Trichogin GA IV Alignment and Oligomerization in Phospholipid Bilayers

Trichogin GA IV is a short peptaibol with antimicrobial activity. This uncharged, but amphipathic, sequence is aligned at the membrane interface and undergoes a transition to an aggregated state that inserts more deeply into the membrane, an assembly that predominates at a peptide‐to‐lipid ratio (P/L) of 1:20. In this work, the natural trichogin sequence was prepared and reconstituted into oriented lipid bilayers. The 15N NMR chemical shift is indicative of a well‐defined alignment of the peptide parallel to the membrane surface at P/Ls of 1:120 and 1:20. When the P/L is increased to 1:8, an additional peptide topology is observed that is indicative of a heterogeneous orientation, with helix alignments ranging from around the magic angle to perfectly in‐plane. The topological preference of the trichogin helix for an orientation parallel to the membrane surface was confirmed by attenuated total reflection FTIR spectroscopy. Furthermore, 19F CODEX experiments were performed on a trichogin sequence with 19F‐Phe at position 10. The CODEX decay is in agreement with a tetrameric complex, in which the 19F sites are about 9–9.5 Å apart. Thus, a model emerges in which the monomeric peptide aligns along the membrane surface. When the peptide concentration increases, first dimeric and then tetrameric assemblies form, made up from helices oriented predominantly parallel to the membrane surface. The formation of these aggregates correlates with the release of vesicle contents including relatively large molecules.

[1]  C. Toniolo,et al.  Peptide antibiotic trichogin in model membranes: Self-association and capture of fatty acids. , 2019, Biochimica et biophysica acta. Biomembranes.

[2]  C. Aisenbrey,et al.  Solid-State NMR Approaches to Study Protein Structure and Protein-Lipid Interactions. , 2019, Methods in molecular biology.

[3]  Jolene L. Lau,et al.  Therapeutic peptides: Historical perspectives, current development trends, and future directions. , 2017, Bioorganic & medicinal chemistry.

[4]  C. Aisenbrey,et al.  pH-Dependent Membrane Interactions of the Histidine-Rich Cell-Penetrating Peptide LAH4-L1. , 2017, Biophysical journal.

[5]  C. Toniolo,et al.  Insights into peptide‐membrane interactions of newly synthesized, nitroxide‐containing analogs of the peptaibiotic trichogin GA IV using EPR , 2017, Biopolymers.

[6]  C. Toniolo,et al.  Alamethicin Supramolecular Organization in Lipid Membranes from 19F Solid-State NMR. , 2016, Biophysical journal.

[7]  B. Biondi,et al.  The rational search for selective anticancer derivatives of the peptide Trichogin GA IV: a multi-technique biophysical approach , 2016, Scientific Reports.

[8]  C. Toniolo,et al.  The fluorescence and infrared absorption probe para‐cyanophenylalanine: Effect of labeling on the behavior of different membrane‐interacting peptides , 2015, Biopolymers.

[9]  B. Bechinger The SMART model: Soft Membranes Adapt and Respond, also Transiently, in the presence of antimicrobial peptides , 2015, Journal of peptide science : an official publication of the European Peptide Society.

[10]  C. Toniolo,et al.  4‐Cyano‐α‐methyl‐l‐phenylalanine as a Spectroscopic Marker for the Investigation of PeptaibioticMembrane Interactions , 2015, Chemistry & biodiversity.

[11]  E. Papini,et al.  The peculiar N- and (-termini of trichogin GA IV are needed for membrane interaction and human cell death induction at doses lacking antibiotic activity. , 2015, Biochimica et biophysica acta.

[12]  J. Lipkowski,et al.  Molecular resolution visualization of a pore formed by trichogin, an antimicrobial peptide, in a phospholipid matrix. , 2014, Biochimica et biophysica acta.

[13]  B. Wallace,et al.  Lipid interactions of LAH4, a peptide with antimicrobial and nucleic acid transfection activities , 2014, European Biophysics Journal.

[14]  C. Toniolo,et al.  Electrophysiology Investigation of Trichogin GA IV Activity in Planar Lipid Membranes Reveals Ion Channels of Well‐Defined Size , 2014, Chemistry & biodiversity.

