Breast-region segmentation in MRI using chest region atlas and SVM

An important step for computerized analysis of breast magnetic resonance imaging (MRI) is segmentation of the breast region. Due to the similar signal intensity of fibroglandular tissue and the chest wall, the segmentation process is difficult for breasts with fibroglandular tissue connected to the chest wall. In order to overcome this challenge, a new framework is presented that relies on a chest region atlas. The proposed method first detects the approximated breast–chest wall boundary using an intensity-based operation. A support vector machine (SVM) then determines the connectivity of fibroglandular tissue to the chest wall by the extracted features from the obtained breast–chest wall boundary. Finally, the obtained breast–chest wall boundary is accurately refined using the geometric shape of the chest region, which is obtained by an atlas-based segmentation method. The proposed method is validated using a dataset of 5964 breast MRI images from 126 women. The Dice similarity coefficient (DSC), total overlap (TO), false negative (FN), and false positive (FP) values are calculated to measure the similarity between automatic and manual segmentation results. Our method achieves DSC, TO, FN, and FP values of 96.46%, 96.41%, 3.59%, and 3.51%, respectively. The results prove the effectiveness of the presented algorithm for breasts with different sizes, shapes, and density patterns.

[1]  Shandong Wu,et al.  Automated chest wall line detection for whole-breast segmentation in sagittal breast MR images. , 2013, Medical physics.

[2]  Lei Wang,et al.  Fully automatic breast segmentation in 3D breast MRI , 2012, 2012 9th IEEE International Symposium on Biomedical Imaging (ISBI).

[3]  J. Gore,et al.  Multiplicative intrinsic component optimization (MICO) for MRI bias field estimation and tissue segmentation. , 2014, Magnetic resonance imaging.

[4]  Qiang Li,et al.  Fully automated segmentation of whole breast using dynamic programming in dynamic contrast enhanced MR images , 2017, Medical physics.

[5]  Matti Pietikäinen,et al.  Adaptive document image binarization , 2000, Pattern Recognit..

[6]  Pierre Soille,et al.  Morphological Image Analysis: Principles and Applications , 2003 .

[7]  Anne L. Martel,et al.  Automatic atlas-based segmentation of the breast in MRI for 3D breast volume computation. , 2012, Medical physics.

[8]  Shahriar B. Shokouhi,et al.  Localized-atlas-based segmentation of breast MRI in a decision-making framework , 2017, Australasian Physical & Engineering Sciences in Medicine.

[9]  Mark Steyvers,et al.  Multidimensional Scaling , 2018, IBM SPSS Statistics 25 Step by Step.

[10]  Onur Osman,et al.  Breast MR segmentation and lesion detection with cellular neural networks and 3D template matching , 2008, Comput. Biol. Medicine.

[11]  Andriy Myronenko,et al.  Intensity-Based Image Registration by Minimizing Residual Complexity , 2010, IEEE Transactions on Medical Imaging.

[12]  Thomas H. Helbich,et al.  Breast MRI—Diagnosis and Intervention, E.A. Morris, L. Lieberman. Springer-Verlag (2005), pages 518, Price: Euro 124.95, ISBN 0-387-21997-8 , 2006 .

[13]  Berkman Sahiner,et al.  Correlation between mammographic density and volumetric fibroglandular tissue estimated on breast MR images. , 2004, Medical physics.

[14]  Shigeo Abe Support Vector Machines for Pattern Classification , 2010, Advances in Pattern Recognition.

[15]  Torsten Rohlfing,et al.  Quo Vadis, Atlas-Based Segmentation? , 2005 .

[16]  M. Yaffe,et al.  American Cancer Society Guidelines for Breast Screening with MRI as an Adjunct to Mammography , 2007 .

[17]  Tim W. Nattkemper,et al.  An Adaptive Tissue Characterisation Network for Model-Free Visualisation of Dynamic Contrast-Enhanced Magnetic Resonance Image Data , 2005 .

[18]  Shahriar B. Shokouhi,et al.  Computer-aided detection of breast lesions in DCE-MRI using region growing based on fuzzy C-means clustering and vesselness filter , 2017, EURASIP J. Adv. Signal Process..

[19]  A. Bert,et al.  A fully automatic algorithm for segmentation of the breasts in DCE-MR images , 2010, 2010 Annual International Conference of the IEEE Engineering in Medicine and Biology.

[20]  Min-Ying Su,et al.  Development of a quantitative method for analysis of breast density based on three-dimensional breast MRI. , 2008, Medical physics.

[21]  Jianhua Yao,et al.  Breast Tumor Analysis in Dynamic Contrast Enhanced MRI Using Texture Features and Wavelet Transform , 2009, IEEE Journal of Selected Topics in Signal Processing.

[22]  Min-Ying Su,et al.  Template-based automatic breast segmentation on MRI by excluding the chest region. , 2013, Medical physics.

[23]  Olga Chambers,et al.  Automated breast-region segmentation in the axial breast MR images , 2015, Comput. Biol. Medicine.

[24]  Min-Ying Su,et al.  Comparison of breast density measured on MR images acquired using fat-suppressed versus nonfat-suppressed sequences. , 2011, Medical physics.

[25]  Brijesh Verma,et al.  Classification of benign and malignant patterns in digital mammograms for the diagnosis of breast cancer , 2010, Expert Syst. Appl..

[26]  Michael Brady,et al.  Analysis of dynamic MR breast images using a model of contrast enhancement , 1997, Medical Image Anal..

[27]  Nico Karssemeijer,et al.  Breast Segmentation and Density Estimation in Breast MRI: A Fully Automatic Framework , 2015, IEEE Journal of Biomedical and Health Informatics.

[28]  Farzad Khalvati,et al.  Automated Segmentation of Breast in 3-D MR Images Using a Robust Atlas , 2015, IEEE Transactions on Medical Imaging.

[29]  Hamid Soltanian-Zadeh,et al.  Fast opposite weight learning rules with application in breast cancer diagnosis , 2013, Comput. Biol. Medicine.

[30]  Guido Gerig,et al.  User-guided 3D active contour segmentation of anatomical structures: Significantly improved efficiency and reliability , 2006, NeuroImage.

[31]  S. S. Upda,et al.  Recognition of Arabic Characters , 1992, IEEE Trans. Pattern Anal. Mach. Intell..

[32]  M. Giger,et al.  Computerized interpretation of breast MRI: investigation of enhancement-variance dynamics. , 2004, Medical physics.

[33]  Simon J. Doran,et al.  A computerized volumetric segmentation method applicable to multi-centre MRI data to support computer-aided breast tissue analysis, density assessment and lesion localization , 2016, Medical & Biological Engineering & Computing.

[34]  Tomoe Barr,et al.  Automated breast segmentation of fat and water MR images using dynamic programming. , 2015, Academic radiology.

[35]  Linda G. Shapiro,et al.  Computer and Robot Vision , 1991 .

[36]  Heinz-Otto Peitgen,et al.  Computer assistance for MR based diagnosis of breast cancer: Present and future challenges , 2007, Comput. Medical Imaging Graph..