DNA Nanotechnology for Cancer Diagnosis and Therapy

Cancer is one of the leading causes of mortality worldwide, because of the lack of accurate diagnostic tools for the early stages of cancer. Thus, early diagnosis, which provides important information for a timely therapy of cancer, is of great significance for controlling the development of the disease and the proliferation of cancer cells and for improving the survival rates of patients. To achieve the goals of early diagnosis and timely therapy of cancer, DNA nanotechnology may be effective, since it has emerged as a valid technique for the fabrication of various nanoscale structures and devices. The resultant DNA-based nanoscale structures and devices show extraordinary performance in cancer diagnosis, owing to their predictable secondary structures, small sizes, and high biocompatibility and programmability. In particular, the rapid development of DNA nanotechnologies, such as molecular assembly technologies, endows DNA-based nanomaterials with more functionalization and intellectualization. Here, we summarize recent progress made in the development of DNA nanotechnology for the fabrication of functional and intelligent nanomaterials and highlight the prospects of this technology in cancer diagnosis and therapy.

[1]  Genxi Li,et al.  Ultrasensitive Quantitation of Plasma Membrane Proteins via isRTA. , 2017, Analytical chemistry.

[2]  Genxi Li,et al.  A netlike rolling circle nucleic acid amplification technique. , 2015, The Analyst.

[3]  Feng Xu,et al.  Facial Layer-by-Layer Engineering of Upconversion Nanoparticles for Gene Delivery: Near-Infrared-Initiated Fluorescence Resonance Energy Transfer Tracking and Overcoming Drug Resistance in Ovarian Cancer. , 2017, ACS applied materials & interfaces.

[4]  Victor Pan,et al.  The Beauty and Utility of DNA Origami , 2017 .

[5]  Cuichen Wu,et al.  Self-assembly of DNA Nanohydrogels with Controllable Size and Stimuli-Responsive Property for Targeted Gene Regulation Therapy , 2015, Journal of the American Chemical Society.

[6]  Genxi Li,et al.  Ultrafine and well dispersed silver nanocrystals on 2D nanosheets: synthesis and application as a multifunctional material for electrochemical catalysis and biosensing. , 2014, Nanoscale.

[7]  Nan Ma,et al.  DNA-Programmed Quantum Dot Polymerization for Ultrasensitive Molecular Imaging of Cancer Cells. , 2016, Analytical chemistry.

[8]  Fei Zhang,et al.  DNA Origami: Scaffolds for Creating Higher Order Structures. , 2017, Chemical reviews.

[9]  Yan Deng,et al.  Aptamer selection and applications for breast cancer diagnostics and therapy , 2017, Journal of Nanobiotechnology.

[10]  Zhao Zhang,et al.  DNA Origami Rotaxanes: Tailored Synthesis and Controlled Structure Switching. , 2016, Angewandte Chemie.

[11]  C. Li,et al.  Proximity ligation-induced assembly of DNAzymes for simple and cost-effective colourimetric detection of proteins with high sensitivity. , 2016, Chemical communications.

[12]  X Chris Le,et al.  A microRNA-initiated DNAzyme motor operating in living cells , 2017, Nature Communications.

[13]  A. Jemal,et al.  Cancer statistics, 2017 , 2017, CA: a cancer journal for clinicians.

[14]  B. Hong,et al.  Biomedical applications of graphene and graphene oxide. , 2013, Accounts of chemical research.

[15]  Genxi Li,et al.  Surface-immobilized and self-shaped DNA hydrogels and their application in biosensing† †Electronic supplementary information (ESI) available. See DOI: 10.1039/c7sc03716c , 2017, Chemical science.

[16]  Baoquan Ding,et al.  A DNA nanorobot functions as a cancer therapeutic in response to a molecular trigger in vivo , 2018, Nature Biotechnology.

[17]  David Pozo,et al.  Iron oxide nanoparticles as magnetic relaxation switching (MRSw) sensors: Current applications in nanomedicine. , 2016, Nanomedicine : nanotechnology, biology, and medicine.

[18]  Xiaoli Zhu,et al.  From Interface to Solution: Integrating Immunoassay with Netlike Rolling Circle Amplification for Ultrasensitive Detection of Tumor Biomarker , 2017, Theranostics.

[19]  Jie Chao,et al.  DNA Hydrogel with Aptamer-Toehold-Based Recognition, Cloaking, and Decloaking of Circulating Tumor Cells for Live Cell Analysis. , 2017, Nano letters.

[20]  Jinhwan Kim,et al.  Tumor-homing, size-tunable clustered nanoparticles for anticancer therapeutics. , 2014, ACS nano.

[21]  A. Jemal,et al.  Global Cancer Statistics , 2011 .

[22]  Xiaobing Zhang,et al.  A smart DNAzyme-MnO₂ nanosystem for efficient gene silencing. , 2015, Angewandte Chemie.