[15]  B. Bechinger,et al.  15N chemical shift referencing in solid state NMR. , 2014, Solid state nuclear magnetic resonance.

[16]  K. Hahm,et al.  Interaction of hydrophobic and amphipathic antimicrobial peptides with lipid bicelles , 2014, Journal of peptide science : an official publication of the European Peptide Society.

[17]  C. Toniolo,et al.  Spectroscopically Labeled Peptaibiotics. Synthesis and Properties of Selected Trichogin GA IV Analogs Bearing a Side‐Chain‐Monofluorinated Aromatic Amino Acid for 19F‐NMR Analysis , 2013, Chemistry & biodiversity.

[18]  C. Toniolo,et al.  Towards a Myriad of Peptaibiotics , 2013, Chemistry & biodiversity.

[19]  S. Dzuba,et al.  Spin‐Echo Electron Paramagnetic Resonance (EPR) Spectroscopy of a Pore‐Forming (Lipo)Peptaibol in Model and Bacterial Membranes , 2013, Chemistry & biodiversity.

[20]  C. Toniolo,et al.  Membrane thickness and the mechanism of action of the short peptaibol trichogin GA IV. , 2013, Biochimica et biophysica acta.

[21]  Flavio Maran,et al.  Probing membrane permeabilization by the antibiotic lipopeptaibol trichogin GA IV in a tethered bilayer lipid membrane. , 2012, Biochimica et biophysica acta.

[22]  C. Toniolo,et al.  A molecular view on the role of cholesterol upon membrane insertion, aggregation, and water accessibility of the antibiotic lipopeptide trichogin GA IV as revealed by EPR. , 2012, The journal of physical chemistry. B.

[23]  K. Hahm,et al.  Antimicrobial lipopeptaibol trichogin GA IV: role of the three Aib residues on conformation and bioactivity , 2012, Amino Acids.

[24]  Andrew P. Boughton,et al.  Observing a model ion channel gating action in model cell membranes in real time in situ: membrane potential change induced alamethicin orientation change. , 2012, Journal of the American Chemical Society.

[25]  B. Bechinger,et al.  The membrane interactions of antimicrobial peptides revealed by solid-state NMR spectroscopy. , 2012, Chemistry and physics of lipids.

[26]  K. Hahm,et al.  Trichogin GA IV: a versatile template for the synthesis of novel peptaibiotics. , 2012, Organic & biomolecular chemistry.

[27]  M. Moncelli,et al.  A new approach to detect and study ion channel formation in microBLMs , 2011 .

[28]  B. Bechinger,et al.  Lipid-controlled peptide topology and interactions in bilayers: structural insights into the synergistic enhancement of the antimicrobial activities of PGLa and magainin 2. , 2011, Biophysical journal.

[29]  C. Toniolo,et al.  Small-amplitude backbone motions of the spin-labeled lipopeptide trichogin GA IV in a lipid membrane as revealed by electron spin echo. , 2010, The journal of physical chemistry. B.

[30]  C. Toniolo,et al.  Fluctuations and the rate-limiting step of peptide-induced membrane leakage. , 2010, Biophysical journal.

[31]  C. Aisenbrey,et al.  Solid-state NMR approaches to measure topological equilibria and dynamics of membrane polypeptides. , 2010, Biochimica et biophysica acta.

[32]  C. Aisenbrey,et al.  Membrane structure and conformational changes of the antibiotic heterodimeric peptide distinctin by solid-state NMR spectroscopy , 2009, Proceedings of the National Academy of Sciences.

[33]  K. Hahm,et al.  Trichogin GA IV: an antibacterial and protease‐resistant peptide , 2009, Journal of peptide science : an official publication of the European Peptide Society.

[34]  K. Hahm,et al.  Different mechanisms of action of antimicrobial peptides: insights from fluorescence spectroscopy experiments and molecular dynamics simulations , 2009, Journal of peptide science : an official publication of the European Peptide Society.

[35]  Chul Kim,et al.  Evidence of pores and thinned lipid bilayers induced in oriented lipid membranes interacting with the antimicrobial peptides, magainin-2 and aurein-3.3. , 2009, Biochimica et biophysica acta.

[36]  B. Bechinger,et al.  Membrane order perturbation in the presence of antimicrobial peptides by (2)H solid-state NMR spectroscopy. , 2009, Biochimie.

