Human Endogenous Retrovirus-K and TDP-43 Expression Bridges ALS and HIV Neuropathology

Despite the repetitive association of endogenous retroviruses in human disease, the mechanisms behind their pathological contributions remain to be resolved. Here we discuss how neuronal human endogenous retrovirus-K (HERV-K) expression in human immunodeficiency virus (HIV)-infected individuals is a distinct pathological aspect of HIV-associated neurological conditions, such as HIV encephalitis and HIV-associated neurocognitive disorders. Enhanced neuronal HERV-K levels were observed in the majority of HIV-infected individuals, and to a higher degree in brain tissue marked by HIV replication. Moreover, we highlight an important neuropathological overlap between amyotrophic lateral sclerosis and HIV encephalitis, that being the formation of neurotoxic TDP-43 deposits in neurons. Herein, we argue for enhanced transdisciplinary research in the field of ERV biology, using an example of how HERV-K expression has novel mechanistic and therapeutic implications for HIV neuropathology.

[1]  J. Coffin,et al.  Identification, characterization, and comparative genomic distribution of the HERV-K (HML-2) group of human endogenous retroviruses , 2011, Retrovirology.

[2]  M. Schindler,et al.  HIV-1 Replication in Human Immune Cells Is Independent of TAR DNA Binding Protein 43 (TDP-43) Expression , 2014, PloS one.

[3]  W. Fawzi,et al.  The Timing of Mother-to-Child Transmission of Human Immunodeficiency Virus Infection and the Neurodevelopment of Children in Tanzania , 2006, The Pediatric infectious disease journal.

[4]  K. Nagashima,et al.  Molecular mechanisms by which HERV-K Gag interferes with HIV-1 Gag assembly and particle infectivity , 2017, Retrovirology.

[5]  V. Moulton,et al.  Activation of the innate immune response and interferon signalling in myotonic dystrophy type 1 and type 2 cataracts. , 2012, Human molecular genetics.

[6]  Rafael Contreras-Galindo,et al.  Comparative longitudinal studies of HERV-K and HIV-1 RNA titers in HIV-1-infected patients receiving successful versus unsuccessful highly active antiretroviral therapy. , 2007, AIDS research and human retroviruses.

[7]  J. Rothstein,et al.  Identification of active loci of a human endogenous retrovirus in neurons of patients with amyotrophic lateral sclerosis , 2011, Annals of neurology.

[8]  T. Heidmann,et al.  Trex1 Prevents Cell-Intrinsic Initiation of Autoimmunity , 2008, Cell.

[9]  R. Douville,et al.  Endogenous retrovirus-K promoter: a landing strip for inflammatory transcription factors? , 2013, Retrovirology.

[10]  Jerome H. Kim,et al.  Neuropsychological Impairment in Acute HIV and the Effect of Immediate Antiretroviral Therapy , 2015, Journal of acquired immune deficiency syndromes.

[11]  Justin C McArthur,et al.  The prevalence and incidence of neurocognitive impairment in the HAART era , 2007, AIDS.

[12]  J. Jelsma,et al.  The prevalence of motor delay among HIV infected children living in Cape Town, South Africa. , 2009, International journal of rehabilitation research. Internationale Zeitschrift fur Rehabilitationsforschung. Revue internationale de recherches de readaptation.

[13]  O. Brady,et al.  Regulation of TDP‐43 aggregation by phosphorylation andp62/SQSTM1 , 2011, Journal of neurochemistry.

[14]  J. McArthur,et al.  Human immunodeficiency virus‐associated neurocognitive disorders: Mind the gap , 2010, Annals of neurology.

[15]  J. Blomberg,et al.  Evolution of human endogenous retroviral sequences: a conceptual account. , 2008, Cellular and molecular life sciences : CMLS.

[16]  B. Miller,et al.  Cognitive and behavioral challenges in caring for patients with frontotemporal dementia and amyotrophic lateral sclerosis , 2010, Amyotrophic lateral sclerosis : official publication of the World Federation of Neurology Research Group on Motor Neuron Diseases.

