Identification and characterisation of Dof transcription factors in the cucumber genome

[1]  James C. Schnable,et al.  SynFind: Compiling Syntenic Regions across Any Set of Genomes on Demand , 2015, Genome biology and evolution.

[2]  Yong Xu,et al.  Fine genetic mapping of target leaf spot resistance gene cca-3 in cucumber, Cucumis sativus L. , 2015, Theoretical and Applied Genetics.

[3]  Yong Xu,et al.  Fine genetic mapping of target leaf spot resistance gene cca-3 in cucumber, Cucumis sativus L. , 2015, Theoretical and Applied Genetics.

[4]  S. W. Park,et al.  Genome-wide analysis and expression profiling of DNA-binding with one zinc finger (Dof) transcription factor family in potato. , 2015, Plant physiology and biochemistry : PPB.

[5]  Zhonghua Zhang,et al.  A Sequencing-Based Linkage Map of Cucumber. , 2015, Molecular plant.

[6]  Hyeran Kim,et al.  Mapping QTLs of resistance to head splitting in cabbage (Brassica oleracea L.var. capitata L.) , 2015, Molecular Breeding.

[7]  Hongquan Yang,et al.  The CNT1 Domain of Arabidopsis CRY1 Alone Is Sufficient to Mediate Blue Light Inhibition of Hypocotyl Elongation. , 2015, Molecular plant.

[8]  B. Sarangi,et al.  Genome wide in silico characterization of Dof gene families of pigeonpea (Cajanus cajan (L) Millsp.) , 2015, Molecular Biology Reports.

[9]  A. Xiong,et al.  Genome-wide analysis of Dof family transcription factors and their responses to abiotic stresses in Chinese cabbage , 2015, BMC Genomics.

[10]  Qian Wang,et al.  Transcriptomic analysis reveals the roles of microtubule-related genes and transcription factors in fruit length regulation in cucumber (Cucumis sativus L.) , 2015, Scientific Reports.

[11]  Tao Jiang,et al.  Accurate inference of isoforms from multiple sample RNA-Seq data , 2015, BMC Genomics.

[12]  R. Cai,et al.  Identification and fine mapping of pm5.1: a recessive gene for powdery mildew resistance in cucumber (Cucumis sativus L.) , 2015, Molecular Breeding.

[13]  Yuming Sun,et al.  Water balance altered in cucumber plants infected with Fusarium oxysporum f. sp. cucumerinum , 2015, Scientific Reports.

[14]  V. Singh,et al.  Insights into structural and functional diversity of Dof (DNA binding with one finger) transcription factor , 2015, Planta.

[15]  X. Gu,et al.  A major quantitative trait locus conferring resistance to fusarium wilt was detected in cucumber by using recombinant inbred lines , 2014, Molecular Breeding.

[16]  M. Baloğlu,et al.  Genome-Wide Analysis of the bZIP Transcription Factors in Cucumber , 2014, PloS one.

[17]  J. Medina,et al.  Characterization of tomato Cycling Dof Factors reveals conserved and new functions in the control of flowering time and abiotic stress responses. , 2014, Journal of experimental botany.

[18]  Koichiro Tamura,et al.  MEGA6: Molecular Evolutionary Genetics Analysis version 6.0. , 2013, Molecular biology and evolution.

[19]  Ying Li,et al.  A genomic variation map provides insights into the genetic basis of cucumber domestication and diversity , 2013, Nature Genetics.

[20]  Yong Guo,et al.  Genome-Wide Analysis of the Dof Transcription Factor Gene Family Reveals Soybean-Specific Duplicable and Functional Characteristics , 2013, PloS one.

[21]  J. Svoboda,et al.  High-resolution mapping of zym, a recessive gene for Zucchini yellow mosaic virus resistance in cucumber , 2013, Theoretical and Applied Genetics.

[22]  Richard D. Thompson,et al.  The role of the DNA-binding One Zinc Finger (DOF) transcription factor family in plants. , 2013, Plant science : an international journal of experimental plant biology.

[23]  Z. Ye,et al.  Genome-wide analysis of plant-specific Dof transcription factor family in tomato. , 2013, Journal of integrative plant biology.

[24]  X. Gu,et al.  Chromosomal Mapping and QTL Analysis of Resistance to Downy Mildew in Cucumis sativus. , 2013, Plant disease.

[25]  M. Chye,et al.  The gene encoding Arabidopsis acyl-CoA-binding protein 3 is pathogen inducible and subject to circadian regulation , 2012, Journal of experimental botany.

