Estimating the thermodynamics and kinetics of chlorinated hydrocarbon degradation

Many different degradation reactions of chlorinated hydrocarbons are possible in natural groundwaters. In order to identify which degradation reactions are important, a large number of possible reaction pathways must be sorted out. Recent advances in ab initio electronic structure methods have the potential to help identify relevant environmental degradation reactions by characterizing the thermodynamic properties of all relevant contaminant species and intermediates for which experimental data are usually not available, as well as provide activation energies for relevant pathways. In this paper, strategies based on ab initio electronic structure methods for estimating thermochemical and kinetic properties of reactions with chlorinated hydrocarbons are presented. Particular emphasis is placed on strategies that are computationally fast and can be used for large organochlorine compounds such as 4,4′-DDT

[1]  R. Bartlett Coupled-cluster approach to molecular structure and spectra: a step toward predictive quantum chemistry , 1989 .

[2]  David A. Dixon,et al.  The Nature and Absolute Hydration Free Energy of the Solvated Electron in Water , 2003 .

[3]  Rodney J. Bartlett,et al.  Fifth-Order Many-Body Perturbation Theory and Its Relationship to Various Coupled-Cluster Approaches* , 1986 .

[4]  M. Huron,et al.  Calculation of the interaction energy of one molecule with its whole surrounding. II. Method of calculating electrostatic energy , 1974 .

[5]  S. H. Vosko,et al.  Accurate spin-dependent electron liquid correlation energies for local spin density calculations: a critical analysis , 1980 .

[6]  Arieh Ben-Naim,et al.  Solvation thermodynamics of nonionic solutes , 1984 .

[7]  Paul Winget,et al.  Reductive dechlorination of 1,1,2,2-tetrachloroethane. , 2002, Environmental science & technology.

[8]  W. Kohn,et al.  Self-Consistent Equations Including Exchange and Correlation Effects , 1965 .

[9]  Timothy Clark,et al.  Efficient diffuse function‐augmented basis sets for anion calculations. III. The 3‐21+G basis set for first‐row elements, Li–F , 1983 .

[10]  R. Little,et al.  PROBLEMS AND PROSPECTS OF THE CONCERTED DISSOCIATIVE ELECTRON TRANSFER MECHANISM , 1999 .

[11]  Rick A. Kendall,et al.  Benchmark calculations with correlated molecular wave functions. II. Configuration interaction calculations on first row diatomic hydrides , 1993 .

[12]  A. D. King,et al.  Solubility of methanol in compressed nitrogen, argon, methane, ethylene, ethane, carbon dioxide, and nitrous oxide. Evidence for association of carbon dioxide with methanol in the gas phase , 1972 .

[13]  V. Barone,et al.  Toward reliable density functional methods without adjustable parameters: The PBE0 model , 1999 .

[14]  Donald G. Truhlar,et al.  Continuum Solvation Models: Classical and Quantum Mechanical Implementations , 2007 .

[15]  D. Dixon,et al.  Heats of formation of CCl and CCl2 from ab initio quantum chemistry , 2001 .

[16]  J. Bozzelli,et al.  Structures, Intramolecular Rotation Barriers, and Thermochemical Properties of Radicals Derived from H Atom Loss in Mono-, Di-, and Trichloromethanol and Parent Chloromethanols , 2001 .

[17]  P. K. Pearson,et al.  Theoretical Potential Energy Curves for OH, HF+, HF, HF−, NeH+, and NeH , 1972 .

[18]  R. Pierotti,et al.  Aqueous Solutions of Nonpolar Gases1 , 1965 .

[19]  J. Tomasi,et al.  Electrostatic interaction of a solute with a continuum. A direct utilizaion of AB initio molecular potentials for the prevision of solvent effects , 1981 .

[20]  Rick A. Kendall,et al.  BENCHMARK CALCULATIONS WITH CORRELATED MOLECULAR WAVE FUNCTIONS. III: CONFIGURATION INTERACTION CALCULATIONS ON FIRST ROW HOMONUCLEAR DIATOMICS , 1993 .

