goodwin,et al.  Complete genome sequence of Kytococcus sedentarius type strain (541T) , 2009, Standards in genomic sciences.

[8]  E. Stackebrandt,et al.  An update of the structure and 16S rRNA gene sequence-based definition of higher ranks of the class Actinobacteria, with the proposal of two new suborders and four new families and emended descriptions of the existing higher taxa. , 2009, International journal of systematic and evolutionary microbiology.

[9]  F. Garcia-Pichel,et al.  Description of Patulibacter americanus sp. nov., isolated from biological soil crusts, emended description of the genus Patulibacter Takahashi et al. 2006 and proposal of Solirubrobacterales ord. nov. and Thermoleophilales ord. nov. , 2009, International journal of systematic and evolutionary microbiology.

[10]  Lynne A. Goodwin,et al.  Complete genome sequence of Kytococcus sedentarius type strain (541 T ) , 2009 .

[11]  J. Rougemont,et al.  A rapid bootstrap algorithm for the RAxML Web servers. , 2008, Systematic biology.

[12]  T. Naganuma,et al.  The development of Fe-nodules surrounding biological material mediated by microorganisms , 2008 .

[13]  Chris F. Taylor,et al.  The minimum information about a genome sequence (MIGS) specification , 2008, Nature Biotechnology.

[14]  N. Pace,et al.  Molecular identification of bacteria in bronchoalveolar lavage fluid from children with cystic fibrosis , 2007, Proceedings of the National Academy of Sciences.

[15]  J. González-Pastor,et al.  Novel Nickel Resistance Genes from the Rhizosphere Metagenome of Plants Adapted to Acid Mine Drainage , 2007, Applied and Environmental Microbiology.

[16]  F. Garcia-Pichel,et al.  The Community and Phylogenetic Diversity of Biological Soil Crusts in the Colorado Plateau Studied by Molecular Fingerprinting and Intensive Cultivation , 2006, Microbial Ecology.

[17]  W. Stafford,et al.  Bacterial Diversity in Three Different Antarctic Cold Desert Mineral Soils , 2006, Microbial Ecology.

[18]  W. Liesack,et al.  Phylogenetic Analysis and In Situ Identification of Bacteria Community Composition in an Acidic Sphagnum Peat Bog , 2006, Applied and Environmental Microbiology.

[19]  J. Bowman,et al.  Salmonid gill bacteria and their relationship to amoebic gill disease. , 2004, Journal of fish diseases.

[20]  E. Stackebrandt Will we ever understand? The undescribable diversity of the prokaryotes. , 2004, Acta microbiologica et immunologica Hungarica.

[21]  M. Rohde,et al.  Conexibacter woesei gen. nov., sp. nov., a novel representative of a deep evolutionary line of descent within the class Actinobacteria. , 2003, International journal of systematic and evolutionary microbiology.

[22]  W. Whitman,et al.  Solirubrobacter pauli gen. nov., sp. nov., a mesophilic bacterium within the Rubrobacteridae related to common soil clones. , 2003, International journal of systematic and evolutionary microbiology.

[23]  Christopher J. Lee,et al.  Multiple sequence alignment using partial order graphs , 2002, Bioinform..

[24]  M. Ashburner,et al.  Gene Ontology: tool for the unification of biology , 2000, Nature Genetics.

[25]  Wei Qian,et al.  Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. , 2000, Molecular biology and evolution.

[26]  E. Stackebrandt,et al.  Proposal for a New Hierarchic Classification System, Actinobacteria classis nov. , 1997 .

[27]  O. Kandler,et al.  Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya. , 1990, Proceedings of the National Academy of Sciences of the United States of America.