A Sequel to Sanger: amplicon sequencing that scales
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Sujeevan Ratnasingham | Suresh Naik | Daniel H. Janzen | Jeremy R. deWaard | Jayme E. Sones | Sean W. J. Prosser | Thomas W. A. Braukmann | Evgeny V. Zakharov | D. Janzen | N. Ivanova | P. Hebert | S. Ratnasingham | W. Hallwachs | S. Prosser | E. Zakharov | Winnie Hallwachs | Paul D. N. Hebert | J. Sones | Natalia V. Ivanova | S. Naik
[1] Vladimir Potapov,et al. Examining Sources of Error in PCR by Single-Molecule Sequencing , 2017, PloS one.
[2] Suzanna C. Francis,et al. Evaluation of PacBio sequencing for full-length bacterial 16S rRNA gene classification , 2016, BMC Microbiology.
[3] Jefferey Chen,et al. Sanger Confirmation Is Required to Achieve Optimal Sensitivity and Specificity in Next-Generation Sequencing Panel Testing. , 2016, The Journal of molecular diagnostics : JMD.
[4] Mehrdad Hajibabaei,et al. From writing to reading the encyclopedia of life , 2016, Philosophical Transactions of the Royal Society B: Biological Sciences.
[5] Sujeevan Ratnasingham,et al. Counting animal species with DNA barcodes: Canadian insects , 2016, Philosophical Transactions of the Royal Society B: Biological Sciences.
[6] Astrid Cruaud,et al. High-throughput sequencing of multiple amplicons for barcoding and integrative taxonomy , 2016, Scientific Reports.
[7] E. Eichler,et al. Long-read sequencing and de novo assembly of a Chinese genome , 2016, Nature Communications.
[8] V. Marx. PCR: the price of infidelity , 2016, Nature Methods.
[9] James G. Baldwin-Brown,et al. Contiguous and accurate de novo assembly of metazoan genomes with modest long read coverage , 2016, bioRxiv.
[10] David S. Wishart,et al. Heatmapper: web-enabled heat mapping for all , 2016, Nucleic Acids Res..
[11] J. Loparo,et al. Mapping DNA polymerase errors by single-molecule sequencing , 2016, Nucleic acids research.
[12] J. Mullikin,et al. Systematic Evaluation of Sanger Validation of Next-Generation Sequencing Variants. , 2016, Clinical chemistry.
[13] Patrick D. Schloss,et al. Sequencing 16S rRNA gene fragments using the PacBio SMRT DNA sequencing system , 2016, PeerJ.
[14] R. Sebra,et al. Long‐Read Single Molecule Real‐Time Full Gene Sequencing of Cytochrome P450‐2D6 , 2016, Human mutation.
[15] B. Chain,et al. The sequence of sequencers: The history of sequencing DNA , 2016, Genomics.
[16] Kristine Bohmann,et al. Tag jumps illuminated – reducing sequence‐to‐sample misidentifications in metabarcoding studies , 2015, Molecular ecology resources.
[17] Kin-Fan Au,et al. PacBio Sequencing and Its Applications , 2015, Genom. Proteom. Bioinform..
[18] Tyler A. Elliott,et al. What's in a genome? The C-value enigma and the evolution of eukaryotic genome content , 2015, Philosophical Transactions of the Royal Society B: Biological Sciences.
[19] Rebecca S. Just,et al. Mitochondrial DNA heteroplasmy in the emerging field of massively parallel sequencing , 2015, Forensic science international. Genetics.
[20] Lyubomir Penev,et al. Biodiversity inventories in high gear: DNA barcoding facilitates a rapid biotic survey of a temperate nature reserve , 2015, Biodiversity data journal.
[21] Eric W. Klee,et al. Confirming Variants in Next-Generation Sequencing Panel Testing by Sanger Sequencing. , 2015, The Journal of molecular diagnostics : JMD.
[22] Mehrdad Hajibabaei,et al. Massively parallel multiplex DNA sequencing for specimen identification using an Illumina MiSeq platform , 2015, Scientific Reports.
[23] H. Timmers,et al. Regulation of anti-sense transcription by Mot1p and NC2 via removal of TATA-binding protein (TBP) from the 3′-end of genes , 2014, Nucleic acids research.
[24] Anthony M. Zador,et al. Sources of PCR-induced distortions in high-throughput sequencing data sets , 2014, bioRxiv.
[25] P. Hebert,et al. Recovery of DNA barcodes from blackfly museum specimens (Diptera: Simuliidae) using primer sets that target a variety of sequence lengths , 2014, Molecular ecology resources.
[26] Mehrdad Hajibabaei,et al. Next-generation DNA barcoding: using next-generation sequencing to enhance and accelerate DNA barcode capture from single specimens , 2014, Molecular ecology resources.
