Complete hierarchies of SIR models on arbitrary networks with exact and approximate moment closure.

We first generalise ideas discussed by Kiss et al. (2015) to prove a theorem for generating exact closures (here expressing joint probabilities in terms of their constituent marginal probabilities) for susceptible-infectious-removed (SIR) dynamics on arbitrary graphs (networks). For Poisson transmission and removal processes, this enables us to obtain a systematic reduction in the number of differential equations needed for an exact 'moment closure' representation of the underlying stochastic model. We define 'transmission blocks' as a possible extension of the block concept in graph theory and show that the order at which the exact moment closure representation is curtailed is the size of the largest transmission block. More generally, approximate closures of the hierarchy of moment equations for these dynamics are typically defined for the first and second order yielding mean-field and pairwise models respectively. It is frequently implied that, in principle, closed models can be written down at arbitrary order if only we had the time and patience to do this. However, for epidemic dynamics on networks, these higher-order models have not been defined explicitly. Here we unambiguously define hierarchies of approximate closed models that can utilise subsystem states of any order, and show how well-known models are special cases of these hierarchies.

[1]  Akira Sasaki,et al.  Statistical Mechanics of Population: The Lattice Lotka-Volterra Model , 1992 .

[2]  K. Sharkey Deterministic epidemiological models at the individual level , 2008, Journal of mathematical biology.

[3]  Chris T Bauch,et al.  The spread of infectious diseases in spatially structured populations: an invasory pair approximation. , 2005, Mathematical biosciences.

[4]  Matthew J Simpson,et al.  Corrected mean-field models for spatially dependent advection-diffusion-reaction phenomena. , 2011, Physical review. E, Statistical, nonlinear, and soft matter physics.

[5]  Matt J. Keeling,et al.  A Motif-Based Approach to Network Epidemics , 2009, Bulletin of mathematical biology.

[6]  F. Ball,et al.  Analysis of a stochastic SIR epidemic on a random network incorporating household structure. , 2010, Mathematical biosciences.

[7]  Akira Sasaki,et al.  Pathogen invasion and host extinction in lattice structured populations , 1994, Journal of mathematical biology.

[8]  Yoh Iwasa,et al.  Lattice population dynamics for plants with dispersing seeds and Vegetative propagation , 1994, Researches on Population Ecology.

[9]  Mark Newman,et al.  Networks: An Introduction , 2010 .

[10]  Kieran J Sharkey,et al.  Message passing and moment closure for susceptible-infected-recovered epidemics on finite networks. , 2014, Physical review. E, Statistical, nonlinear, and soft matter physics.

[11]  Brian Karrer,et al.  Message passing approach for general epidemic models. , 2010, Physical review. E, Statistical, nonlinear, and soft matter physics.

[12]  Mark E. J. Newman,et al.  The Structure and Function of Complex Networks , 2003, SIAM Rev..

[13]  Kieran J Sharkey,et al.  Deterministic epidemic models on contact networks: correlations and unbiological terms. , 2011, Theoretical population biology.

[14]  Fanni Sélley,et al.  Exact deterministic representation of Markovian $${ SIR}$$SIR epidemics on networks with and without loops , 2015, Journal of mathematical biology.

[15]  M. Keeling,et al.  The effects of local spatial structure on epidemiological invasions , 1999, Proceedings of the Royal Society of London. Series B: Biological Sciences.

[16]  I. Z. Kiss,et al.  Exact Equations for SIR Epidemics on Tree Graphs , 2012, Bulletin of mathematical biology.