Cancer Classification using improved Extreme Learning Machine

In recent years there has been explosion in the amount and complexity of micro-array datasets obtained from various biological experiments and many community research. These datasets when utilized efficiently can help in building of complex disease prognosis systems. Efficient and accurate classification model is needed for analysis and interpretation of these datasets. Extreme Learning Machine (ELM) has been catering the attention for training single-layer feed forward network (SLFN) by providing higher performance in terms of fast learning speed and better accuracy. The efficiency of these models are heavily dependent on the selection of network parameters which involves hidden weights and biases. Therefore, many evolutionary algorithms have been used to enhance the performance of ELM. However, these evolutionary approaches are limited to explore the global search space, i.e. diversification. In order to obtain high quality solution, along with diversification searching the local neighbourhood i.e, intensification is required. In the proposed work, a novel method is developed where Jaya optimization algorithm and Simulated Annealing (SA) is together implemented to produce a profitable synergy. Further, adaptive technique is introduced to enhance the search process. Comparison and experiments on five micro-array datasets reveals the robustness of the proposed ELM models. The experimental results demonstrate that the proposed hybridized ELM are better than the original ELM algorithm and other existing state-of-art in terms of accuracy and efficiency.

[1]  Zaher Mundher Yaseen,et al.  An enhanced extreme learning machine model for river flow forecasting: State-of-the-art, practical applications in water resource engineering area and future research direction , 2019, Journal of Hydrology.

[2]  Ravinesh C. Deo,et al.  Self-adaptive differential evolutionary extreme learning machines for long-term solar radiation prediction with remotely-sensed MODIS satellite and Reanalysis atmospheric products in solar-rich cities , 2018, Remote Sensing of Environment.

[3]  Khan Muhammad,et al.  Analysis of high-dimensional genomic data employing a novel bio-inspired algorithm , 2019, Appl. Soft Comput..

[4]  Nan Liu,et al.  Voting based extreme learning machine , 2012, Inf. Sci..

[5]  R. Rao Jaya: A simple and new optimization algorithm for solving constrained and unconstrained optimization problems , 2016 .

[6]  R. Deo,et al.  Very short‐term reactive forecasting of the solar ultraviolet index using an extreme learning machine integrated with the solar zenith angle , 2017, Environmental research.

[7]  Zaher Mundher Yaseen,et al.  Predicting compressive strength of lightweight foamed concrete using extreme learning machine model , 2018, Adv. Eng. Softw..

[8]  Sai Prasad Potharaju,et al.  Distributed feature selection (DFS) strategy for microarray gene expression data to improve the classification performance , 2018, Clinical Epidemiology and Global Health.

[9]  Santos Kumar Baliarsingh,et al.  Biclustering of Microarray Data Employing Multiobjective GA , 2017, 2017 14th IEEE India Council International Conference (INDICON).

[10]  R. Deo,et al.  Forecasting effective drought index using a wavelet extreme learning machine (W-ELM) model , 2017, Stochastic Environmental Research and Risk Assessment.

[11]  Enrique Alba,et al.  Two hybrid wrapper-filter feature selection algorithms applied to high-dimensional microarray experiments , 2016, Appl. Soft Comput..

[12]  Yanan Li,et al.  Haptic Identification by ELM-Controlled Uncertain Manipulator , 2017, IEEE Transactions on Systems, Man, and Cybernetics: Systems.

[13]  Yudong Zhang,et al.  Tea Category Identification Using a Novel Fractional Fourier Entropy and Jaya Algorithm , 2016, Entropy.

[14]  Hala Alshamlan,et al.  mRMR-ABC: A Hybrid Gene Selection Algorithm for Cancer Classification Using Microarray Gene Expression Profiling , 2015, BioMed research international.

[15]  Sam Kwong,et al.  EVOLVING EXTREME LEARNING MACHINE PARADIGM WITH ADAPTIVE OPERATOR SELECTION AND PARAMETER CONTROL , 2013 .

[16]  Nikolaos V. Sahinidis,et al.  Simulation optimization: a review of algorithms and applications , 2014, 4OR.

[17]  Bo Liu,et al.  Image classification based on effective extreme learning machine , 2013, Neurocomputing.

[18]  Emile H. L. Aarts,et al.  Performance of the simulated annealing algorithm , 1987 .

[19]  Paul Geladi,et al.  Principal Component Analysis , 1987, Comprehensive Chemometrics.

[20]  Bao-Liang Lu,et al.  Identifying Stable Patterns over Time for Emotion Recognition from EEG , 2016, IEEE Transactions on Affective Computing.

[21]  Jacek M. Zurada,et al.  Identification of Full and Partial Class Relevant Genes , 2010, IEEE/ACM Transactions on Computational Biology and Bioinformatics.

[22]  A. Kai Qin,et al.  Evolutionary extreme learning machine , 2005, Pattern Recognit..

[23]  Verónica Bolón-Canedo,et al.  Distributed feature selection: An application to microarray data classification , 2015, Appl. Soft Comput..

[24]  Jason Jianjun Gu,et al.  An Efficient Method for Traffic Sign Recognition Based on Extreme Learning Machine , 2017, IEEE Transactions on Cybernetics.

[25]  Sambit Bakshi,et al.  Analysis of high-dimensional biomedical data using an evolutionary multi-objective emperor penguin optimizer , 2019, Swarm Evol. Comput..

[26]  Norman Mariun,et al.  Optimal Power Flow Using the Jaya Algorithm , 2016 .

[27]  Kathryn A. Dowsland,et al.  Simulated Annealing , 1989, Encyclopedia of GIS.

[28]  Ghada Hany Badr,et al.  Genetic Bee Colony (GBC) algorithm: A new gene selection method for microarray cancer classification , 2015, Comput. Biol. Chem..

[29]  Yudong Zhang,et al.  Multiple Sclerosis Identification Based on Fractional Fourier Entropy and a Modified Jaya Algorithm , 2018, Entropy.