[21]  C. Cramer,et al.  An SCF Solvation Model for the Hydrophobic Effect and Absolute Free Energies of Aqueous Solvation , 1992, Science.

[22]  A. L. Roberts,et al.  Reaction of 1,1,1-Trichloroethane with Zero-Valent Metals and Bimetallic Reductants , 1998 .

[23]  J. Tomasi,et al.  Ab initio study of solvated molecules: A new implementation of the polarizable continuum model , 1996 .

[24]  N. Wolfe,et al.  Methoxychlor and DDT degradation in water: rates and products , 1977 .

[25]  J. Savéant,et al.  Successive Removal of Chloride Ions from Organic Polychloride Pollutants. Mechanisms of Reductive Electrochemical Elimination in Aliphatic Gem-Polychlorides, α,β-Polychloroalkenes, and α,β-Polychloroalkanes in Mildly Protic Medium , 2003 .

[26]  T. Dunning,et al.  Predicting the Proton Affinities of H2O and NH3 , 1998 .

[27]  A. Klamt,et al.  COSMO : a new approach to dielectric screening in solvents with explicit expressions for the screening energy and its gradient , 1993 .

[28]  P. Piecuch Potential energy curves for the HF− and CH3F− anions: a coupled cluster study , 1997 .

[29]  C. Cramer,et al.  Continuum Solvation Models , 2002 .

[30]  P. Winget,et al.  Computational electrochemistry: aqueous one-electron oxidation potentials for substituted anilines , 2000 .

[31]  Jacopo Tomasi,et al.  Molecular Interactions in Solution: An Overview of Methods Based on Continuous Distributions of the Solvent , 1994 .

[32]  J. Bertrán,et al.  A Monte-Carlo Simulation of the Electrochemical Reduction of Alkyl-Halides in Water - On the Validity of Marcus Relationship , 1994 .

[33]  Paul V. Roberts,et al.  A critical review of Henry's law constants for environmental applications , 1996 .

[34]  T. Dunning,et al.  Electron affinities of the first‐row atoms revisited. Systematic basis sets and wave functions , 1992 .

[35]  J. Savéant,et al.  Reductive Cleavage of Carbon Tetrachloride in a Polar Solvent. An Example of a Dissociative Electron Transfer with Significant Attractive Interaction between the Caged Product Fragments , 2000 .

[36]  K. Balasubramanian,et al.  Structure and energetics of CF3Cl−, CF3Br−, and CF3I− radical anions , 1997 .

[37]  K. P. Lim,et al.  Experiments and Theory on the Thermal Decomposition of CHCl3 and the Reactions of CCl2 , 1997 .

[38]  P L McCarty,et al.  ES Critical Reviews: Transformations of halogenated aliphatic compounds. , 1987, Environmental science & technology.

[39]  A. Klamt,et al.  Fast solvent screening via quantum chemistry: COSMO‐RS approach , 2002 .

[40]  F. J. Luque,et al.  Theoretical Methods for the Representation of Solvent , 1996 .

[41]  G. R. Sunaryo,et al.  TEMPERATURE DEPENDENCE OF EQUILIBRIUM AND RATE CONSTANTS OF REACTIONS INDUCING CONVERSION BETWEEN HYDRATED ELECTRON AND ATOMIC HYDROGEN , 1994 .

[42]  L. Curtiss,et al.  Gaussian-3 (G3) theory for molecules containing first and second-row atoms , 1998 .

[43]  J. Bertrán,et al.  Dissociative electron transfer. Ab initio study of the carbon-halogen bond reductive cleavage in methyl and perfluoromethyl halides. Role of the solvent , 1992 .

[44]  J. V. Coe Fundamental properties of bulk water from cluster ion data , 2001 .

[45]  Burke,et al.  Generalized Gradient Approximation Made Simple. , 1996, Physical review letters.

[46]  R. Schwarzenbach,et al.  Environmental Organic Chemistry , 1993 .

[47]  Carl L. Yaws,et al.  Thermodynamic and Physical Property Data , 1992 .

[48]  D. Dixon,et al.  The Molecular Structures and Energetics of Cl2CO, ClCO, Br2CO, and BrCO , 2000 .

