Single-Molecule Studies of Biomolecules
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Michael B. Feldman | Michael B. Feldman | James B. Munro | Scott C. Blanchard | Roger B. Altman | Peter Geggier | James B. Munro | Richa Dave | Daniel S. Terry | S. Blanchard | P. Geggier | R. Altman | Richa Dave
[1] W. E. Moerner,et al. ADP-induced rocking of the kinesin motor domain revealed by single-molecule fluorescence polarization microscopy , 2001, Nature Structural Biology.
[2] S. McKinney,et al. Nonblinking and long-lasting single-molecule fluorescence imaging , 2006, Nature Methods.
[3] K. Schulten,et al. Fluorescence-Force Spectroscopy Maps Two-Dimensional Reaction Landscape of the Holliday Junction , 2007, Science.
[4] S. McKinney,et al. Analysis of single-molecule FRET trajectories using hidden Markov modeling. , 2006, Biophysical journal.
[5] Peter Michaely,et al. Nanospring behaviour of ankyrin repeats , 2006, Nature.
[6] Michael Sheetz,et al. Magnetic tweezers in cell biology. , 2007, Methods in cell biology.
[7] R. Hochstrasser,et al. Peptidyl transferase center activity observed in single ribosomes. , 1999, Journal of molecular biology.
[8] Kiwamu Saito,et al. Imaging of single fluorescent molecules and individual ATP turnovers by single myosin molecules in aqueous solution , 1995, Nature.
[9] R. Tsien,et al. green fluorescent protein , 2020, Catalysis from A to Z.
[10] L. Isaksson,et al. Morphological variation of individual Escherichia coli 50S ribosomal subunits in situ, as revealed by cryo-electron tomography. , 2004, Experimental cell research.
[11] Julio M Fernandez,et al. Single-molecule force spectroscopy reveals signatures of glassy dynamics in the energy landscape of ubiquitin , 2006 .
[12] Paul Matsudaira,et al. Detecting force-induced molecular transitions with fluorescence resonant energy transfer. , 2007, Angewandte Chemie.
[13] M. Sheetz,et al. Tracking kinesin-driven movements with nanometre-scale precision , 1988, Nature.
[14] Antoine M. van Oijen,et al. Ever-fluctuating single enzyme molecules: Michaelis-Menten equation revisited , 2006, Nature chemical biology.
[15] R Y Tsien,et al. Specific covalent labeling of recombinant protein molecules inside live cells. , 1998, Science.
[16] M. Sisido,et al. A non‐natural amino acid for efficient incorporation into proteins as a sensitive fluorescent probe , 2001, FEBS letters.
[17] J. Puglisi,et al. tRNA selection and kinetic proofreading in translation , 2004, Nature Structural &Molecular Biology.
[18] Dong-Myung Kim,et al. Fluorescent labeling of cell-free synthesized proteins by incorporation of fluorophore-conjugated nonnatural amino acids. , 2007, Analytical biochemistry.
[19] Nam Ki Lee,et al. Single-molecule approach to molecular biology in living bacterial cells. , 2008, Annual review of biophysics.
[20] X. Zhuang. Single-molecule RNA science. , 2005, Annual review of biophysics and biomolecular structure.
[21] Taekjip Ha,et al. Initiation and re-initiation of DNA unwinding by the Escherichia coli Rep helicase , 2002, Nature.
[22] S. Weiss,et al. Single-molecule fluorescence studies of protein folding and conformational dynamics. , 2006, Chemical reviews.
[23] N. Friedman,et al. Stochastic protein expression in individual cells at the single molecule level , 2006, Nature.
[24] P. Schultz,et al. A genetically encoded fluorescent amino acid. , 2006, Journal of the American Chemical Society.
[25] M. Rief,et al. Direct observation of active protein folding using lock-in force spectroscopy. , 2007, Biophysical journal.
[26] C. Bustamante,et al. Mechanics and structure of titin oligomers explored with atomic force microscopy. , 2003, Biochimica et biophysica acta.
