Phylogeny, character evolution, and classification of Selaginellaceae (lycophytes)

[1]  Michael A. Sundue,et al.  A global phylogeny of grammitid ferns (Polypodiaceae) and its systematic implications , 2023, TAXON.

[2]  Michael A. Sundue,et al.  Circumscription of the grammitid fern genus Oreogrammitis (Polypodiaceae) with the description of three new genera: Calligrammitis, Devolia, and Glabrigrammitis , 2023, Phytotaxa.

[3]  Li‐Bing Zhang,et al.  (2943) Proposal to conserve Selaginella , nom. cons., ( Selaginellaceae ) with a conserved type , 2023, TAXON.

[4]  Jie Yang,et al.  Uncovering the hidden diversity of the rosette‐forming Selaginella tamariscina group based on morphological and molecular data , 2022, TAXON.

[5]  D. Smith,et al.  Evolution of extremely diverged plastomes in Selaginellaceae (Lycophyte) is driven by repeat patterns and the underlying DNA maintenance machinery. , 2022, The Plant journal : for cell and molecular biology.

[6]  Xianchun Zhang,et al.  Plastid phylogenomic analyses of the Selaginella sanguinolenta group (Selaginellaceae) reveal conflict signatures resulting from sequence types, outlier genes, and pervasive RNA editing. , 2022, Molecular phylogenetics and evolution.

[7]  Li‐Bing Zhang,et al.  Phylogeny, character evolution, and systematics of the fern family Ophioglossaceae based on Sanger sequence data, plastomes, and morphology. , 2022, Molecular phylogenetics and evolution.

[8]  Li‐Bing Zhang,et al.  Plastome structure, evolution, and phylogeny of Selaginella. , 2022, Molecular phylogenetics and evolution.

[9]  J. G. Burleigh,et al.  A Global Phylogenomic Study of the Thelypteridaceae , 2021, Systematic Botany.

[10]  C. Rothfels,et al.  A global phylogeny of Lycopodiaceae (Lycopodiales; lycophytes) with the description of a new genus, Brownseya , from Oceania , 2021, TAXON.

[11]  A. Ebihara,et al.  Integrative taxonomy of the Selaginella helvetica group based on morphological, molecular and ecological data , 2021, TAXON.

[12]  De‐Zhu Li,et al.  Simultaneous diversification of Polypodiales and angiosperms in the Mesozoic , 2021, Cladistics : the international journal of the Willi Hennig Society.

[13]  V. Dittrich,et al.  Telmatoblechnum (Blechnaceae): a new genus for the Uruguayan flora , 2020 .

[14]  Xianchun Zhang,et al.  Distinctive evolutionary pattern of organelle genomes linked to the nuclear genome in Selaginellaceae. , 2020, The Plant journal : for cell and molecular biology.

[15]  Iván A. Valdespino.  Taxonomic innovations in South American Selaginella (Selaginellaceae, Lycopodiophyta): description of five new species and an additional range extension , 2020, PhytoKeys.

[16]  Hang Sun,et al.  Phylogeny and classification of the tribe Lepisoreae (Polypodiaceae; pteridophyta) with the description of a new genus, Ellipinema gen. nov., segregated from Lepisorus. , 2020, Molecular phylogenetics and evolution.

[17]  Ran Wei,et al.  Plastome-based phylogenomics resolves the placement of the sanguinolenta group in the spikemoss of lycophyte (Selaginellaceae). , 2020, Molecular phylogenetics and evolution.

[18]  L. A. Góes-Neto,et al.  Stem anatomy and its relevance for the taxonomic survey of Selaginella subg. Gymnogynum (Selaginellaceae) , 2020, Plant Systematics and Evolution.

[19]  Iván A. Valdespino,et al.  Selaginella moraniana (Selaginellaceae – Lycopodiophyta): A new articulate species with puberulent lateral leaves from northwestern South America , 2019, Brittonia.

