Automated Multiplex Assay System for Simultaneous Detection of Hepatitis B Virus DNA, Hepatitis C Virus RNA, and Human Immunodeficiency Virus Type 1 RNA

ABSTRACT We have developed an automated multiplex system for simultaneously screening hepatitis B virus (HBV), hepatitis C virus (HCV), and human immunodeficiency virus type 1 (HIV-1) in blood donations. The assay, designated AMPLINAT MPX HBV/HCV/HIV-1 Test (AMPLINAT MPX), consists of virus extraction and target sequence-specific probe capture on specimen preparation workstation GT-X (Roche Diagnostics K.K., Tokyo, Japan) and amplification and detection by TaqMan PCR on the ABI PRISM 7700 Analyzer (Perkin-Elmer Applied Biosystems, Foster City, Calif.). An internal control (IC) is incorporated in the assay to monitor the extraction, target amplification, and detection processes. The assay yields qualitative results without discrimination of the three targets. Detection limits (95% confidence interval) are 22 to 60 copies/ml for HBV, 61 to 112 IU/ml for HCV, and 33 to 66 copies/ml for HIV-1, using a specimen input volume of 0.2 ml. The AMPLINAT MPX assay detects a broad range of genotypes or subtypes for all three viruses and has a specificity of 99.6% for all three viruses with seronegative specimens. In an evaluation of seroconversion panels, the AMPLINAT MPX assay detects HBV infection an average of 24 days before the detection of HBsAg by enzyme immunoassay. HCV RNA was detected an average of 31 days before HCV antibody. HIV-1 RNA was detected an average of 14 days before HIV-1 antibody and an average of 9 days before p24 antigen. The Japanese Red Cross has been evaluating the AMPLINAT MPX system since October 1999. The clinical performance indicates that the AMPLINAT MPX system is robust, sensitive, and reproducible, with a high percentage of valid assay runs (96.8%), a low false-positive rate (0.34%), and a low IC failure rate (0.24%).

[1]  K. Nishioka,et al.  Nucleic acid amplification testing of hepatitis B virus , 2000, The Lancet.

[2]  M. Busch HIV AND BLOOD TRANSFUSIONS: FOCUS ON SEROCONVERSION , 1994, Vox sanguinis.

[3]  Sanjay Tyagi,et al.  Multiplex detection of four pathogenic retroviruses using molecular beacons. , 1999, Proceedings of the National Academy of Sciences of the United States of America.

[4]  G. Satten,et al.  Time course of detection of viral and serologic markers preceding human immunodeficiency virus type 1 seroconversion: implications for screening of blood and tissue donors , 1995, Transfusion.

[5]  S. Kwok,et al.  Avoiding false positives with PCR , 1989, Nature.

[6]  Russell Higuchi,et al.  Kinetic PCR Analysis: Real-time Monitoring of DNA Amplification Reactions , 1993, Bio/Technology.

[7]  C. Seeger,et al.  Hepatitis B Virus Biology , 2000, Microbiology and Molecular Biology Reviews.

[8]  Thomas D. Schmittgen,et al.  Real-Time Quantitative PCR , 2002 .

[9]  B. Mercier,et al.  Simultaneous screening for HBV DNA and HCV RNA genomes in blood donations using a novel TaqMan PCR assay. , 1999, Journal of virological methods.

[10]  P. Walsh,et al.  Simultaneous Amplification and Detection of Specific DNA Sequences , 1992, Bio/Technology.

[11]  V. Fert,et al.  Simultaneous Detection of Multiplex-Amplified Human Immunodeficiency Virus Type 1 RNA, Hepatitis C Virus RNA, and Hepatitis B Virus DNA Using a Flow Cytometer Microsphere-Based Hybridization Assay , 2000, Journal of Clinical Microbiology.

[12]  K. Gutekunst,et al.  Improved Version 2.0 Qualitative and Quantitative AMPLICOR Reverse Transcription-PCR Tests for Hepatitis C Virus RNA: Calibration to International Units, Enhanced Genotype Reactivity, and Performance Characteristics , 2000, Journal of Clinical Microbiology.

[13]  J. Sninsky,et al.  Rapid and simple PCR assay for quantitation of human immunodeficiency virus type 1 RNA in plasma: application to acute retroviral infection , 1994, Journal of clinical microbiology.

[14]  Z. Loewy,et al.  COBAS AMPLICOR: fully automated RNA and DNA amplification and detection system for routine diagnostic PCR. , 1996, Clinical chemistry.

[15]  A. Heredia,et al.  Development of a multiplex PCR assay for the simultaneous detection and discrimination of HIV-1, HIV-2, HTLV-I and HTLV-II. , 1996, Clinical and diagnostic virology.

[16]  D. van Strijp,et al.  Detection of HIV-1 distribution in different blood fractions by two nucleic acid amplification assays. , 1993, AIDS research and human retroviruses.

[17]  Nationwide nucleic acid amplification testing of hepatitis B virus, hepatitis C virus and human immunodeficiency virus type 1 for blood transfusion and follow-up study of nucleic acid amplification positive donors. , 2000, Japanese journal of infectious diseases.

[18]  Hayato Miyachi,et al.  Automated Specific Capture of Hepatitis C Virus RNA with Probes and Paramagnetic Particle Separation , 2000, Journal of Clinical Microbiology.

[19]  P. Kroeger,et al.  Performance of a Multiplex Qualitative PCR LCx Assay for Detection of Human Immunodeficiency Virus Type 1 (HIV-1) Group M Subtypes, Group O, and HIV-2 , 2000, Journal of Clinical Microbiology.

[20]  N. Almond,et al.  Avoidance of false positives , 1990, Nature.

[21]  K. Mullis The polymerase chain reaction in an anemic mode: how to avoid cold oligodeoxyribonuclear fusion. , 1991, PCR methods and applications.