[27] Roy D. Sleator,et al. 'Big data', Hadoop and cloud computing in genomics , 2013, J. Biomed. Informatics.
[28] A. Hoffmann,et al. Environmental monitoring using next generation sequencing: rapid identification of macroinvertebrate bioindicator species , 2013, Frontiers in Zoology.
[29] Beth Mantle,et al. A DNA ‘Barcode Blitz’: Rapid Digitization and Sequencing of a Natural History Collection , 2013, PloS one.
[30] Sujeevan Ratnasingham,et al. A DNA-Based Registry for All Animal Species: The Barcode Index Number (BIN) System , 2013, PloS one.
[31] N. Lennon,et al. Characterizing and measuring bias in sequence data , 2013, Genome Biology.
[32] B. Haas,et al. Premetazoan genome evolution and the regulation of cell differentiation in the choanoflagellate Salpingoeca rosetta , 2013, Genome Biology.
[33] Hong Ma,et al. Highly conserved low-copy nuclear genes as effective markers for phylogenetic analyses in angiosperms. , 2012, The New phytologist.
[34] H. Swerdlow,et al. A tale of three next generation sequencing platforms: comparison of Ion Torrent, Pacific Biosciences and Illumina MiSeq sequencers , 2012, BMC Genomics.
[35] D. Reich,et al. Cost-effective, high-throughput DNA sequencing libraries for multiplexed target capture , 2012, Genome research.
[36] Marcel Martin. Cutadapt removes adapter sequences from high-throughput sequencing reads , 2011 .
[37] Elaine R. Mardis,et al. A decade’s perspective on DNA sequencing technology , 2011, Nature.
[38] A. Bolshoy,et al. statistical analysis of exon lengths in various eukaryotes , 2011 .
[39] P. Hebert,et al. Coupling non‐destructive DNA extraction and voucher retrieval for small soft‐bodied Arthropods in a high‐throughput context: the example of Collembola , 2010, Molecular ecology resources.
[40] S. Turner,et al. A flexible and efficient template format for circular consensus sequencing and SNP detection , 2010, Nucleic acids research.
[41] S. Koren,et al. Assembly algorithms for next-generation sequencing data. , 2010, Genomics.
[42] B. Karger,et al. DNA sequencing by CE , 2009, Electrophoresis.
[43] K. Crandall,et al. Many species in one: DNA barcoding overestimates the number of species when nuclear mitochondrial pseudogenes are coamplified , 2008, Proceedings of the National Academy of Sciences.
[44] R. Knight,et al. Error-correcting barcoded primers for pyrosequencing hundreds of samples in multiplex , 2008, Nature Methods.
[45] G. Grard,et al. Long PCR Product Sequencing (LoPPS): a shotgun-based approach to sequence long PCR products , 2007, Nature Protocols.
[46] Jeremy R. deWaard,et al. An inexpensive, automation-friendly protocol for recovering high-quality DNA , 2006 .
[47] Jan Kieleczawa,et al. Fundamentals of sequencing of difficult templates--an overview. , 2006, Journal of biomolecular techniques : JBT.
[48] M. Ronaghi,et al. DNA Sequencing: Optimizing Process and Analysis , 2005 .
[49] J. Kieleczawa. DNA Sequencing: Optimizing the Process and Analysis , 2004 .
[50] Dario Leister,et al. NUMTs in sequenced eukaryotic genomes. , 2004, Molecular biology and evolution.
[51] J. Moulton,et al. Evolution and phylogenetic utility of CAD (rudimentary) among Mesozoic-aged Eremoneuran Diptera (Insecta). , 2004, Molecular phylogenetics and evolution.
[52] G. Glöckner. Large Scale Sequencing and Analysis of AT Rich Eukaryote Genomes , 2000 .
[53] J E Sulston,et al. Short-insert libraries as a method of problem solving in genome sequencing. , 1998, Genome research.
[54] T. Kunkel,et al. DNA polymerase fidelity and the polymerase chain reaction. , 1991, PCR methods and applications.
[55] M. Nelen,et al. Translating sanger-based routine DNA diagnostics into generic massive parallel ion semiconductor sequencing. , 2015, Clinical chemistry.
[56] S. Turner,et al. Real-time DNA sequencing from single polymerase molecules. , 2010, Methods in enzymology.
[57] P. Hebert,et al. bold: The Barcode of Life Data System (http://www.barcodinglife.org) , 2007, Molecular ecology notes.
[58] N. Dovichi. DNA sequencing by capillary electrophoresis , 1997, Electrophoresis.
[59] Christus,et al. A General Method Applicable to the Search for Similarities in the Amino Acid Sequence of Two Proteins , 2022 .