An unusual triosephosphate isomerase from the early divergent eukaryote Giardia lamblia

Recombinant triosephosphate isomerase from the parasite Giardia lamblia (GlTIM) was characterized and immunolocalized. The enzyme is distributed uniformly throughout the cytoplasm. Size exclusion chromatography of the purified enzyme showed two peaks with molecular weights of 108 and 55 kDa. Under reducing conditions, only the 55‐kDa protein was detected. In denaturing gel electrophoresis without dithiothreitol, the enzyme showed two bands with molecular weights of 28 and 50 kDa; with dithiotretitol, only the 28‐kDa protein was observed. These data indicate that GlTIM may exist as a tetramer or a dimer and that, in the former, the two dimers are covalently linked by disulfide bonds. The kinetics of the dimer were similar to those of other TIMs. The tetramer exhibited half of the kcat of the dimer without changes in the Km. Studies on the thermal stability and the apparent association constants between monomers showed that the tetramer was slightly more stable than the dimer. This finding suggests the oligomerization is not related to enzyme thermostability as in Thermotoga maritima. Instead, it could be that oligomerization is related to the regulation of catalytic activity in different states of the life cycle of this mesophilic parasite. Proteins 2004. © 2004 Wiley‐Liss, Inc.

[1]  S. Waley,et al.  Refolding of triose phosphate isomerase. , 1973, The Biochemical journal.

[2]  D W Banner,et al.  On the three-dimensional structure and catalytic mechanism of triose phosphate isomerase. , 1981, Philosophical transactions of the Royal Society of London. Series B, Biological sciences.

[3]  S. Osawa,et al.  Evolutionary relationship of archaebacteria, eubacteria, and eukaryotes inferred from phylogenetic trees of duplicated genes. , 1989, Proceedings of the National Academy of Sciences of the United States of America.

[4]  Miklós Müller,et al.  Energy metabolism of ancestral eukaryotes: a hypothesis based on the biochemistry of amitochondriate parasitic protists. , 1992, Bio Systems.

[5]  D. A. Fernández‐Velasco,et al.  Sequencing, expression and properties of triosephosphate isomerase from Entamoeba histolytica. , 1997, European journal of biochemistry.

[6]  J. Knowles,et al.  Enzyme catalysis: not different, just better , 1991, Nature.

[7]  F. Opperdoes,et al.  Kinetic properties of triose-phosphate isomerase from Trypanosoma brucei brucei. A comparison with the rabbit muscle and yeast enzymes. , 1987, European journal of biochemistry.

[8]  W. Doolittle,et al.  Evidence that eukaryotic triosephosphate isomerase is of alpha-proteobacterial origin. , 1997, Proceedings of the National Academy of Sciences of the United States of America.

[9]  K. Noll,et al.  The hyperthermophilic bacterium Thermotoga neapolitana possesses two isozymes of the 3-phosphoglycerate kinase/triosephosphate isomerase fusion protein. , 1995, FEMS microbiology letters.

[10]  P. Upcroft,et al.  Drug resistance and Giardia. , 1993, Parasitology today.

[11]  J. Gogarten,et al.  The Prokaryote-to-Eukaryote Transition Reflected in the Evolution of the V/F/A-ATPase Catalytic and Proteolipid Subunits , 1998, Journal of Molecular Evolution.

[12]  M. Fechheimer,et al.  Fibrillarin, A Conserved Pre‐ribosomal RNA Processing Protein of Giardia , 1998, The Journal of eukaryotic microbiology.

[13]  R. Hensel,et al.  Tetrameric triosephosphate isomerase from hyperthermophilic Archaea , 1996, FEBS letters.

[14]  R. Pérez-Montfort,et al.  Susceptibility to proteolysis of triosephosphate isomerase from two pathogenic parasites: Characterization of an enzyme with an intact and a nicked monomer , 2002, Proteins.

[15]  A. Rojo-Domínguez,et al.  Species-specific inhibition of homologous enzymes by modification of nonconserved amino acids residues. The cysteine residues of triosephosphate isomerase. , 1996, European journal of biochemistry.

[16]  J. Knowles,et al.  Triosephosphate isomerase: energetics of the reaction catalyzed by the yeast enzyme expressed in Escherichia coli. , 1988, Biochemistry.

[17]  R. Pérez-Montfort,et al.  Catalysis and stability of triosephosphate isomerase from Trypanosoma brucei with different residues at position 14 of the dimer interface. Characterization of a catalytically competent monomeric enzyme. , 2002, Biochemistry.

[18]  P. Upcroft,et al.  Resistance to the nitroheterocyclic drugs. , 1994, Acta tropica.

[19]  R. Jaenicke,et al.  Dissection of the gene of the bifunctional PGK‐TIM fusion protein from the hyperthermophilic bacterium Thermotoga maritima: Design and characterization of the separate triosephosphate isomerase , 1997, Protein science : a publication of the Protein Society.

[20]  L. Jiménez-Garcia,et al.  Localization of intranuclear RNA by electron microscopy in situ hybridization using a genomic DNA probe. , 1998, Archives of medical research.

[21]  D. Koshland,et al.  The subunit structure and subunit interactions of cytidine triphosphate synthetase. , 1970, The Journal of biological chemistry.