[23]  Shawn M. Douglas,et al.  A Logic-Gated Nanorobot for Targeted Transport of Molecular Payloads , 2012, Science.

[24]  Dongsheng Liu,et al.  DNA nanotechnology based on i-motif structures. , 2014, Accounts of chemical research.

[25]  Jinsong Ding,et al.  Fluorescent sensors using DNA-functionalized graphene oxide , 2014, Analytical and Bioanalytical Chemistry.

[26]  Daniel G. Anderson,et al.  Molecularly Self-Assembled Nucleic Acid Nanoparticles for Targeted In Vivo siRNA Delivery , 2012, Nature nanotechnology.

[27]  X. Le,et al.  Rolling circle amplification: a versatile tool for chemical biology, materials science and medicine. , 2014, Chemical Society reviews.

[28]  Genxi Li,et al.  The design of a mechanical wave-like DNA nanomachine for the fabrication of a programmable and multifunctional molecular device. , 2017, Chemical communications.

[29]  Ali Khademhosseini,et al.  Evolution and Clinical Translation of Drug Delivery Nanomaterials. , 2017, Nano today.

[30]  Tianshu Chen,et al.  A Dual-Enzyme-Assisted Three-Dimensional DNA Walking Machine Using T4 Polynucleotide Kinase as Activators and Application in Polynucleotide Kinase Assays. , 2018, Analytical chemistry.

[31]  Yifan Lv,et al.  Preparation and biomedical applications of programmable and multifunctional DNA nanoflowers , 2015, Nature Protocols.

[32]  A. Armani,et al.  Two-Photon Microscopy Analysis of Gold Nanoparticle Uptake in 3D Cell Spheroids , 2016, PloS one.

[33]  X Chris Le,et al.  DNA-mediated homogeneous binding assays for nucleic acids and proteins. , 2013, Chemical reviews.

[34]  Yonggang Ke,et al.  Visualization of the Cellular Uptake and Trafficking of DNA Origami Nanostructures in Cancer Cells. , 2018, Journal of the American Chemical Society.

[35]  Jiantao Yu,et al.  A common anchor facilitated GO-DNA nano-system for multiplex microRNA analysis in live cells. , 2018, Nanoscale.

[36]  Cuichen Wu,et al.  Building a multifunctional aptamer-based DNA nanoassembly for targeted cancer therapy. , 2013, Journal of the American Chemical Society.

[37]  Omid C Farokhzad,et al.  DNA Self-Assembly of Targeted Near-Infrared-Responsive Gold Nanoparticles for Cancer Thermo-Chemotherapy , 2012, Angewandte Chemie.

[38]  Genxi Li,et al.  Fabrication of nanozyme@DNA hydrogel and its application in biomedical analysis , 2017, Nano Research.

[39]  Nan Ma,et al.  Catalytic Molecular Imaging of MicroRNA in Living Cells by DNA-Programmed Nanoparticle Disassembly. , 2016, Angewandte Chemie.

[40]  Zhichuan J. Xu,et al.  Synthesis, Functionalization, and Biomedical Applications of Multifunctional Magnetic Nanoparticles , 2010, Advanced materials.

[41]  M. Dong,et al.  The Self-Assembled Behavior of DNA Bases on the Interface , 2014, International journal of molecular sciences.

[42]  Richard A. Muscat,et al.  DNA nanotechnology from the test tube to the cell. , 2015, Nature nanotechnology.

[43]  M. Zhang,et al.  A Telomerase-Specific Doxorubicin-Releasing Molecular Beacon for Cancer Theranostics. , 2016, Angewandte Chemie.

[44]  Xiaoli Zhu,et al.  Detection of microRNA: A Point-of-Care Testing Method Based on a pH-Responsive and Highly Efficient Isothermal Amplification. , 2017, Analytical chemistry.

[45]  Jiye Shi,et al.  Single-particle tracking and modulation of cell entry pathways of a tetrahedral DNA nanostructure in live cells. , 2014, Angewandte Chemie.

[46]  Yongmei Yin,et al.  Rolling circle amplification in electrochemical biosensor with biomedical applications , 2016 .

[47]  Itamar Willner,et al.  Stimuli-responsive DNA-functionalized nano-/microcontainers for switchable and controlled release. , 2015, Angewandte Chemie.

[48]  Mark Bathe,et al.  DNA Nanotechnology: A foundation for Programmable Nanoscale Materials , 2017 .

[49]  C. Mirkin,et al.  DNA-Mediated Cellular Delivery of Functional Enzymes. , 2015, Journal of the American Chemical Society.

[50]  Jinkee Hong,et al.  Controlled release of an anti-cancer drug from DNA structured nano-films , 2014, Scientific Reports.

[51]  Hongyuan Chen,et al.  Near Infrared-Guided Smart Nanocarriers for MicroRNA-Controlled Release of Doxorubicin/siRNA with Intracellular ATP as Fuel. , 2016, ACS nano.