[27] Shimon Weiss,et al. Initial Transcription by RNA Polymerase Proceeds Through a DNA-Scrunching Mechanism , 2006, Science.
[28] W E Moerner,et al. Diffusion of lipid-like single-molecule fluorophores in the cell membrane. , 2006, The journal of physical chemistry. B.
[29] X. Xie,et al. Single-molecule enzymatic dynamics. , 1998, Science.
[30] M. Rodnina,et al. Mechanisms of elongation on the ribosome: dynamics of a macromolecular machine. , 2004, Biochemical Society transactions.
[31] D. F. Ogletree,et al. Probing the interaction between single molecules: fluorescence resonance energy transfer between a single donor and a single acceptor , 1996, Summaries of Papers Presented at the Quantum Electronics and Laser Science Conference.
[32] J. van Noort,et al. Subpiconewton dynamic force spectroscopy using magnetic tweezers. , 2008, Biophysical journal.
[33] Steven Chu,et al. tRNA dynamics on the ribosome during translation. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[34] Masayuki Abe,et al. Chemical identification of individual surface atoms by atomic force microscopy , 2007, Nature.
[35] Chris H Wiggins,et al. Fast dynamics of supercoiled DNA revealed by single-molecule experiments , 2007, Proceedings of the National Academy of Sciences.
[36] J. Spudich,et al. Single molecule high-resolution colocalization of Cy3 and Cy5 attached to macromolecules measures intramolecular distances through time. , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[37] T. Ha,et al. Single-molecule fluorescence resonance energy transfer. , 2001, Methods.
[38] D. Lilley,et al. Vesicle encapsulation studies reveal that single molecule ribozyme heterogeneities are intrinsic. , 2004, Biophysical journal.
[39] W. Greenleaf,et al. High-resolution, single-molecule measurements of biomolecular motion. , 2007, Annual review of biophysics and biomolecular structure.
[40] J. Zlatanova,et al. Single molecule force spectroscopy in biology using the atomic force microscope. , 2000, Progress in biophysics and molecular biology.
[41] B. Sakmann,et al. Improved patch-clamp techniques for high-resolution current recording from cells and cell-free membrane patches , 1981, Pflügers Archiv.
[42] W. Baumeister,et al. Macromolecular Architecture in Eukaryotic Cells Visualized by Cryoelectron Tomography , 2002, Science.
[43] Axel T. Brunger,et al. Single-molecule studies of SNARE complex assembly reveal parallel and antiparallel configurations , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[44] S. Yokoyama,et al. Site-specific fluorescent labeling of RNA molecules by specific transcription using unnatural base pairs. , 2005, Journal of the American Chemical Society.
[45] Paul R. Selvin,et al. Myosin V Walks Hand-Over-Hand: Single Fluorophore Imaging with 1.5-nm Localization , 2003, Science.
[46] T. Muir. Semisynthesis of proteins by expressed protein ligation. , 2003, Annual review of biochemistry.
[47] Eric C Greene,et al. Organized arrays of individual DNA molecules tethered to supported lipid bilayers. , 2006, Langmuir : the ACS journal of surfaces and colloids.
[48] B. Cooperman,et al. Protein synthesis by single ribosomes. , 2003, RNA.
[49] C. Joo,et al. Fueling protein–DNA interactions inside porous nanocontainers , 2007, Proceedings of the National Academy of Sciences.
[50] Ignacio Tinoco,et al. Following translation by single ribosomes one codon at a time , 2008, Nature.
[51] Michael D. Stone,et al. Stepwise protein-mediated RNA folding directs assembly of telomerase ribonucleoprotein , 2007, Nature.
[52] T. Ha,et al. Bridging conformational dynamics and function using single-molecule spectroscopy. , 2006, Structure.
[53] X. Xie,et al. Optical studies of single molecules at room temperature. , 1998, Annual review of physical chemistry.
[54] W. Stemmer,et al. Improved Green Fluorescent Protein by Molecular Evolution Using DNA Shuffling , 1996, Nature Biotechnology.