[49]  Kenneth S. Pitzer,et al.  Energy Levels and Thermodynamic Functions for Molecules with Internal Rotation I. Rigid Frame with Attached Tops , 1942 .

[50]  A. Soriano,et al.  A quantum mechanics-molecular mechanics study of dissociative electron transfer: The methylchloride radical anion in aqueous solution , 2002 .

[51]  P. Winget,et al.  Computation of equilibrium oxidation and reduction potentials for reversible and dissociative electron-transfer reactions in solution , 2004 .

[52]  J. Savéant A simple model for the kinetics of dissociative electron transfer in polar solvents. Application to the homogeneous and heterogeneous reduction of alkyl halides , 1987 .

[53]  F. Harris,et al.  Electron Detachment in H− + F and H + F− Collisions , 1968 .

[54]  Chiung-Ju Chen,et al.  STANDARD CHEMICAL THERMODYNAMIC PROPERTIES OF MULTICHLORO ALKANES AND ALKENES : A MODIFIED GROUP ADDITIVITY SCHEME , 1998 .

[55]  David W. Kennedy,et al.  Dechlorination of Carbon Tetrachloride by Fe(II) Associated with Goethite , 2000 .

[56]  D. Dixon,et al.  Heats of formation and ionization energies of NHx, x=0–3 , 2001 .

[57]  A. Becke Density-functional thermochemistry. III. The role of exact exchange , 1993 .

[58]  Paul G Tratnyek,et al.  Photoeffects on the Reduction of Carbon Tetrachloride by Zero-Valent Iron , 1998 .

[59]  K. Sharp,et al.  Macroscopic models of aqueous solutions : biological and chemical applications , 1993 .

[60]  John A. Cherry,et al.  Groundwater contamination: pump-and-treat remediation , 1989 .

[61]  T. Tada,et al.  Ab initio MO studies on the potential energy surface of the methyl chloride radical anion , 1992 .

[62]  Paul G Tratnyek,et al.  Reductive dehalogenation of chlorinated methanes by iron metal. , 1994, Environmental science & technology.

[63]  Krishnan Raghavachari,et al.  Gaussian-2 theory for molecular energies of first- and second-row compounds , 1991 .

[64]  C. Cramer,et al.  Implicit Solvation Models: Equilibria, Structure, Spectra, and Dynamics. , 1999, Chemical reviews.

[65]  T. H. Dunning Gaussian basis sets for use in correlated molecular calculations. I. The atoms boron through neon and hydrogen , 1989 .

[66]  Bruce C. Garrett,et al.  A Systematic Study of the Reactions of OH- with Chlorinated Methanes. 1. Benchmark Studies of the Gas-Phase Reactions , 2001 .

[67]  Angela K. Wilson,et al.  Gaussian basis sets for use in correlated molecular calculations. IX. The atoms gallium through krypton , 1993 .

[68]  J. Simons,et al.  Theoretical predictions of stable negative ions: HF−, LiH−, NaH− , 1975 .

[69]  S. Benson,et al.  Thermochemical Kinetics: Methods for the Estimation of Thermochemical Data and Rate Parameters , 1976 .

[70]  M. Reinhard,et al.  Transformation of carbon tetrachloride in the presence of sulfide, biotite, and vermiculite , 1992 .

[71]  T. Leisinger,et al.  Anaerobic degradation of tetrachloromethane by Acetobacterium woodii: separation of dechlorinative activities in cell extracts and roles for vitamin B12 and other factors , 1992, Biodegradation.

[72]  D. A. Bender,et al.  Concentrations and co-occurrence correlations of 88 volatile organic compounds (VOCs) in the ambient air of 13 semi-rural to urban locations in the United States , 2003 .

[73]  J. Savéant,et al.  Stepwise and concerted pathways in photoinduced and thermal electron-transfer/bond-breaking reactions. experimental illustration of similarities and contrasts. , 2001, Journal of the American Chemical Society.

[74]  Paul G Tratnyek,et al.  One-Electron Reduction of Substituted Chlorinated Methanes as Determined from Ab Initio Electronic Structure Theory , 2002 .