[17]  R. Falk,et al.  TRIM28 Controls a Gene Regulatory Network Based on Endogenous Retroviruses in Human Neural Progenitor Cells. , 2017, Cell reports.

[18]  B. Miller,et al.  Are amyotrophic lateral sclerosis patients cognitively normal? , 2003, Neurology.

[19]  A. Sharpe,et al.  Differential Glycosylation of the Cas-Br-E Env Protein Is Associated with Retrovirus-Induced Spongiform Neurodegeneration , 2000, Journal of Virology.

[20]  R. Douville,et al.  TDP-43 regulates endogenous retrovirus-K viral protein accumulation , 2016, Neurobiology of Disease.

[21]  L. Larocque,et al.  The replicative activity of human endogenous retrovirus K102 (HERV-K102) with HIV viremia , 2007, AIDS.

[22]  David J. Volsky,et al.  HIV-associated neurocognitive disorder — pathogenesis and prospects for treatment , 2016, Nature Reviews Neurology.

[23]  E. Buratti,et al.  Physiological functions and pathobiology of TDP‐43 and FUS/TLS proteins , 2016, Journal of neurochemistry.

[24]  D. Mager,et al.  Mammalian Endogenous Retroviruses. , 2015, Microbiology spectrum.

[25]  Rafael Contreras-Galindo,et al.  HIV-1 infection increases the expression of human endogenous retroviruses type K (HERV-K) in vitro. , 2007, AIDS research and human retroviruses.

[26]  P. Majumder,et al.  Metabolism and mis-metabolism of the neuropathological signature protein TDP-43 , 2014, Journal of Cell Science.

[27]  Murray Grossman,et al.  Frontotemporal lobar degeneration: defining phenotypic diversity through personalized medicine , 2015, Acta Neuropathologica.

[28]  L. Quintanilla‐Martinez,et al.  Nucleic acid-sensing Toll-like receptors are essential for the control of endogenous retrovirus viremia and ERV-induced tumors. , 2012, Immunity.

[29]  Rafael Contreras-Galindo,et al.  Short Communication: Comparative Longitudinal Studies of HERV-K and HIV-1 RNA Titers in HIV-1-Infected Patients Receiving Successful versus Unsuccessful Highly Active Antiretroviral Therapy , 2007 .

[30]  Ashley R. Jones,et al.  Identification of miRNAs as Potential Biomarkers in Cerebrospinal Fluid from Amyotrophic Lateral Sclerosis Patients , 2016, NeuroMolecular Medicine.

[31]  M. Newell,et al.  Neurodevelopment in Children Born to HIV-Infected Mothers by Infection and Treatment Status , 2012, Pediatrics.

[32]  J. Trojanowski,et al.  Pathological TDP‐43 distinguishes sporadic amyotrophic lateral sclerosis from amyotrophic lateral sclerosis with SOD1 mutations , 2007, Annals of neurology.

[33]  Aurel Popa-Wagner,et al.  HIV-associated neurocognitive disorders , 2014, Journal of molecular psychiatry.

[34]  Mark T. W. Ebbert,et al.  Repetitive element transcripts are elevated in the brain of C9orf72 ALS/FTLD patients , 2017, Human molecular genetics.

[35]  Allan R. Brasier,et al.  Nuclear Heat Shock Response and Novel Nuclear Domain 10 Reorganization in Respiratory Syncytial Virus-Infected A549 Cells Identified by High-Resolution Two-Dimensional Gel Electrophoresis , 2004, Journal of Virology.

[36]  G. Omenn,et al.  Regulation of the Human Endogenous Retrovirus K (HML-2) Transcriptome by the HIV-1 Tat Protein , 2014, Journal of Virology.

[37]  Terry L. Jernigan,et al.  HIV-associated neurocognitive disorders before and during the era of combination antiretroviral therapy: differences in rates, nature, and predictors , 2010, Journal of NeuroVirology.

[38]  Howard Y. Chang,et al.  Intrinsic retroviral reactivation in human preimplantation embryos and pluripotent cells , 2015, Nature.