[55] E. Greene,et al. Long-distance lateral diffusion of human Rad51 on double-stranded DNA , 2006, Proceedings of the National Academy of Sciences of the United States of America.
[56] X. Zhuang,et al. Correlating Structural Dynamics and Function in Single Ribozyme Molecules , 2002, Science.
[57] Carlos Bustamante,et al. Recent advances in optical tweezers. , 2008, Annual review of biochemistry.
[58] B. Chait,et al. Domain-specific incorporation of noninvasive optical probes into recombinant proteins. , 2004, Journal of the American Chemical Society.
[59] R. Benesch,et al. Enzymatic removal of oxygen for polarography and related methods. , 1953, Science.
[60] Toshio Yanagida,et al. Direct observation of single kinesin molecules moving along microtubules , 1996, Nature.
[61] D. Lohr,et al. Using atomic force microscopy to study chromatin structure and nucleosome remodeling. , 2007, Methods.
[62] P. Arimondo,et al. Single-molecule observations of topotecan-mediated TopIB activity at a unique DNA sequence , 2008, Nucleic acids research.
[63] M. Visnapuu,et al. The importance of surfaces in single-molecule bioscience. , 2008, Molecular bioSystems.
[64] C. Joo,et al. Advances in single-molecule fluorescence methods for molecular biology. , 2008, Annual review of biochemistry.
[65] S. Turner,et al. Zero-Mode Waveguides for Single-Molecule Analysis at High Concentrations , 2003, Science.
[66] Hernando Sosa,et al. Configuration of the two kinesin motor domains during ATP hydrolysis , 2003, Nature Structural Biology.
[67] Colin Echeverría Aitken,et al. An oxygen scavenging system for improvement of dye stability in single-molecule fluorescence experiments. , 2008, Biophysical journal.
[68] D. Lohr,et al. Solution AFM studies of human Swi-Snf and its interactions with MMTV DNA and chromatin. , 2005, Biophysical journal.
[69] W E Moerner,et al. Single-molecule fluorescence spectroscopy and microscopy of biomolecular motors. , 2004, Annual review of physical chemistry.
[70] Joachim Frank,et al. Electron tomographic and other approaches for imaging molecular machines , 2001, Current Opinion in Neurobiology.
[71] R E Glass,et al. Visualization of single molecules of RNA polymerase sliding along DNA. , 1993, Science.
[72] Cheng Zhu,et al. Direct observation of catch bonds involving cell-adhesion molecules , 2003, Nature.
[73] Takeharu Nagai,et al. Shift anticipated in DNA microarray market , 2002, Nature Biotechnology.
[74] X. Zhuang,et al. Ligand-induced conformational changes observed in single RNA molecules. , 1999, Proceedings of the National Academy of Sciences of the United States of America.
[75] E. Elson,et al. Fluorescence correlation spectroscopy. I. Conceptual basis and theory , 1974 .
[76] S. Quake,et al. Single-Molecule DNA Sequencing of a Viral Genome , 2008, Science.
[77] P. Tavan,et al. Ligand Binding: Molecular Mechanics Calculation of the Streptavidin-Biotin Rupture Force , 1996, Science.
[78] Taekjip Ha,et al. Mg2+-dependent conformational change of RNA studied by fluorescence correlation and FRET on immobilized single molecules , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[79] Samara L. Reck-Peterson,et al. Force-Induced Bidirectional Stepping of Cytoplasmic Dynein , 2007, Cell.
[80] Michio Homma,et al. Direct observation of steps in rotation of the bacterial flagellar motor , 2005, Nature.
[81] Christian Eggeling,et al. Strategies to improve photostabilities in ultrasensitive fluorescence spectroscopy. , 2007, The journal of physical chemistry. A.
[82] Sotaro Uemura,et al. Peptide bond formation destabilizes Shine–Dalgarno interaction on the ribosome , 2007, Nature.
[83] R. Vale,et al. Circularization of mRNA by eukaryotic translation initiation factors. , 1998, Molecular cell.