[75]  C. Criddle,et al.  Electrolytic model system for reductive dehalogenation in aqueous environments , 1991 .

[76]  L. Curtiss,et al.  Assessment of Gaussian-2 and density functional theories for the computation of enthalpies of formation , 1997 .

[77]  W. A. Jong,et al.  Performance of coupled cluster theory in thermochemical calculations of small halogenated compounds , 2003 .

[78]  Jacopo Tomasi,et al.  A new definition of cavities for the computation of solvation free energies by the polarizable continuum model , 1997 .

[79]  M. Tissandier,et al.  The Proton's Absolute Aqueous Enthalpy and Gibbs Free Energy of Solvation from Cluster-Ion Solvation Data , 1998 .

[80]  Orlando Tapia,et al.  Solvent effects and chemical reactivity , 2002 .

[81]  P. Roberts,et al.  Effects of solute concentration and cosolvents on the aqueous activity coefficient of halogenated hydrocarbons. , 1986, Environmental science & technology.

[82]  R. Venkatapathy,et al.  Linear Free Energy Relationships for Polyhalogenated Alkane Transformation by Electron-Transfer Mediators in Model Aqueous Systems , 2000 .

[83]  K. Sharp,et al.  Accurate Calculation of Hydration Free Energies Using Macroscopic Solvent Models , 1994 .

[84]  C. E. Castro,et al.  Oxidation of iron (II) porphyrins by alkyl halides. , 1973, Journal of the American Chemical Society.

[85]  Paul G Tratnyek,et al.  Evidence for localization of reaction upon reduction of carbon tetrachloride by Granular iron , 2002 .

[86]  J. Tomasi,et al.  Dispersion and repulsion contributions to the solvation energy: Refinements to a simple computational model in the continuum approximation , 1991 .

[87]  M. Reinhard,et al.  Reductive dehalogenation of hexachloroethane, carbon tetrachloride, and bromoform by anthrahydroquinone disulfonate and humic Acid. , 1994, Environmental science & technology.

[88]  A. D. McLean,et al.  Theoretical investigation of the anaerobic reduction of halogenated alkanes by cytochrome P-450. 2. Vertical electron affinities of chlorofluoromethanes as a measure of their activity , 1988 .

[89]  John A. Cherry,et al.  Dense Chlorinated Solvents and other DNAPLs in Groundwater , 1996 .

[90]  A. Becke,et al.  Density-functional exchange-energy approximation with correct asymptotic behavior. , 1988, Physical review. A, General physics.

[91]  D. Dixon,et al.  Accurate Calculations of the Electron Affinity and Ionization Potential of the Methyl Radical , 1997 .

[92]  Thom H. Dunning,et al.  Gaussian basis sets for use in correlated molecular calculations. V. Core-valence basis sets for boron through neon , 1995 .

[93]  P. Hohenberg,et al.  Inhomogeneous Electron Gas , 1964 .

[94]  Parr,et al.  Development of the Colle-Salvetti correlation-energy formula into a functional of the electron density. , 1988, Physical review. B, Condensed matter.

[95]  K. Hayes,et al.  Kinetics of the Transformation of Halogenated Aliphatic Compounds by Iron Sulfide , 2000 .

[96]  Dennis R. Salahub,et al.  Optimization of Gaussian-type basis sets for local spin density functional calculations. Part I. Boron through neon, optimization technique and validation , 1992 .

[97]  J. Farrell,et al.  Electrochemical investigation of the rate-limiting mechanisms for trichloroethylene and carbon tetrachloride reduction at iron surfaces. , 2001, Environmental science & technology.

[98]  Wang,et al.  Accurate and simple analytic representation of the electron-gas correlation energy. , 1992, Physical review. B, Condensed matter.

[99]  C. Cramer,et al.  Reductive dechlorination of hexachloroethane in the environment: mechanistic studies via computational electrochemistry. , 2001, Journal of the American Chemical Society.

[100]  J. Pople,et al.  Self‐consistent molecular orbital methods. XX. A basis set for correlated wave functions , 1980 .