Identification of two novel T cell epitopes on the E2 protein of classical swine fever virus C-strain.

[1]  G. Bifulco,et al.  Insights into the Ligand Binding to Bromodomain-Containing Protein 9 (BRD9): A Guide to the Selection of Potential Binders by Computational Methods , 2021, Molecules.

[2]  H. Qiu,et al.  The Unique Glycosylation at Position 986 on the E2 Glycoprotein of Classical Swine Fever Virus Is Responsible for Viral Attenuation and Protection against Lethal Challenge , 2021, Journal of Virology.

[3]  M. D. Polêto,et al.  Making it Rain: Cloud-Based Molecular Simulations for Everyone , 2021, J. Chem. Inf. Model..

[4]  Donald B. Smith,et al.  Proposed Update to the Taxonomy of Pestiviruses: Eight Additional Species within the Genus Pestivirus, Family Flaviviridae , 2021, Viruses.

[5]  Md. Ashraful Hasan,et al.  Luteolin and abyssinone II as potential inhibitors of SARS-CoV-2: an in silico molecular modeling approach in battling the COVID-19 outbreak , 2021, Bulletin of the National Research Centre.

[6]  D. Tscharke,et al.  Overlapping Peptides Elicit Distinct CD8+ T Cell Responses following Influenza A Virus Infection , 2020, The Journal of Immunology.

[7]  Md. Shahedur Rahman,et al.  Designing a multi-epitope vaccine against SARS-CoV-2: an immunoinformatics approach , 2020, Journal of biomolecular structure & dynamics.

[8]  R. Ahuja,et al.  Structure-based drug designing and immunoinformatics approach for SARS-CoV-2 , 2020, Science Advances.

[9]  H. Qiu,et al.  P108 and T109 on E2 Glycoprotein Domain I Are Critical for the Adaptation of Classical Swine Fever Virus to Rabbits but Not for Virulence in Pigs , 2020, Journal of Virology.

[10]  K. Makita,et al.  Dynamics of Classical Swine Fever Spread in Wild Boar in 2018–2019, Japan , 2020, Pathogens.

[11]  J. Sánchez-Vizcaíno,et al.  Role of Wild Boar in the Spread of Classical Swine Fever in Japan , 2019, Pathogens.

[12]  He Huang,et al.  ff19SB: Amino-acid specific protein backbone parameters trained against quantum mechanics energy surfaces in solution. , 2019, Journal of chemical theory and computation.

[13]  P. Reche,et al.  Comprehensive Evaluation of the Expressed CD8+ T Cell Epitope Space Using High-Throughput Epitope Mapping , 2019, Front. Immunol..

[14]  W. Fang,et al.  E2 and Erns of classical swine fever virus C-strain play central roles in its adaptation to rabbits , 2019, Virus Genes.

[15]  A. Mishra,et al.  Designing B‐ and T‐cell multi‐epitope based subunit vaccine using immunoinformatics approach to control Zika virus infection , 2018, Journal of cellular biochemistry.

[16]  C. Li,et al.  The E2 glycoprotein is necessary but not sufficient for the adaptation of classical swine fever virus lapinized vaccine C-strain to the rabbit. , 2018, Virology.

[17]  Lifang Zhang.  Multi-epitope vaccines: a promising strategy against tumors and viral infections , 2017, Cellular & Molecular Immunology.

[18]  Bjoern Peters,et al.  The Immune Epitope Database and Analysis Resource in Epitope Discovery and Synthetic Vaccine Design , 2017, Front. Immunol..

[19]  A. Sette,et al.  Identification of Zika virus epitopes reveals immunodominant and protective roles for dengue virus cross-reactive CD8+ T cells , 2017, Nature Microbiology.

[20]  Pritish Kumar Varadwaj,et al.  Structural insights into conformational stability of both wild-type and mutant EZH2 receptor , 2016, Scientific Reports.

[21]  Oliver Kohlbacher,et al.  Immunoinformatics and epitope prediction in the age of genomic medicine , 2015, Genome Medicine.

[22]  M. Nielsen,et al.  A modern approach for epitope prediction: identification of foot-and-mouth disease virus peptides binding bovine leukocyte antigen (BoLA) class I molecules , 2015, Immunogenetics.

[23]  V. O'Donnell,et al.  Treatment with interferon-alpha delays disease in swine infected with a highly virulent CSFV strain. , 2015, Virology.

[24]  L. Carey,et al.  Effect of specific amino acid substitutions in the putative fusion peptide of structural glycoprotein E2 on Classical Swine Fever Virus replication. , 2014, Virology.

[25]  Hsin-Hung Lin,et al.  Identification of Cytotoxic T Lymphocyte Epitopes on Swine Viruses: Multi-Epitope Design for Universal T Cell Vaccine , 2013, PloS one.

[26]  D. Tian,et al.  Identification of three H-2K(d) restricted CTL epitopes of NS4A and NS4B protein from Yellow fever 17D vaccine. , 2013, Journal of virological methods.

[27]  D. Stuart,et al.  Structure of a Pestivirus Envelope Glycoprotein E2 Clarifies Its Role in Cell Entry , 2013, Cell reports.

[28]  H. Crooke,et al.  Characterisation of vaccine-induced, broadly cross-reactive IFN-γ secreting T cell responses that correlate with rapid protection against classical swine fever virus. , 2012, Vaccine.