[20]  Li‐Bing Zhang,et al.  A global plastid phylogeny of the cliff fern family Woodsiaceae and a two‐genus classification of Woodsiaceae with the description of ×Woodsimatiumnothogen. nov. , 2019 .

[21]  HONG-RUI Zhang,et al.  Directed Repeats Co-occur with Few Short-Dispersed Repeats in Plastid Genome of a Spikemoss, Selaginella vardei (Selaginellaceae, Lycopodiopsida) , 2019, BMC Genomics.

[22]  HONG-RUI Zhang,et al.  The Unique Evolutionary Trajectory and Dynamic Conformations of DR and IR/DR-Coexisting Plastomes of the Early Vascular Plant Selaginellaceae (Lycophyte) , 2018, bioRxiv.

[23]  Jeffrey P. Mower,et al.  Lycophyte plastid genomics: extreme variation in GC, gene and intron content and multiple inversions between a direct and inverted orientation of the rRNA repeat , 2019, The New phytologist.

[24]  Jiaxi Liu,et al.  Studies on the complementary relationship of surface ornamentations between megaspores and microspores of Selaginella P. Beauv. (Selaginellaceae) , 2018, Microscopy research and technique.

[25]  Iván A. Valdespino,et al.  Selaginella germinans (Selaginellaceae), a new articulate species from Chapada dos Veadeiros region in the State of Goiás, Brazil , 2018, Botany Letters.

[26]  Y. Li,et al.  Genome Analysis of the Ancient Tracheophyte Selaginella tamariscina Reveals Evolutionary Features Relevant to the Acquisition of Desiccation Tolerance. , 2018, Molecular plant.

[27]  C. Rothfels,et al.  Are there too many fern genera? , 2018, Taxon.

[28]  Iván A. Valdespino,et al.  From the Guiana Highlands to the Brazilian Atlantic Rain Forest: four new species of Selaginella (Selaginellaceae – Lycopodiophyta: S. agioneuma, S. magnafornensis, S. ventricosa, and S. zartmanii) , 2018, PeerJ.

[29]  T. Michael,et al.  Extreme haplotype variation in the desiccation-tolerant clubmoss Selaginella lepidophylla , 2018, Nature Communications.

[30]  Iván A. Valdespino.  Novel fern- and centipede-like Selaginella (Selaginellaceae) species and a new combination from South America , 2017, PhytoKeys.

[31]  Kristina V. Klaus,et al.  Historical biogeography of the ancient lycophyte genus Selaginella: early adaptation to xeric habitats on Pangea , 2017, Cladistics : the international journal of the Willi Hennig Society.

[32]  A. Salino,et al.  Selaginella (Selaginellaceae) from Brazil: a new species, new records and lectotype designation , 2017, Kew Bulletin.

[33]  Iván A. Valdespino.  Selaginella hyalogramma (Selaginellaceae – Lycopodiophyta): A New Species from Venezuela, South America , 2017, American Fern Journal.

[34]  Petra Korall,et al.  A subgeneric classification of Selaginella (Selaginellaceae). , 2016, American journal of botany.

[35]  Iván A. Valdespino,et al.  Typification of selected Neotropical Selaginella (Lycopodiophyta: Selaginellaceae) taxon names and some nomenclatural innovations , 2016 .

[36]  Petra Korall,et al.  Phylogeny of Selaginellaceae: There is value in morphology after all! , 2016, American journal of botany.

[37]  D. R. Farrar,et al.  A community‐derived classification for extant lycophytes and ferns , 2016 .

[38]  A. Salino,et al.  A classification for Blechnaceae (Polypodiales: Polypodiopsida): New genera, resurrected names, and combinations , 2016 .

[39]  Hai He,et al.  A large‐scale phylogeny of the lycophyte genus Selaginella (Selaginellaceae: Lycopodiopsida) based on plastid and nuclear loci , 2016, Cladistics : the international journal of the Willi Hennig Society.

[40]  J. Prado,et al.  Megaspore Investigations of Selaginella Species from São Paulo, Brazil , 2016, American Fern Journal.