[52]  Yamuna Krishnan,et al.  Designing DNA nanodevices for compatibility with the immune system of higher organisms. , 2015, Nature nanotechnology.

[53]  N. Dubrawsky Cancer statistics , 1989, CA: a cancer journal for clinicians.

[54]  Hongyuan Chen,et al.  Highly Sensitive Colorimetric Cancer Cell Detection Based on Dual Signal Amplification. , 2016, ACS applied materials & interfaces.

[55]  Genxi Li,et al.  A dual-colorimetric signal strategy for DNA detection based on graphene and DNAzyme , 2014 .

[56]  Genxi Li,et al.  Highly Sensitive Protein Detection Based on Smart Hybrid Nanocomposite-Controlled Switch of DNA Polymerase Activity. , 2016, ACS applied materials & interfaces.

[57]  Qiao Jiang,et al.  DNA origami as an in vivo drug delivery vehicle for cancer therapy. , 2014, ACS nano.

[58]  T. Hyeon,et al.  Surface design of magnetic nanoparticles for stimuli-responsive cancer imaging and therapy. , 2017, Biomaterials.

[59]  Veikko Linko,et al.  Evolution of Structural DNA Nanotechnology , 2018, Advanced materials.

[60]  Weihong Tan,et al.  Functional nucleic acid-based hydrogels for bioanalytical and biomedical applications. , 2016, Chemical Society reviews.

[61]  Zhan Wu,et al.  Electrostatic nucleic acid nanoassembly enables hybridization chain reaction in living cells for ultrasensitive mRNA imaging. , 2015, Journal of the American Chemical Society.

[62]  C. Li,et al.  In Vitro Analysis of DNA-Protein Interactions in Gene Transcription Using DNAzyme-Based Electrochemical Assay. , 2017, Analytical chemistry.

[63]  M. Ferrari Cancer nanotechnology: opportunities and challenges , 2005, Nature Reviews Cancer.

[64]  A. Nel,et al.  Nanotechnology Strategies To Advance Outcomes in Clinical Cancer Care. , 2017, ACS nano.

[65]  Genxi Li,et al.  Design of DNA nanostructure-based interfacial probes for the electrochemical detection of nucleic acids directly in whole blood , 2017, Chemical science.

[66]  W. Tan,et al.  A Smart, Photocontrollable Drug Release Nanosystem for Multifunctional Synergistic Cancer Therapy. , 2017, ACS applied materials & interfaces.

[67]  D. Astruc,et al.  Applications of vectorized gold nanoparticles to the diagnosis and therapy of cancer. , 2012, Chemical Society reviews.

[68]  J. Chao,et al.  Real-Time Imaging of Single-Molecule Enzyme Cascade Using a DNA Origami Raft. , 2017, Journal of the American Chemical Society.

[69]  Weihong Tan,et al.  Fluorescence Resonance Energy Transfer-Based DNA Tetrahedron Nanotweezer for Highly Reliable Detection of Tumor-Related mRNA in Living Cells. , 2017, ACS nano.

[70]  Sai Bi,et al.  Hybridization chain reaction: a versatile molecular tool for biosensing, bioimaging, and biomedicine. , 2017, Chemical Society reviews.

[71]  Hao Yan,et al.  Structural DNA Nanotechnology: State of the Art and Future Perspective , 2014, Journal of the American Chemical Society.

[72]  K. Ye,et al.  A RNA-DNA Hybrid Aptamer for Nanoparticle-Based Prostate Tumor Targeted Drug Delivery , 2016, International journal of molecular sciences.

[73]  G. Khan,et al.  Nanotechnology: from In Vivo Imaging System to Controlled Drug Delivery , 2017, Nanoscale Research Letters.

[74]  P. Rothemund Folding DNA to create nanoscale shapes and patterns , 2006, Nature.

[75]  Veikko Linko,et al.  DNA Nanostructures as Smart Drug-Delivery Vehicles and Molecular Devices. , 2015, Trends in biotechnology.

[76]  Genxi Li,et al.  Nondestructive Analysis of Tumor-Associated Membrane Protein Integrating Imaging and Amplified Detection in situ Based on Dual-Labeled DNAzyme , 2018, Theranostics.

[77]  Liguang Xu,et al.  Dual-Mode Ultrasensitive Quantification of MicroRNA in Living Cells by Chiroplasmonic Nanopyramids Self-Assembled from Gold and Upconversion Nanoparticles. , 2016, Journal of the American Chemical Society.

[78]  C. Fan,et al.  Isothermal Amplification of Nucleic Acids. , 2015, Chemical reviews.

[79]  S. Xiao,et al.  Small circular DNA molecules act as rigid motifs to build DNA nanotubes. , 2014, Journal of the American Chemical Society.