[22]  G. S. Bell,et al.  Tiny TIM: a small, tetrameric, hyperthermostable triosephosphate isomerase. , 2001, Journal of molecular biology.

[23]  C. Pace,et al.  How to measure and predict the molar absorption coefficient of a protein , 1995, Protein science : a publication of the Protein Society.

[24]  R Abagyan,et al.  Design, creation, and characterization of a stable, monomeric triosephosphate isomerase. , 1994, Proceedings of the National Academy of Sciences of the United States of America.

[25]  R. W. Gracy,et al.  Dimerization and reactivation of triosephosphate isomerase in reverse micelles. , 1992, European journal of biochemistry.

[26]  T. Nash,et al.  Carboxy-terminal sequence conservation among variant-specific surface proteins of Giardia lamblia. , 1991, Molecular and biochemical parasitology.

[27]  Mark Gerstein,et al.  A resolution-sensitive procedure for comparing protein surfaces and its application to the comparison of antigen-combining sites , 1992 .

[28]  E. Saavedra-Lira,et al.  Sulfhydryl reagent susceptibility in proteins with high sequence similarity--triosephosphate isomerase from Trypanosoma brucei, Trypanosoma cruzi and Leishmania mexicana. , 1998, European journal of biochemistry.

[29]  W. Doolittle,et al.  Root of the universal tree of life based on ancient aminoacyl-tRNA synthetase gene duplications. , 1995, Proceedings of the National Academy of Sciences of the United States of America.

[30]  G. S. Bell,et al.  Preliminary crystallographic studies of triosephosphate isomerase (TIM) from the hyperthermophilic Archaeon Pyrococcus woesei. , 1998, Acta crystallographica. Section D, Biological crystallography.

[31]  M. Noble,et al.  Overexpression of trypanosomal triosephosphate isomerase in Escherichia coli and characterisation of a dimer-interface mutant. , 1993, European journal of biochemistry.

[32]  R. D. Adam,et al.  The Giardia lamblia genome. , 2000, International journal for parasitology.

[33]  W G Hol,et al.  Three hTIM mutants that provide new insights on why TIM is a dimer. , 1996, Journal of molecular biology.

[34]  M. Edwards,et al.  Glucose metabolism in Giardia intestinalis. , 1991, Molecular and biochemical parasitology.

[35]  I. Becker,et al.  Cloning, expression, purification and characterization of triosephosphate isomerase from Trypanosoma cruzi. , 1997, European journal of biochemistry.

[36]  R. W. Gracy,et al.  Probing the catalytic sites of triosephosphate isomerase by 31P-NMR with reversibly and irreversibly binding substrate analogues. , 1991, European journal of biochemistry.

[37]  T. Edlind,et al.  Unusual ribosomal RNA of the intestinal parasite Giardia lamblia. , 1987, Nucleic acids research.

[38]  D E Koshland,et al.  Aspartate receptors of Escherichia coli and Salmonella typhimurium bind ligand with negative and half-of-the-sites cooperativity. , 1994, Biochemistry.

[39]  T. Nash,et al.  Complementation of an Escherichia coli glycolysis mutant by Giardia lamblia triosephosphate isomerase. , 1994, Experimental parasitology.

[40]  D. A. Fernández‐Velasco,et al.  A COMPARATIVE STUDY OF BIOCHEMICAL AND IMMUNOLOGICAL PROPERTIES OF TRIOSEPHOSPHATE ISOMERASE FROM TAENIA SOLIUM AND SUS SCROFA , 2003, The Journal of parasitology.

[41]  J. Knowles,et al.  Evolution of enzyme function and the development of catalytic efficiency. , 1976, Biochemistry.

[42]  M. Sogin,et al.  Phylogenetic meaning of the kingdom concept: an unusual ribosomal RNA from Giardia lamblia. , 1989, Science.

[43]  L. Wyns,et al.  The crystal structure of triosephosphate isomerase (TIM) from Thermotoga maritima: A comparative thermostability structural analysis of ten different TIM structures , 1999, Proteins.

[44]  F. Opperdoes,et al.  Localization of nine glycolytic enzymes in a microbody‐like organelle in Trypanosoma brucei: The glycosome , 1977, FEBS letters.

[45]  P. Upcroft,et al.  My favorite cell: Giardia. , 1998, BioEssays : news and reviews in molecular, cellular and developmental biology.

[46]  M. V. Van Regenmortel,et al.  Isolation of viral IgY antibodies from yolks of immunized hens. , 1980, Immunological communications.

[47]  A. Sun,et al.  Interactions between the catalytic centers and subunit interface of triosephosphate isomerase probed by refolding, active site modification, and subunit exchange. , 1992, The Journal of biological chemistry.

[48]  H. Schägger,et al.  Tricine-sodium dodecyl sulfate-polyacrylamide gel electrophoresis for the separation of proteins in the range from 1 to 100 kDa. , 1987, Analytical biochemistry.

[49]  R. Jaenicke,et al.  Folding and Association of Triose Phosphate Isomerase from Rabbit Muscle , 1980, Zeitschrift fur Naturforschung. Section C, Biosciences.

[50]  H. Balaram,et al.  Triosephosphate isomerase from Plasmodium falciparum: the crystal structure provides insights into antimalarial drug design. , 1997, Structure.