[37]  F. Almeida,et al.  Structure and membrane interactions of the antibiotic peptide dermadistinctin K by multidimensional solution and oriented 15N and 31P solid-state NMR spectroscopy. , 2009, Biophysical journal.

[38]  C. Toniolo,et al.  Alamethicin topology in phospholipid membranes by oriented solid-state NMR and EPR spectroscopies: a comparison. , 2009, The journal of physical chemistry. B.

[39]  S. Reissmann,et al.  Structure and alignment of the membrane-associated peptaibols ampullosporin A and alamethicin by oriented 15N and 31P solid-state NMR spectroscopy. , 2009, Biophysical journal.

[40]  C. Toniolo,et al.  Peptaibiotics : fungal peptides containing α-dialkyl α-amino acids , 2009 .

[41]  A. Drake,et al.  Membrane interaction of chrysophsin-1, a histidine-rich antimicrobial peptide from red sea bream. , 2007, Biochemistry.

[42]  N. Nielsen,et al.  Membrane-bound conformation of peptaibols with methyl-deuterated alpha-amino isobutyric acids by 2H magic angle spinning solid-state NMR spectroscopy. , 2007, Journal of the American Chemical Society.

[43]  Wenbin Luo,et al.  Side-chain conformation of the M2 transmembrane peptide proton channel of influenza a virus from 19F solid-state NMR. , 2007, The journal of physical chemistry. B.

[44]  C. Toniolo,et al.  Peptaibiotics , 2007 .

[45]  C. Toniolo,et al.  Multinuclear Solid‐State‐NMR and FT‐IR‐Absorption Investigations on Lipid/Trichogin Bilayers , 2007, Chemistry & biodiversity.

[46]  C. Vágvölgyi,et al.  The History of Alamethicin: A Review of the Most Extensively Studied Peptaibol , 2007, Chemistry & biodiversity.

[47]  C. Toniolo,et al.  Alamethicin Interaction with Lipid Membranes: A Spectroscopic Study on Synthetic Analogues , 2007, Chemistry & biodiversity.

[48]  G. Rispoli,et al.  A novel technique to study pore-forming peptides in a natural membrane , 2007, European Biophysics Journal.

[49]  C. Toniolo,et al.  Effect of peptide lipidation on membrane perturbing activity: a comparative study on two trichogin analogues. , 2006, The journal of physical chemistry. B.

[50]  R. Tampé,et al.  Structure and Dynamics of Membrane-associated ICP47, a Viral Inhibitor of the MHC I Antigen-processing Machinery* , 2006, Journal of Biological Chemistry.

[51]  Huey W. Huang Molecular mechanism of antimicrobial peptides: the origin of cooperativity. , 2006, Biochimica et biophysica acta.

[52]  C. Toniolo,et al.  Location and aggregation of the spin-labeled peptide trichogin GA IV in a phospholipid membrane as revealed by pulsed EPR. , 2006, Biophysical journal.

[53]  Wenbin Luo,et al.  Determination of the oligomeric number and intermolecular distances of membrane protein assemblies by anisotropic 1H-driven spin diffusion NMR spectroscopy. , 2006, Journal of the American Chemical Society.

[54]  John F. Nagle,et al.  Structure of Fully Hydrated Fluid Phase Lipid Bilayers with Monounsaturated Chains , 2006, The Journal of Membrane Biology.

[55]  B. Bechinger,et al.  Topological equilibria of ion channel peptides in oriented lipid bilayers revealed by 15N solid-state NMR spectroscopy. , 2005, Biochemistry.

[56]  Jeremy C. Smith,et al.  The α Helix Dipole: Screened Out? , 2005 .

[57]  C. Toniolo,et al.  Mechanism of membrane activity of the antibiotic trichogin GA IV: a two-state transition controlled by peptide concentration. , 2005, Biophysical journal.

[58]  R. Semelka,et al.  Concepts of magnetic resonance , 2005 .

[59]  C. Toniolo,et al.  Aggregation and water-membrane partition as major determinants of the activity of the antibiotic peptide trichogin GA IV. , 2004, Biophysical journal.

[60]  M. Sansom Alamethicin and related peptaibols — model ion channels , 2004, European Biophysics Journal.