[41]  Iván A. Valdespino.  Selaginella aculeatifolia sp. nov. (Selaginellaceae–Lycopodiophyta) from the foothills of Cerro Neblina, Venezuela , 2016 .

[42]  Iván A. Valdespino.  Novelties in Selaginella (Selaginellaceae – Lycopodiophyta), with emphasis on Brazilian species , 2015, PhytoKeys.

[43]  Li‐Bing Zhang,et al.  Spore morphology of Selaginella (Selaginellaceae) from China and its systematic significance , 2015 .

[44]  Li‐Bing Zhang,et al.  A classification of Selaginella (Selaginellaceae) based on molecular (chloroplast and nuclear), macromorphological, and spore features , 2015 .

[45]  Li‐Bing Zhang,et al.  Selaginella chuweimingii (Selaginellaceae) sp. nov. from Yunnan, China , 2015 .

[46]  Gustavo Heringer,et al.  Seven new species of Selaginella subg. Stachygynandrum (Selaginellaceae) from Brazil and new synonyms for the genus , 2015, PhytoKeys.

[47]  Michael S. Barker,et al.  A total evidence approach to understanding phylogenetic relationships and ecological diversity in Selaginella subg. Tetragonostachys. , 2013, American journal of botany.

[48]  K. Katoh,et al.  MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability , 2013, Molecular biology and evolution.

[49]  Ramón Doallo,et al.  CircadiOmics: integrating circadian genomics, transcriptomics, proteomics and metabolomics , 2012, Nature Methods.

[50]  Benjamin Øllgaard.  Mudanças nomenclaturais em Lycopodiaceae do Brasil , 2012 .

[51]  Michael S. Barker,et al.  The Selaginella Genome Identifies Genetic Changes Associated with the Evolution of Vascular Plants , 2011, Science.

[52]  Kai F. Müller,et al.  The evolution of the plastid chromosome in land plants: gene content, gene order, gene function , 2011, Plant Molecular Biology.

[53]  Mark A. Miller,et al.  Creating the CIPRES Science Gateway for inference of large phylogenetic trees , 2010, 2010 Gateway Computing Environments Workshop (GCE).

[54]  D. Smith.  Unparalleled GC content in the plastid DNA of Selaginella , 2009, Plant Molecular Biology.

[55]  K. Pryer,et al.  Evidence for a Cenozoic radiation of ferns in an angiosperm-dominated canopy , 2009, Proceedings of the National Academy of Sciences.

[56]  J. Banks.  Selaginella and 400 million years of separation. , 2009, Annual review of plant biology.

[57]  J. Rougemont,et al.  A rapid bootstrap algorithm for the RAxML Web servers. , 2008, Systematic biology.

[58]  P. Zamora.  Strobilar Organization in Philippine Species of Selaginella , 2007 .

[59]  A. Konagaya,et al.  The chloroplast genome from a lycophyte (microphyllophyte), Selaginella uncinata, has a unique inversion, transpositions and many gene losses , 2007, Journal of Plant Research.

[60]  Petra Korall,et al.  Megaspore morphology in the Selaginellaceae in a phylogenetic context: A study of the megaspore surface and wall structure using scanning electron microscopy , 2006 .

[61]  R. Felger.  The Pteridophytes of Mexico , 2005 .

[62]  M. Guerra,et al.  Variation in chromosome numbers, CMA bands and 45S rDNA sites in species of Selaginella (Pteridophyta). , 2005, Annals of botany.

[63]  D. Pol.  Empirical problems of the hierarchical likelihood ratio test for model selection. , 2004, Systematic biology.

[64]  D. Posada,et al.  Model selection and model averaging in phylogenetics: advantages of akaike information criterion and bayesian approaches over likelihood ratio tests. , 2004, Systematic biology.

[65]  H. Schneider,et al.  Phylogeny and evolution of ferns (monilophytes) with a focus on the early leptosporangiate divergences. , 2004, American journal of botany.

