Isolation, purification and identification of a Shewanella oneidensis MR-1 lytic phage

[Objective] A lytic phage of Shewanella was isolated from the sewage and characterized. [Methods] Four strains of Shewanella bacteria were used as the hosts for the isolation of lytic phages from the sewage. A lytic phage against Shewanella oneidensis MR-1, which we named M1, was isolated by the double-layer agar culture method. The plaque morphology was examined. Phage 1954 微生物学通报 Microbiol. China 2016, Vol.43, No.9 Tel: 010-64807511; E-mail: tongbao@im.ac.cn; http://journals.im.ac.cn/wswxtbcn particles of M1 were concentrated by ultracentrifugation and purified by CsCl gradient centrifugation. The morphology of M1 particles was examined by transmission electron microscopy. The genome of M1 was extracted and the nucleic acid was analyzed by enzyme digestion. One-step growth curve was measured. [Results] The plaques of M1 phage were round and transparent with a diameter of about 2.3 mm−2.5 mm. Transmission electron micrographs showed that M1 had an icosahedral head about 55 nm in diameter and a long contractile tail about 170 nm in length. Phage M1 belongs to the Myoviridae family. Its genome is made of linear double-stranded DNA. The infection cycle of M1 was about 15−20 min as indicated by the one-step growth curve. [Conclusion] Bacteriophage M1 belongs to the Myoviridae family. Our results provided materials for the investigation on the roles of bacteriophages in diagenetic process on the earth.

[1]  Ji-ti Zhou,et al.  Removal of water-insoluble Sudan dyes by Shewanella oneidensis MR-1. , 2012, Bioresource technology.

[2]  Anna Obraztsova,et al.  Current Production and Metal Oxide Reduction by Shewanella oneidensis MR-1 Wild Type and Mutants , 2007, Applied and Environmental Microbiology.

[3]  R. Danovaro,et al.  Viruses as new agents of organomineralization in the geological record , 2014, Nature Communications.

[4]  Yangyang Dong,et al.  A Crp-Dependent Two-Component System Regulates Nitrate and Nitrite Respiration in Shewanella oneidensis , 2012, PloS one.

[5]  Xiang Xiao,et al.  A Novel Filamentous Phage from the Deep-Sea Bacterium Shewanella piezotolerans WP3 Is Induced at Low Temperature , 2007, Journal of bacteriology.

[6]  O. White,et al.  Genome sequence of the dissimilatory metal ion–reducing bacterium Shewanella oneidensis , 2002, Nature Biotechnology.

[7]  J. Fein,et al.  Uranium reduction by Shewanella oneidensis MR-1 as a function of NaHCO3 concentration: surface complexation control of reduction kinetics. , 2014, Environmental science & technology.

[8]  Juan Wang,et al.  Biotransformation and biomethylation of arsenic by Shewanella oneidensis MR-1. , 2016, Chemosphere.

[9]  J. Fredrickson,et al.  Respiration of metal (hydr)oxides by Shewanella and Geobacter: a key role for multihaem c-type cytochromes , 2007, Molecular microbiology.

[10]  B. Koskella,et al.  Bacteria–phage coevolution as a driver of ecological and evolutionary processes in microbial communities , 2014, FEMS microbiology reviews.

[11]  Byoung-In Sang,et al.  Isobutanol production from an engineered Shewanella oneidensis MR-1 , 2015, Bioprocess and Biosystems Engineering.

[12]  K. Thormann,et al.  Phage-induced lysis enhances biofilm formation in Shewanella oneidensis MR-1 , 2011, The ISME Journal.

[13]  J. Jofre,et al.  Bacteriophages and genetic mobilization in sewage and faecally polluted environments , 2011, Microbial biotechnology.

[14]  Hailiang Dong,et al.  Role of Microbes in the Smectite-to-Illite Reaction , 2004, Science.

[15]  W. Verstraete,et al.  Biosupported bimetallic Pd-Au nanocatalysts for dechlorination of environmental contaminants. , 2011, Environmental science & technology.

[16]  Xiang Xiao,et al.  Role of Filamentous Phage SW1 in Regulating the Lateral Flagella of Shewanella piezotolerans Strain WP3 at Low Temperatures , 2013, Applied and Environmental Microbiology.

[17]  D C White,et al.  Polyphasic taxonomy of the genus Shewanella and description of Shewanella oneidensis sp. nov. , 1999, International journal of systematic bacteriology.

[18]  K. Nealson,et al.  Bacterial Manganese Reduction and Growth with Manganese Oxide as the Sole Electron Acceptor , 1988, Science.