Development of MD Engine: High-speed accelerator with parallel processor design for molecular dynamics simulations

SHINJIRO TOYODA, HIROH MIYAGAWA, KUNIHIRO KITAMURA, TAKASHI AMISAKI, EIRI HASHIMOTO, HITOSHI IKEDA, AKIHIRO KUSUMI, NOBUAKI MIYAKAWA Component Development Department, Suzuka Fuji Xerox Co., Ltd., 2274 Hongo, Ebina, Kanagawa 243-04, Japan Research Center, Taisho Pharmaceutical Co., Ltd., 1-403 Yoshino, Ohmiya, Saitama 330, Japan Department of Mathematics and Computer Science, Shimane University, 1060 Nishikawatsu, Matsue 690, Japan Document Engineering Laboratory, Fuji Xerox Co., Ltd., 430 Sakai, Nakai, Ashigarakami, Kanagawa 259-01, Japan Department of Biological Science, Nagoya University, Chikusa, Nagoya 464-01, Japan Electronic Components Technology Department, Fuji Xerox Co., Ltd., 2274 Hongo, Ebina, Kanagawa 243-04, Japan