[61]  C. Toniolo,et al.  Aggregation of Spin Labeled Trichogin GA IV Dimers: Distance Distribution between Spin Labels in Frozen Solutions by PELDOR Data , 2003 .

[62]  C. Toniolo,et al.  Trichogin: a paradigm for lipopeptaibols , 2003, Journal of peptide science : an official publication of the European Peptide Society.

[63]  C. Toniolo,et al.  Self‐assembling and membrane modifying properties of a lipopeptaibol studied by CW‐ESR and PELDOR spectroscopies , 2003, Journal of peptide science : an official publication of the European Peptide Society.

[64]  B. Bechinger,et al.  Alignment and structural analysis of membrane polypeptides by 15N and 31P solid‐state NMR spectroscopy , 2003 .

[65]  J. Raap,et al.  Ion transport across a phospholipid membrane mediated by the peptide trichogin GA IV. , 2002, Biochimica et biophysica acta.

[66]  K. Nakanishi,et al.  Measurement of interfluorine distances in solids. , 2001, Journal of magnetic resonance.

[67]  B. Bechinger,et al.  15N and 31P solid-state NMR investigations on the orientation of zervamicin II and alamethicin in phosphatidylcholine membranes. , 2001, Biochemistry.

[68]  R. Brasseur,et al.  The topology of lysine-containing amphipathic peptides in bilayers by circular dichroism, solid-state NMR, and molecular modeling. , 2000, Biophysical journal.

[69]  B. Fung,et al.  An improved broadband decoupling sequence for liquid crystals and solids. , 2000, Journal of magnetic resonance.

[70]  C. Toniolo,et al.  The antimicrobial peptide trichogin and its interaction with phospholipid membranes. , 1999, European journal of biochemistry.

[71]  E. deAzevedo,et al.  Centerband-Only Detection of Exchange: Efficient Analysis of Dynamics in Solids by NMR , 1999 .

[72]  E. Goormaghtigh,et al.  Attenuated total reflection infrared spectroscopy of proteins and lipids in biological membranes. , 1999, Biochimica et biophysica acta.

[73]  G. von Heijne,et al.  The aromatic residues Trp and Phe have different effects on the positioning of a transmembrane helix in the microsomal membrane. , 1999, Biochemistry.

[74]  E. Goormaghtigh,et al.  Membrane helix orientation from linear dichroism of infrared attenuated total reflection spectra. , 1999, Biophysical journal.

[75]  S. Tatulian,et al.  Infrared spectroscopy of proteins and peptides in lipid bilayers , 1997, Quarterly Reviews of Biophysics.

[76]  B. Bechinger,et al.  Structure and Functions of Channel-Forming Peptides: Magainins, Cecropins, Melittin and Alamethicin , 1997, The Journal of Membrane Biology.

[77]  S. Ludtke,et al.  Mechanism of alamethicin insertion into lipid bilayers. , 1996, Biophysical journal.

[78]  C. Toniolo,et al.  Effect of Nα-Acyl Chain Length on the Membrane-Modifying Properties of Synthetic Analogs of the Lipopeptaibol Trichogin GA IV , 1996 .

[79]  D. Cafiso,et al.  Membrane orientation of the N-terminal segment of alamethicin determined by solid-state 15N NMR. , 1995, Biophysical journal.

[80]  C. Toniolo,et al.  Structure determination of racemic trichogin A IV using centrosymmetric crystals , 1994, Nature Structural Biology.

[81]  D. Engelman,et al.  A dimerization motif for transmembrane α–helices , 1994, Nature Structural Biology.

[82]  D. Laver The barrel-stave model as applied to alamethicin and its analogs reevaluated. , 1994, Biophysical journal.

[83]  S. Rebuffat,et al.  Trichogin A IV, an 11-residue lipopeptaibol from Trichoderma longibrachiatum , 1992 .

[84]  S. Opella,et al.  Flat-coil probe for NMR spectroscopy of oriented membrane samples , 1991 .

[85]  M. Rance,et al.  Obtaining high-fidelity spin-12 powder spectra in anisotropic media: Phase-cycled Hahn echo spectroscopy , 1983 .

[86]  Alexander Pines,et al.  Proton‐enhanced NMR of dilute spins in solids , 1973 .