Comparison of short-channel separation and spatial domain filtering for removal of non-neural components in functional near-infrared spectroscopy signals

Abstract. Significance: With the increasing popularity of functional near-infrared spectroscopy (fNIRS), the need to determine localization of the source and nature of the signals has grown. Aim: We compare strategies for removal of non-neural signals for a finger-thumb tapping task, which shows responses in contralateral motor cortex and a visual checkerboard viewing task that produces activity within the occipital lobe. Approach: We compare temporal regression strategies using short-channel separation to a spatial principal component (PC) filter that removes global signals present in all channels. For short-channel temporal regression, we compare non-neural signal removal using first and combined first and second PCs from a broad distribution of short channels to limited distribution on the forehead. Results: Temporal regression of non-neural information from broadly distributed short channels did not differ from forehead-only distribution. Spatial PC filtering provides results similar to short-channel separation using the temporal domain. Utilizing both first and second PCs from short channels removes additional non-neural information. Conclusions: We conclude that short-channel information in the temporal domain and spatial domain regression filtering methods remove similar non-neural components represented in scalp hemodynamics from fNIRS signals and that either technique is sufficient to remove non-neural components.

[1]  Emery N Brown,et al.  Adaptive filtering to reduce global interference in evoked brain activity detection: a human subject case study. , 2007, Journal of biomedical optics.

[2]  J. Hirsch,et al.  A cross-brain neural mechanism for human-to-human verbal communication , 2018, Social cognitive and affective neuroscience.

[3]  D. Delpy,et al.  Performance comparison of several published tissue near-infrared spectroscopy algorithms. , 1995, Analytical biochemistry.

[4]  David A Boas,et al.  Eigenvector-based spatial filtering for reduction of physiological interference in diffuse optical imaging. , 2005, Journal of biomedical optics.

[5]  David A. Boas,et al.  A temporal comparison of BOLD, ASL, and NIRS hemodynamic responses to motor stimuli in adult humans , 2006, NeuroImage.

[6]  Gary H. Glover,et al.  A quantitative comparison of NIRS and fMRI across multiple cognitive tasks , 2011, NeuroImage.

[7]  J. Hirsch,et al.  Motor learning and modulation of prefrontal cortex: an fNIRS assessment , 2015, Journal of neural engineering.

[8]  J. Culver,et al.  Brain Specificity of Diffuse Optical Imaging: Improvements from Superficial Signal Regression and Tomography , 2010, Front. Neuroenerg..

[9]  Arcangelo Merla,et al.  A novel GLM-based method for the Automatic IDentification of functional Events (AIDE) in fNIRS data recorded in naturalistic environments , 2017, NeuroImage.

[10]  Richard N. Aslin,et al.  Top-down modulation in the infant brain: Learning-induced expectations rapidly affect the sensory cortex at 6 months , 2015, Proceedings of the National Academy of Sciences.

[11]  David A. Boas,et al.  Short separation channel location impacts the performance of short channel regression in NIRS , 2012, NeuroImage.

[12]  J. Hirsch,et al.  Neural processes for live pro-social dialogue between dyads with socioeconomic disparity , 2020, Social cognitive and affective neuroscience.

[13]  Sungho Tak,et al.  NIRS-SPM: Statistical parametric mapping for near-infrared spectroscopy , 2009, NeuroImage.

[14]  Abraham Z. Snyder,et al.  A quantitative spatial comparison of high-density diffuse optical tomography and fMRI cortical mapping , 2012, NeuroImage.

[15]  Lauren L Emberson,et al.  Hemodynamic correlates of cognition in human infants. , 2015, Annual review of psychology.

[16]  Lian Duan,et al.  Wavelet-based method for removing global physiological noise in functional near-infrared spectroscopy. , 2018, Biomedical optics express.

[17]  Emery N Brown,et al.  Adaptive filtering for global interference cancellation and real-time recovery of evoked brain activity: a Monte Carlo simulation study. , 2007, Journal of biomedical optics.

[18]  Yumie Ono,et al.  Real-Time Eye-to-Eye Contact Is Associated With Cross-Brain Neural Coupling in Angular Gyrus , 2020, Frontiers in Human Neuroscience.

[19]  D. Boas,et al.  Determination of optical properties and blood oxygenation in tissue using continuous NIR light , 1995, Physics in medicine and biology.

[20]  Reiko Kawagoe,et al.  Influence of skin blood flow on near-infrared spectroscopy signals measured on the forehead during a verbal fluency task , 2011, NeuroImage.

[21]  F. Scholkmann,et al.  Impact of Changes in Systemic Physiology on fNIRS/NIRS Signals: Analysis Based on Oblique Subspace Projections Decomposition. , 2018, Advances in experimental medicine and biology.

[22]  Marco Ferrari,et al.  A brief review on the history of human functional near-infrared spectroscopy (fNIRS) development and fields of application , 2012, NeuroImage.