[26]  Kui Lin,et al.  RNA-Seq improves annotation of protein-coding genes in the cucumber genome , 2011, BMC Genomics.

[27]  Zhonghua Zhang,et al.  Fine genetic mapping localizes cucumber scab resistance gene Ccu into an R gene cluster , 2011, Theoretical and Applied Genetics.

[28]  Asan,et al.  The genome of the cucumber, Cucumis sativus L. , 2009, Nature Genetics.

[29]  Yong Guo,et al.  Dof5.6/HCA2, a Dof Transcription Factor Gene, Regulates Interfascicular Cambium Formation and Vascular Tissue Development in Arabidopsis[W][OA] , 2009, The Plant Cell Online.

[30]  Steven J. M. Jones,et al.  Circos: an information aesthetic for comparative genomics. , 2009, Genome research.

[31]  Pablo Librado,et al.  DnaSP v5: a software for comprehensive analysis of DNA polymorphism data , 2009, Bioinform..

[32]  M. Zanor,et al.  The DOF transcription factor OBP1 is involved in cell cycle regulation in Arabidopsis thaliana. , 2008, The Plant journal : for cell and molecular biology.

[33]  Mineko Konishi,et al.  Sequential activation of two Dof transcription factor gene promoters during vascular development in Arabidopsis thaliana. , 2007, Plant physiology and biochemistry : PPB.

[34]  M. Zanor,et al.  Transcription factor AtDOF4;2 affects phenylpropanoid metabolism in Arabidopsis thaliana. , 2007, The New phytologist.

[35]  An-Yuan Guo,et al.  [GSDS: a gene structure display server]. , 2007, Yi chuan = Hereditas.

[36]  Miroslav Strnad,et al.  DOF transcription factor AtDof1.1 (OBP2) is part of a regulatory network controlling glucosinolate biosynthesis in Arabidopsis. , 2006, The Plant journal : for cell and molecular biology.

[37]  S. Kay,et al.  FKF1 F-Box Protein Mediates Cyclic Degradation of a Repressor of CONSTANS in Arabidopsis , 2005, Science.

[38]  Yuanji Zhang,et al.  miRU: an automated plant miRNA target prediction server , 2005, Nucleic Acids Res..

[39]  I. Rubio-Somoza,et al.  The barley cystatin gene (Icy) is regulated by DOF transcription factors in aleurone cells upon germination. , 2005, Journal of experimental botany.

[40]  Guillaume Blanc,et al.  Widespread Paleopolyploidy in Model Plant Species Inferred from Age Distributions of Duplicate Genes , 2004, The Plant Cell Online.

[41]  S. Yanagisawa Dof domain proteins: plant-specific transcription factors associated with diverse phenomena unique to plants. , 2004, Plant & cell physiology.

[42]  K. Washio Functional Dissections between GAMYB and Dof Transcription Factors Suggest a Role for Protein-Protein Associations in the Gibberellin-Mediated Expression of the RAmy1A Gene in the Rice Aleurone , 2003, Plant Physiology.

[43]  Jesús Vicente-Carbajosa,et al.  Genome-wide comparative phylogenetic analysis of the rice and Arabidopsis Dof gene families , 2003, BMC Evolutionary Biology.

[44]  S. Yanagisawa The Dof family of plant transcription factors. , 2002, Trends in plant science.

[45]  C. Camilleri,et al.  Mutations in the Dof Zinc Finger Genes DAG2 and DAG1 Influence with Opposite Effects the Germination of Arabidopsis Seeds Article, publication date, and citation information can be found at www.plantcell.org/cgi/doi/10.1105/tpc.010491. , 2002, The Plant Cell Online.

[46]  R. M. Goodman,et al.  Cloning and identification of the promoter of the tobacco Sar8.2b gene, a gene involved in systemic acquired resistance. , 2002, Gene.

[47]  T. Ehrhardt,et al.  Involvement of TAAAG elements suggests a role for Dof transcription factors in guard cell-specific gene expression. , 2002, The Plant journal : for cell and molecular biology.

[48]  S. Yanagisawa Dof1 and Dof2 transcription factors are associated with expression of multiple genes involved in carbon metabolism in maize. , 2000, The Plant journal : for cell and molecular biology.

[49]  C. Camilleri,et al.  Identification and disruption of an Arabidopsis zinc finger gene controlling seed germination. , 2000, Genes & development.

[50]  R D Appel,et al.  Protein identification and analysis tools in the ExPASy server. , 1999, Methods in molecular biology.