Generic Properties of the Sequence-Structure Relations of Biopolymers

[1]  T. Jukes,et al.  The neutral theory of molecular evolution. , 2000, Genetics.

[2]  Peter F. Stadler,et al.  Fitness landscapes arising from the sequence-structure maps of biopolymers , 1999 .

[3]  E. Bornberg-Bauer,et al.  How are model protein structures distributed in sequence space? , 1997, Biophysical journal.

[4]  Christian M. Reidys,et al.  Random Induced Subgraphs of Generalizedn-Cubes , 1997 .

[5]  P. Stadler,et al.  Neutral networks in protein space: a computational study based on knowledge-based potentials of mean force. , 1997, Folding & design.

[6]  P. Schuster Landscapes and molecular evolution , 1997 .

[7]  P. Schuster,et al.  Generic properties of combinatory maps: neutral networks of RNA secondary structures. , 1997, Bulletin of mathematical biology.

[8]  Chris Sander,et al.  Dali/FSSP classification of three-dimensional protein folds , 1997, Nucleic Acids Res..

[9]  N. Wingreen,et al.  Emergence of Preferred Structures in a Simple Model of Protein Folding , 1996, Science.

[10]  P. Schuster,et al.  Algorithm independent properties of RNA secondary structure predictions , 1996, European Biophysics Journal.

[11]  P. Schuster,et al.  Analysis of RNA sequence structure maps by exhaustive enumeration II. Structures of neutral networks and shape space covering , 1996 .

[12]  Christian M. Reidys,et al.  Bio-molecular Shapes and Algebraic Structures , 1996, Comput. Chem..

[13]  M. Huynen,et al.  Smoothness within ruggedness: the role of neutrality in adaptation. , 1996, Proceedings of the National Academy of Sciences of the United States of America.

[14]  P. Schuster,et al.  Analysis of RNA sequence structure maps by exhaustive enumeration I. Neutral networks , 1995 .

[15]  P. Schuster,et al.  How to search for RNA structures. Theoretical concepts in evolutionary biotechnology. , 1995, Journal of biotechnology.

[16]  P. Schuster,et al.  From sequences to shapes and back: a case study in RNA secondary structures , 1994, Proceedings of the Royal Society of London. Series B: Biological Sciences.

[17]  Walter Fontana,et al.  Fast folding and comparison of RNA secondary structures , 1994 .

[18]  Manfred J. Sippl,et al.  Boltzmann's principle, knowledge-based mean fields and protein folding. An approach to the computational determination of protein structures , 1993, J. Comput. Aided Mol. Des..

[19]  C. Chothia One thousand families for the molecular biologist , 1992, Nature.

[20]  M J Sippl,et al.  Structure-derived hydrophobic potential. Hydrophobic potential derived from X-ray structures of globular proteins is able to identify native folds. , 1992, Journal of molecular biology.

[21]  C. Chothia Proteins. One thousand families for the molecular biologist. , 1992, Nature.

[22]  D. Lipman,et al.  Modelling neutral and selective evolution of protein folding , 1991, Proceedings of the Royal Society of London. Series B: Biological Sciences.

[23]  D. Eisenberg,et al.  A method to identify protein sequences that fold into a known three-dimensional structure. , 1991, Science.

[24]  P. Schuster,et al.  A computer model of evolutionary optimization. , 1987, Biophysical chemistry.

[25]  D. Turner,et al.  Improved free-energy parameters for predictions of RNA duplex stability. , 1986, Proceedings of the National Academy of Sciences of the United States of America.

[26]  D. Sankoff,et al.  RNA secondary structures and their prediction , 1984 .

[27]  M. Kimura The Neutral Theory of Molecular Evolution: Introduction , 1983 .

[28]  John Maynard Smith,et al.  Natural Selection and the Concept of a Protein Space , 1970, Nature.

[29]  J. Maynard Smith Natural Selection and the Concept of a Protein Space , 1970 .