[23]  Heidrun Wabnitz,et al.  The physiological origin of task-evoked systemic artefacts in functional near infrared spectroscopy , 2012, NeuroImage.

[24]  Swethasri Dravida,et al.  Signal processing of functional NIRS data acquired during overt speaking , 2017, Neurophotonics.

[25]  Hiroshi Ishiguro,et al.  An Information-Theoretic Approach to Quantitative Analysis of the Correspondence Between Skin Blood Flow and Functional Near-Infrared Spectroscopy Measurement in Prefrontal Cortex Activity , 2019, Front. Neurosci..

[26]  Martin Wolf,et al.  Short-channel regression in functional near-infrared spectroscopy is more effective when considering heterogeneous scalp hemodynamics , 2020, Neurophotonics.

[27]  I. Miyai,et al.  Removal of the skin blood flow artifact in functional near-infrared spectroscopic imaging data through independent component analysis. , 2007, Journal of biomedical optics.

[28]  Takashi Morishita,et al.  Changes in Motor-Related Cortical Activity Following Deep Brain Stimulation for Parkinson’s Disease Detected by Functional Near Infrared Spectroscopy: A Pilot Study , 2016, Front. Hum. Neurosci..

[30]  Jonathan W. Peirce,et al.  PsychoPy—Psychophysics software in Python , 2007, Journal of Neuroscience Methods.

[31]  Steve W. C. Chang,et al.  Distributed Neural Activity Patterns during Human-to-Human Competition , 2017, Front. Hum. Neurosci..

[32]  M. Ferrari,et al.  Cerebral blood volume and hemoglobin oxygen saturation monitoring in neonatal brain by near IR spectroscopy. , 1986, Advances in experimental medicine and biology.

[33]  Martin Wolf,et al.  A review on continuous wave functional near-infrared spectroscopy and imaging instrumentation and methodology , 2014, NeuroImage.

[34]  Di Yuan,et al.  Interplay between prior knowledge and communication mode on teaching effectiveness: Interpersonal neural synchronization as a neural marker , 2019, NeuroImage.

[35]  J. Hirsch,et al.  Concordance between Functional Magnetic Resonance Imaging and Intraoperative Language Mapping , 2000, Stereotactic and Functional Neurosurgery.

[36]  Masa-aki Sato,et al.  Reduction of global interference of scalp-hemodynamics in functional near-infrared spectroscopy using short distance probes , 2016, NeuroImage.

[37]  Yumie Ono,et al.  fMRI Validation of fNIRS Measurements During a Naturalistic Task , 2015, Journal of visualized experiments : JoVE.

[38]  Masako Okamoto,et al.  Automated cortical projection of head-surface locations for transcranial functional brain mapping , 2005, NeuroImage.

[39]  David A. Boas,et al.  Using the General Linear Model to Improve Performance in fNIRS Single Trial Analysis and Classification: A Perspective , 2020, Frontiers in Human Neuroscience.

[40]  Heidrun Wabnitz,et al.  Identifying and quantifying main components of physiological noise in functional near infrared spectroscopy on the prefrontal cortex , 2013, Front. Hum. Neurosci..

[41]  Meryem A Yücel,et al.  Short separation regression improves statistical significance and better localizes the hemodynamic response obtained by near-infrared spectroscopy for tasks with differing autonomic responses , 2015, Neurophotonics.

[42]  J. Hirsch,et al.  Communication of emotion via drumming: dual-brain imaging with functional near-infrared spectroscopy , 2018, Social cognitive and affective neuroscience.

[43]  Abraham Z. Snyder,et al.  Atlas-based head modeling and spatial normalization for high-density diffuse optical tomography: In vivo validation against fMRI , 2014, NeuroImage.

[44]  Andrew K. Fishell,et al.  Mapping brain function during naturalistic viewing using high-density diffuse optical tomography , 2019, Scientific Reports.

[45]  Y. Hoshi Functional near-infrared optical imaging: utility and limitations in human brain mapping. , 2003, Psychophysiology.

[46]  J. Brazy,et al.  Noninvasive monitoring of cerebral oxygenation in preterm infants: preliminary observations. by brazy je, lewis dv, mitnick mh, and joubsis vander vliet ff. pediatrics 1985; 75:217–225 , 1985, Pediatrics.

[47]  Joy Hirsch,et al.  Separation of the global and local components in functional near-infrared spectroscopy signals using principal component spatial filtering , 2016, Neurophotonics.

[48]  Xuetong Zhai,et al.  Quantitative comparison of correction techniques for removing systemic physiological signal in functional near-infrared spectroscopy studies , 2020, Neurophotonics.

[49]  Martin Wolf,et al.  End-tidal CO2: An important parameter for a correct interpretation in functional brain studies using speech tasks , 2013, NeuroImage.

[50]  Lei Ding,et al.  Superficial Fluctuations in Functional Near-Infrared Spectroscopy , 2019, 2019 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC).