[39]  D Harrich,et al.  Cloning and characterization of a novel cellular protein, TDP-43, that binds to human immunodeficiency virus type 1 TAR DNA sequence motifs , 1995, Journal of virology.

[40]  T. Mak,et al.  Protection against Murine Leukemia Virus-InducedSpongiform Myeloencephalopathy in Mice Overexpressing Bcl-2 butNot in Mice Deficient for Interleukin-6, Inducible NitricOxide Synthetase, ICE, Fas, Fas Ligand, or TNF-R1Genes , 2003, Journal of Virology.

[41]  B. Wheatley,et al.  Human Endogenous Retrovirus-K(II) Envelope Induction Protects Neurons during HIV/AIDS , 2014, PloS one.

[42]  Caroline Gilbert,et al.  Syncytin proteins incorporated in placenta exosomes are important for cell uptake and show variation in abundance in serum exosomes from patients with preeclampsia , 2014, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.

[43]  C. Shaw,et al.  Erratum to: TDP-43 Proteinopathy and ALS: Insights into Disease Mechanisms and Therapeutic Targets , 2015, Neurotherapeutics.

[44]  G. Lachenal,et al.  Exosomes are released by cultured cortical neurones , 2006, Molecular and Cellular Neuroscience.

[45]  T. Christensen,et al.  Human endogenous retroviruses in neurologic disease , 2016, APMIS : acta pathologica, microbiologica, et immunologica Scandinavica.

[46]  Jeffrey N. Martin,et al.  Anti-HERV-K (HML-2) capsid antibody responses in HIV elite controllers , 2017, Retrovirology.

[47]  E. Buratti,et al.  Multiple roles of TDP-43 in gene expression, splicing regulation, and human disease. , 2008, Frontiers in bioscience : a journal and virtual library.

[48]  C. Dobson,et al.  The relevance of contact-independent cell-to-cell transfer of TDP-43 and SOD1 in amyotrophic lateral sclerosis , 2017, Biochimica et biophysica acta. Molecular basis of disease.

[49]  J. Ferguson,et al.  Endogenous Retrovirus-K and Nervous System Diseases , 2014, Current Neurology and Neuroscience Reports.

[50]  E. Rogaeva,et al.  Low molecular weight species of TDP-43 generated by abnormal splicing form inclusions in amyotrophic lateral sclerosis and result in motor neuron death , 2015, Acta Neuropathologica.

[51]  Inhibition of human endogenous retrovirus-K by antiretroviral drugs , 2017, Retrovirology.

[52]  M. Swanson,et al.  Expression of Human Endogenous Retrovirus Type K (HML-2) Is Activated by the Tat Protein of HIV-1 , 2012, Journal of Virology.

[53]  C. Feschotte,et al.  Regulatory evolution of innate immunity through co-option of endogenous retroviruses , 2016, Science.

[54]  S. Read,et al.  Cognitive and motor development in children with vertically transmitted HIV infection , 2001, Brain and Cognition.

[55]  T. Wurdinger,et al.  Extracellular Vesicles and Their Convergence with Viral Pathways , 2012, Advances in virology.

[56]  Dragan Maric,et al.  Human endogenous retrovirus-K contributes to motor neuron disease , 2015, Science Translational Medicine.

[57]  M. Boivin,et al.  A preliminary evaluation of the cognitive and motor effects of pediatric HIV infection in Zairian children. , 1995, Health psychology : official journal of the Division of Health Psychology, American Psychological Association.

[58]  Stephanie D. Kraft-Terry,et al.  HIV-1 neuroimmunity in the era of antiretroviral therapy , 2010, Neurobiology of Disease.

[59]  Bryan R. Smith,et al.  HIV-associated motor neuron disease , 2016, Neurology.

[60]  R. Lin,et al.  NF-κB and IRF1 Induce Endogenous Retrovirus K Expression via Interferon-Stimulated Response Elements in Its 5′ Long Terminal Repeat , 2016, Journal of Virology.

