A class of asymptotically optimal group screening strategies with limited item participation

Abstract In many fault-detection problems, we want to identify defective items from a set of n items using the minimum number of tests. Group testing is a scenario in which each test is on a subset of items and determines whether the subset contains at least one defective item. We study a variant of the classical group testing problem with an unknown number of defective items, in which each item participates in no more than a fixed number of tests. Besides being interesting on its own right, investigating the above problem provides an approach to tackle another variant of the group testing problem with an unknown number of defective items, in which the number of positive responses is limited. For the latter problem, existing works all assume that the number of defective items d is known in advance. However, in practice d is usually unknown. For both the above two group testing problems with unknown number of defective items, based on previous work in De Bonis (2016), we give a conditional lower bound on the number of tests required in the worst case. Our main contribution is proposing a class of recursive testing strategies A f for integers f ≥ 1 , such that for strategy A f each item participates in at most f tests. For constant f , strategy A f is asymptotically optimal for both the above two problems, as long as the lower bound condition n ≥ 2 2 f d holds.

[1]  B S Pasternack,et al.  Application of group testing procedures in radiological health. , 1973, Health physics.

[2]  Lawrence M. Wein,et al.  Pooled Testing for HIV Screening: Capturing the Dilution Effect , 2018, Oper. Res..

[3]  Richard E. Ladner,et al.  Group testing for image compression , 2002, IEEE Trans. Image Process..

[4]  Annalisa De Bonis,et al.  Optimal Algorithms for Two Group Testing Problems, and New Bounds on Generalized Superimposed Codes , 2006, IEEE Transactions on Information Theory.

[5]  D. Du,et al.  Combinatorial Group Testing and Its Applications , 1993 .

[6]  Chou Hsiung Li A Sequential Method for Screening Experimental Variables , 1962 .

[7]  Herwig Bruneel,et al.  A queueing model for general group screening policies and dynamic item arrivals , 2010, Eur. J. Oper. Res..

[8]  Annalisa De Bonis,et al.  An Almost Optimal Algorithm for Generalized Threshold Group Testing with Inhibitors , 2011, J. Comput. Biol..

[9]  Peter Damaschke Adaptive group testing with a constrained number of positive responses improved , 2016, Discret. Appl. Math..

[10]  Siu-Ming Yiu,et al.  Non-adaptive Complex Group Testing with Multiple Positive Sets , 2011, TAMC.

[11]  R. Dorfman The Detection of Defective Members of Large Populations , 1943 .

[12]  My T. Thai Group Testing Theory in Network Security: An Advanced Solution , 2011 .

[13]  Jack K. Wolf,et al.  Born again group testing: Multiaccess communications , 1985, IEEE Trans. Inf. Theory.

[14]  Peter Damaschke Randomized Group Testing for Mutually Obscuring Defectives , 1998, Inf. Process. Lett..

[15]  M. Sobel,et al.  Group testing to eliminate efficiently all defectives in a binomial sample , 1959 .

[16]  D. Bohning,et al.  Group-Sequential Leak-Testing of Sealed Radium Sources , 1976 .

[17]  Wolfgang Stadje,et al.  Applications of bulk queues to group testing models with incomplete identification , 2007, Eur. J. Oper. Res..

[18]  L. Wein,et al.  Pooled testing for HIV prevalence estimation: exploiting the dilution effect. , 2015, Statistics in medicine.

[19]  Eberhard Triesch,et al.  Two New Perspectives on Multi-Stage Group Testing , 2013, Algorithmica.

[20]  Peter Damaschke,et al.  Optimal group testing algorithms with interval queries and their application to splice site detection , 2005, Int. J. Bioinform. Res. Appl..

[21]  Annalisa De Bonis,et al.  Constructions of generalized superimposed codes with applications to group testing and conflict resolution in multiple access channels , 2003, Theor. Comput. Sci..

[22]  Annalisa De Bonis Constraining the number of positive responses in adaptive, non-adaptive, and two-stage group testing , 2015, Journal of Combinatorial Optimization.

[23]  Rudolf Ahlswede,et al.  Threshold and Majority Group Testing , 2013, Information Theory, Combinatorics, and Search Theory.