[84] R. Ebright,et al. Site-specific incorporation of fluorescent probes into protein: hexahistidine-tag-mediated fluorescent labeling with (Ni(2+):nitrilotriacetic Acid (n)-fluorochrome conjugates. , 2001, Journal of the American Chemical Society.
[85] X. Zhuang,et al. A single-molecule study of RNA catalysis and folding. , 2000, Science.
[86] Kazuhiko Kinosita,et al. Direct observation of the rotation of F1-ATPase , 1997, Nature.
[87] Rahul Roy,et al. A practical guide to single-molecule FRET , 2008, Nature Methods.
[88] Niels Galjart,et al. Cryo electron tomography of vitrified fibroblasts: microtubule plus ends in situ. , 2008, Journal of structural biology.
[89] R. Lavery,et al. Wringing out DNA. , 2006, Physical review letters.
[90] J. Elf,et al. Probing Transcription Factor Dynamics at the Single-Molecule Level in a Living Cell , 2007, Science.
[91] L. Stryer,et al. Energy transfer: a spectroscopic ruler. , 1967, Proceedings of the National Academy of Sciences of the United States of America.
[92] X. Xie,et al. Probing Gene Expression in Live Cells, One Protein Molecule at a Time , 2006, Science.
[93] W E Moerner,et al. Polarized fluorescence microscopy of individual and many kinesin motors bound to axonemal microtubules. , 2001, Biophysical journal.
[94] J. Jaiswal,et al. Potentials and pitfalls of fluorescent quantum dots for biological imaging. , 2004, Trends in cell biology.
[95] X. Darzacq,et al. In vivo dynamics of RNA polymerase II transcription , 2007, Nature Structural &Molecular Biology.
[96] P. Schwille,et al. Fluorescence correlation spectroscopy: novel variations of an established technique. , 2007, Annual review of biophysics and biomolecular structure.
[97] G. Wagner,et al. Translation initiation: structures, mechanisms and evolution , 2004, Quarterly Reviews of Biophysics.
[98] Ben Fabry,et al. High-force magnetic tweezers with force feedback for biological applications. , 2007, The Review of scientific instruments.
[99] H. Berg,et al. Torque generated by the flagellar motor of Escherichia coli. , 1993, Biophysical journal.
[100] S. Gambhir,et al. Quantum Dots for Live Cells, in Vivo Imaging, and Diagnostics , 2005, Science.
[101] Peter G Schultz,et al. Efficient incorporation of unnatural amino acids into proteins in Escherichia coli , 2006, Nature Methods.
[102] R. Merkel,et al. Energy landscapes of receptor–ligand bonds explored with dynamic force spectroscopy , 1999, Nature.
[103] T. Strick,et al. Twisting and stretching single DNA molecules. , 2000, Progress in biophysics and molecular biology.
[104] M. Howarth,et al. Site-specific labeling of cell surface proteins with biophysical probes using biotin ligase , 2005, Nature Methods.
[105] W. Greenleaf,et al. Single-molecule studies of RNA polymerase: motoring along. , 2008, Annual review of biochemistry.
[106] S. Quake,et al. Sequence information can be obtained from single DNA molecules , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[107] D. Lilley,et al. Structural dynamics of individual Holliday junctions , 2003, Nature Structural Biology.
[108] E. Cox,et al. Real-Time Kinetics of Gene Activity in Individual Bacteria , 2005, Cell.
[109] X. Xie,et al. Single-molecule approach to dispersed kinetics and dynamic disorder: Probing conformational fluctuation and enzymatic dynamics , 2002 .
[110] C. Larabell,et al. Quantum dots as cellular probes. , 2005, Annual review of biomedical engineering.
[111] Nathan O'Connor,et al. Identification of two distinct hybrid state intermediates on the ribosome. , 2007, Molecular cell.
[112] Scott Forth,et al. Nanofabricated quartz cylinders for angular trapping: DNA supercoiling torque detection , 2007, Nature Methods.