[29]  H. Crooke,et al.  Challenge of Pigs with Classical Swine Fever Viruses after C-Strain Vaccination Reveals Remarkably Rapid Protection and Insights into Early Immunity , 2012, PloS one.

[30]  R. Neubig,et al.  Analyzing Binding Data , 2010, Current protocols in neuroscience.

[31]  M. Beer,et al.  Modified live marker vaccine candidate CP7_E2alf provides early onset of protection against lethal challenge infection with classical swine fever virus after both intramuscular and oral immunization. , 2009, Vaccine.

[32]  R. Ray,et al.  Inhibition of Intrahepatic Gamma Interferon Production by Hepatitis C Virus Nonstructural Protein 5A in Transgenic Mice , 2009, Journal of Virology.

[33]  Nebojsa Jojic,et al.  Extensive HLA class I allele promiscuity among viral CTL epitopes , 2007, European journal of immunology.

[34]  L. Schook,et al.  BoLA class I allele diversity and polymorphism in a herd of cattle , 2007, Immunogenetics.

[35]  Seng-Lai Tan,et al.  Mechanistic link between the anti‐HCV effect of interferon gamma and control of viral replication by a ras‐MAPK signaling cascade , 2006, Hepatology.

[36]  J. Tratschin,et al.  Identification of classical swine fever virus protein E2 as a target for cytotoxic T cells by using mRNA-transfected antigen-presenting cells. , 2005, The Journal of general virology.

[37]  J. V. van Oirschot,et al.  Vaccinology of classical swine fever: from lab to field , 2003 .

[38]  Matthias Schweizer,et al.  Genetic and antigenic characterization of novel pestivirus genotypes: implications for classification. , 2003, Virology.

[39]  R. Garry,et al.  Proteomics computational analyses suggest that hepatitis C virus E1 and pestivirus E2 envelope glycoproteins are truncated class II fusion proteins. , 2003, Virology.

[40]  K. Wiesmüller,et al.  Identification of T-cell epitopes in the structural and non-structural proteins of classical swine fever virus. , 2002, The Journal of general virology.

[41]  R. Bartenschlager,et al.  Interferon‐γ inhibits replication of subgenomic and genomic hepatitis C virus RNAs , 2002 .

[42]  P. V. van Rijn,et al.  Experimental non-transmissible marker vaccines for classical swine fever (CSF) by trans-complementation of E(rns) or E2 of CSFV. , 2002, Vaccine.

[43]  A. Rothman,et al.  Human cytotoxic T lymphocyte responses to live attenuated 17D yellow fever vaccine: identification of HLA-B35-restricted CTL epitopes on nonstructural proteins NS1, NS2b, NS3, and the structural protein E. , 2002, Virology.

[44]  S. Suradhat,et al.  The correlation of virus-specific interferon-gamma production and protection against classical swine fever virus infection. , 2001, Veterinary immunology and immunopathology.

[45]  R. Moormann,et al.  Duration of the protection of an E2 subunit marker vaccine against classical swine fever after a single vaccination. , 2001, Veterinary microbiology.

[46]  S. Edwards,et al.  Classical swine fever: the global situation. , 2000, Veterinary microbiology.

[47]  H. S. Horst,et al.  Economic aspects of the control of classical swine fever outbreaks in the European Union. , 2000, Veterinary microbiology.

[48]  A. Saalmüller,et al.  Localization of pestiviral envelope proteins E(rns) and E2 at the cell surface and on isolated particles. , 1999, The Journal of general virology.

[49]  S. Srikumaran,et al.  The Use of Bovine MHC Class I Allele-Specific Peptide Motifs and Proteolytic Cleavage Specificities for the Prediction of Potential Cytotoxic T Lymphocyte Epitopes of Bovine Viral Diarrhea Virus , 1997, Virus Genes.

[50]  A. Saalmüller,et al.  Classical swine fever virus-specific cytotoxic T lymphocytes and identification of a T cell epitope. , 1995, The Journal of general virology.

[51]  M. König,et al.  Classical swine fever virus: independent induction of protective immunity by two structural glycoproteins , 1995, Journal of virology.

[52]  M. Hulst,et al.  Glycoprotein E1 of hog cholera virus expressed in insect cells protects swine from hog cholera , 1993, Journal of virology.

[53]  H. Thiel,et al.  Hog cholera virus: molecular composition of virions from a pestivirus , 1991 .

[54]  A. Berns,et al.  Live attenuated pseudorabies virus expressing envelope glycoprotein E1 of hog cholera virus protects swine against both pseudorabies and hog cholera , 1991, Journal of virology.

[55]  H. Thiel,et al.  Pestivirus glycoprotein which induces neutralizing antibodies forms part of a disulfide-linked heterodimer , 1990, Journal of virology.

[56]  S. Barteling,et al.  Development and properties of a cell culture produced vaccine for hog cholera based on the Chinese strain. , 1990, DTW. Deutsche tierarztliche Wochenschrift.

[57]  Zixue Shi,et al.  Evaluation of a multiplex real-time RT-PCR for quantitative and differential detection of wild-type viruses and C-strain vaccine of Classical swine fever virus. , 2008, Veterinary microbiology.

[58]  H. Qiu,et al.  The Lapinized Chinese Strain Vaccine Against Classical Swine Fever Virus: A Retrospective Review Spanning Half A Century , 2006 .

[59]  J. Dahle,et al.  Assessment of safety and protective value of a cell culture modified strain "C" vaccine of hog cholera/classical swine fever virus. , 1995, Berliner und Munchener tierarztliche Wochenschrift.