[66]  Petra Korall,et al.  The phylogenetic history of Selaginellaceae based on DNA sequences from the plastid and nucleus: extreme substitution rates and rate heterogeneity. , 2004, Molecular phylogenetics and evolution.

[67]  John P. Huelsenbeck,et al.  MrBayes 3: Bayesian phylogenetic inference under mixed models , 2003, Bioinform..

[68]  Petra Korall,et al.  Phylogenetic relationships in Selaginellaceae based on RBCL sequences. , 2002, American journal of botany.

[69]  Petra Korall,et al.  Phylogeny of Selaginellaceae: Evaluation of Generic/Subgeneric Relationships Based on rbcL Gene Sequences , 1999, International Journal of Plant Sciences.

[70]  E. Kellogg,et al.  Testing for Phylogenetic Conflict Among Molecular Data Sets in the Tribe Triticeae (Gramineae) , 1996 .

[71]  J. Farris,et al.  PARSIMONY JACKKNIFING OUTPERFORMS NEIGHBOR‐JOINING , 1996, Cladistics : the international journal of the Willi Hennig Society.

[72]  Iván A. Valdespino.  Notes on Neotropical Selaginella (Selaginellaceae), including new species from Panama , 1993, Brittonia.

[73]  M. Takamiya.  Comparative karyomorphology and interrelationships ofSelaginella in Japan , 1993, Journal of Plant Research.

[74]  Iván A. Valdespino.  New species of Selaginella (Selaginellaceae) from the Guayana Highland of Venezuela , 1992, Brittonia.

[75]  N. Quansah.  Sporangial Distribution Patterns in the Strobili of African and Madagascan Selaginella , 1988 .

[76]  Á. Löve.  In IOPB chromosome number reports LXII. , 1978 .

[77]  Á. Löve.  IOPB CHROMOSOME NUMBER REPORTS LIII , 1976 .

[78]  H. Akaike.  A new look at the statistical model identification , 1974 .

[79]  Joseph Felsenstein,et al.  Maximum Likelihood and Minimum-Steps Methods for Estimating Evolutionary Trees from Data on Discrete Characters , 1973 .

[80]  J. Mickel,et al.  Actino-plectostely, a Complex New Stelar Pattern in Selaginella , 1969 .

[81]  K. Jones,et al.  Cytomorphological variation in Selaginella , 1967 .

[82]  H. A. Miller.  The "Moss" Hypopterygiopsis Is Selaginella , 1967 .

[83]  R. Tryon.  Selaginella Rupestris and Its Allies , 1955 .

[84]  Robert K. Jansen,et al.  Aberration or Analogy? The Atypical Plastomes of Geraniaceae , 2018 .

[85]  Tracey A Ruhlman,et al.  Plastid Genomes of Seed Plants , 2012 .

[86]  K. Wong.  Selaginellaceae , 2010, Flora of Peninsular Malaysia.

[87]  B. Goffinet,et al.  Utility of the Internal Transcribed Spacers of the 18S-5.8S-26S Nuclear Ribosomal DNA in Land Plant Systematics with Special Emphasis on Bryophytes , 2006 .

[88]  Mark P. Simmons,et al.  Phylogeny and Delimitation of the Celastrales Inferred from Nuclear and Plastid Genes , 2006 .

[89]  Xian-chun Zhang,et al.  Studies on the Chinense species of Selaginellaceae (II)--A preliminary observation on the strobilar organization in Selaginella , 2001 .

[90]  T. A. Hall,et al.  BIOEDIT: A USER-FRIENDLY BIOLOGICAL SEQUENCE ALIGNMENT EDITOR AND ANALYSIS PROGRAM FOR WINDOWS 95/98/ NT , 1999 .

[91]  Elizabeth A. Kellogg,et al.  An ordinal classification for the families of flowering plants , 1998 .

[92]  J. Steyermark.  A Remarkable New Selaginella From Venezuela , 1986 .

[93]  K. Sakurai.  Beobachtungen ^|^uuml;ber Japnische Moosflora. XXVII , 1943 .