[51]  Mahlega S. Hassanpour,et al.  Mapping distributed brain function and networks with diffuse optical tomography , 2014, Nature Photonics.

[52]  David A. Boas,et al.  Improved recovery of the hemodynamic response in diffuse optical imaging using short optode separations and state-space modeling , 2011, NeuroImage.

[53]  M. Beauchamp,et al.  Neuroimaging with near-infrared spectroscopy demonstrates speech-evoked activity in the auditory cortex of deaf children following cochlear implantation , 2010, Hearing Research.

[54]  F. Jöbsis Noninvasive, infrared monitoring of cerebral and myocardial oxygen sufficiency and circulatory parameters. , 1977, Science.

[55]  Xu Xu,et al.  Multiregional functional near-infrared spectroscopy reveals globally symmetrical and frequency-specific patterns of superficial interference. , 2015, Biomedical optics express.

[56]  Lauren L Emberson,et al.  Isolating the effects of surface vasculature in infant neuroimaging using short-distance optical channels: a combination of local and global effects , 2016, Neurophotonics.

[57]  David A. Boas,et al.  Near-infrared spectroscopy shows right parietal specialization for number in pre-verbal infants , 2010, NeuroImage.

[58]  Arcangelo Merla,et al.  Using Fiberless, Wearable fNIRS to Monitor Brain Activity in Real-world Cognitive Tasks , 2015, Journal of visualized experiments : JoVE.

[59]  N. Tzourio-Mazoyer,et al.  Automated Anatomical Labeling of Activations in SPM Using a Macroscopic Anatomical Parcellation of the MNI MRI Single-Subject Brain , 2002, NeuroImage.

[60]  Felix Scholkmann,et al.  Signal Processing in Functional Near-Infrared Spectroscopy (fNIRS): Methodological Differences Lead to Different Statistical Results , 2018, Front. Hum. Neurosci..

[61]  Hiroki Sato,et al.  Quantitative evaluation of deep and shallow tissue layers' contribution to fNIRS signal using multi-distance optodes and independent component analysis , 2014, NeuroImage.

[62]  J. Hirsch,et al.  An Integrated Functional Magnetic Resonance Imaging Procedure for Preoperative Mapping of Cortical Areas Associated with Tactile, Motor, Language, and Visual Functions , 2000, Neurosurgery.

[63]  S. Umeyama,et al.  Multidistance probe arrangement to eliminate artifacts in functional near-infrared spectroscopy. , 2009, Journal of biomedical optics.

[64]  Archana K. Singh,et al.  Spatial registration of multichannel multi-subject fNIRS data to MNI space without MRI , 2005, NeuroImage.

[65]  R. C. Oldfield The assessment and analysis of handedness: the Edinburgh inventory. , 1971, Neuropsychologia.

[66]  Quan Zhang,et al.  Adaptive filtering to reduce global interference in non-invasive NIRS measures of brain activation: How well and when does it work? , 2009, NeuroImage.

[67]  J Mazziotta,et al.  A probabilistic atlas and reference system for the human brain: International Consortium for Brain Mapping (ICBM). , 2001, Philosophical transactions of the Royal Society of London. Series B, Biological sciences.

[68]  Ilias Tachtsidis,et al.  False positives and false negatives in functional near-infrared spectroscopy: issues, challenges, and the way forward , 2016, Neurophotonics.

[69]  Rolf B. Saager,et al.  Two-detector Corrected Near Infrared Spectroscopy (C-NIRS) detects hemodynamic activation responses more robustly than single-detector NIRS , 2011, NeuroImage.

[70]  Felix Scholkmann,et al.  Frontal cerebral oxygenation asymmetry: intersubject variability and dependence on systemic physiology, season, and time of day , 2020, Neurophotonics.

[71]  Swethasri Dravida,et al.  Comparison of oxyhemoglobin and deoxyhemoglobin signal reliability with and without global mean removal for digit manipulation motor tasks , 2017, Neurophotonics.

[72]  David A. Boas,et al.  Improved physiological noise regression in fNIRS: A multimodal extension of the General Linear Model using temporally embedded Canonical Correlation Analysis , 2019, NeuroImage.

[73]  Takahiro Ikeda,et al.  Atypical neural modulation in the right prefrontal cortex during an inhibitory task with eye gaze in autism spectrum disorder as revealed by functional near-infrared spectroscopy , 2018, Neurophotonics.

[74]  David A. Boas,et al.  Twenty years of functional near-infrared spectroscopy: introduction for the special issue , 2014, NeuroImage.

[75]  J. Hirsch,et al.  Neural correlates of conflict between gestures and words: A domain-specific role for a temporal-parietal complex , 2017, PloS one.

[76]  M. Tamura,et al.  Quantitative analysis of hemoglobin oxygenation state of rat brain in situ by near-infrared spectrophotometry. , 1988, Journal of applied physiology.