[61]  Rafael Contreras-Galindo,et al.  A new Real-Time-RT-PCR for quantitation of human endogenous retroviruses type K (HERV-K) RNA load in plasma samples: increased HERV-K RNA titers in HIV-1 patients with HAART non-suppressive regimens. , 2006, Journal of virological methods.

[62]  S. Akiba,et al.  HTLV-I-associated myelopathy (HAM)/tropical spastic paraparesis (TSP) with amyotrophic lateral sclerosis-like manifestations. , 2000, Journal of neurovirology.

[63]  V. Simon,et al.  Expression of HERV-K108 envelope interferes with HIV-1 production. , 2017, Virology.

[64]  F. Shewmaker,et al.  Stress granules at the intersection of autophagy and ALS , 2016, Brain Research.

[65]  R. Falk,et al.  TRIM 28 Controls a Gene Regulatory Network Based on Endogenous Retroviruses in Human Neural Progenitor Cells , 2016 .

[66]  G. Rosati,et al.  In vitro modulation of the multiple sclerosis (MS)-associated retrovirus by cytokines: Implications for MS pathogenesis , 2003, Journal of NeuroVirology.

[67]  M. Kornhuber,et al.  Cooccurrences of Putative Endogenous Retrovirus-Associated Diseases , 2017, BioMed research international.

[68]  C. Kozak,et al.  Endogenous Retroviruses and Cancer , 2010 .

[69]  D. Cleveland,et al.  Converging Mechanisms in ALS and FTD: Disrupted RNA and Protein Homeostasis , 2013, Neuron.

[70]  S. Akbarian,et al.  The C-Terminal TDP-43 Fragments Have a High Aggregation Propensity and Harm Neurons by a Dominant-Negative Mechanism , 2010, PloS one.

[71]  N. Cairns,et al.  TDP-43 expression influences amyloidβ plaque deposition and tau aggregation , 2017, Neurobiology of Disease.

[72]  A. Nath,et al.  Role of Tat Protein in HIV Neuropathogenesis , 2009, Neurotoxicity Research.

[73]  G. Magiorkinis,et al.  Activation of the innate immune response by endogenous retroviruses. , 2015, The Journal of general virology.

[74]  L. Cone,et al.  Reversible ALS-like disorder in HIV infection. An ALS-like syndrome with new HIV infection and complete response to antiretroviral therapy. , 2002, Neurology.

[75]  Hong-Yu Hu,et al.  Aggregation of the 35‐kDa fragment of TDP‐43 causes formation of cytoplasmic inclusions and alteration of RNA processing , 2011, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.

[76]  G. Kassiotis,et al.  Endogenous Retroviruses and the Development of Cancer , 2014, The Journal of Immunology.

[77]  W. Rozenbaum,et al.  Reversible ALS-like disorder in HIV infection , 2001, Neurology.

[78]  Robert Belshaw,et al.  Genomewide Screening Reveals High Levels of Insertional Polymorphism in the Human Endogenous Retrovirus Family HERV-K(HML2): Implications for Present-Day Activity , 2005, Journal of Virology.

[79]  Joseph R. Berger,et al.  ALS syndrome in patients with HIV-1 infection , 2006, Journal of the Neurological Sciences.

[80]  L. Carbone,et al.  Endogenous Retroviruses: With Us and against Us , 2017, Front. Chem..

[81]  B. Eley,et al.  Neurologic and Neurobehavioral Sequelae in Children With Human Immunodeficiency Virus (HIV-1) Infection , 2011, Journal of child neurology.

[82]  A. Nath,et al.  Retroviruses and amyotrophic lateral sclerosis. , 2013, Antiviral research.

[83]  M. Vilardell‐Tarrés,et al.  Molecular mechanisms mediated by human endogenous retroviruses (HERVs) in autoimmunity , 2009, Reviews in medical virology.

[84]  J. Dubnau,et al.  Retrotransposon activation contributes to neurodegeneration in a Drosophila TDP-43 model of ALS , 2016, bioRxiv.