Dependence of DNA Persistence Length on Ionic Strength and Ion Type.
暂无分享,去创建一个
Nicolas Destainville | Manoel Manghi | C. Tardin | L. Salomé | N. Destainville | M. Manghi | Catherine Tardin | Laurence Salomé | Sébastien Guilbaud | S. Guilbaud
[1] Alexey Savelyev,et al. Chemically accurate coarse graining of double-stranded DNA , 2010, Proceedings of the National Academy of Sciences.
[2] A. Tkachenko,et al. DNA-programmed mesoscopic architecture. , 2013, Physical review. E, Statistical, nonlinear, and soft matter physics.
[3] M. Heldal,et al. X-ray microanalytic method for measurement of dry matter and elemental content of individual bacteria , 1985, Applied and environmental microbiology.
[4] C. Tardin,et al. How does temperature impact the conformation of single DNA molecules below melting temperature? , 2017, Nucleic acids research.
[5] G. S. Manning. The contribution of transient counterion imbalances to DNA bending fluctuations. , 2006, Biophysical journal.
[6] J. R. Rossum. Conductance Method for Checking Accuracy of Water Analyses , 1949 .
[7] Kate Campbell,et al. Remaining Mysteries of Molecular Biology: The Role of Polyamines in the Cell. , 2015, Journal of molecular biology.
[8] M. Fixman. The flexibility of polyelectrolyte molecules , 1982 .
[9] G. S. Manning. A procedure for extracting persistence lengths from light-scattering data on intermediate molecular weight DNA , 1981 .
[10] J. Skolnick,et al. Electrostatic Persistence Length of a Wormlike Polyelectrolyte , 1977 .
[11] O. Kratky,et al. Röntgenuntersuchung gelöster Fadenmoleküle , 1949 .
[12] Jean-Louis Mergny,et al. "Nano-oddities": unusual nucleic acid assemblies for DNA-based nanostructures and nanodevices. , 2014, Accounts of chemical research.
[13] D. Herschlag,et al. Does Cation Size Affect Occupancy and Electrostatic Screening of the Nucleic Acid Ion Atmosphere? , 2016, Journal of the American Chemical Society.
[14] J. Joanny,et al. Persistence Length of Polyelectrolyte Chains , 1993 .
[15] C. Tardin,et al. Probing a label-free local bend in DNA by single molecule tethered particle motion , 2015, Nucleic acids research.
[16] S. Batsanov. Ionic radii for aqueous solutions , 1963 .
[17] Fei Zhang,et al. DNA Origami: Scaffolds for Creating Higher Order Structures. , 2017, Chemical reviews.
[18] C. Tardin,et al. High-throughput single-molecule analysis of DNA–protein interactions by tethered particle motion , 2012, Nucleic acids research.
[19] Sichun Yang,et al. Charge Neutralization Drives the Shape Reconfiguration of DNA Nanotubes. , 2018, Angewandte Chemie.
[20] M. Heldal,et al. Content of carbon, nitrogen, oxygen, sulfur and phosphorus in native aquatic and cultured bacteria , 1996 .
[21] I. Pinto,et al. (Un)suitability of the use of pH buffers in biological, biochemical and environmental studies and their interaction with metal ions – a review , 2015 .
[22] D. Frenkel,et al. Numerical evidence for nucleated self-assembly of DNA brick structures. , 2014, Physical review letters.
[23] Russell P. Goodman,et al. Rapid Chiral Assembly of Rigid DNA Building Blocks for Molecular Nanofabrication , 2005, Science.
[24] Thomas de Quincey. [C] , 2000, The Works of Thomas De Quincey, Vol. 1: Writings, 1799–1820.
[25] Kelly M. Thayer,et al. Ion motions in molecular dynamics simulations on DNA. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[26] C. Tardin,et al. Dependence of DNA Persistence Length on Ionic Strength of Solutions with Monovalent and Divalent Salts: A Joint Theory-Experiment Study , 2015, 1504.02666.
[27] C. Roland,et al. Ion distributions around left- and right-handed DNA and RNA duplexes: a comparative study , 2014, Nucleic acids research.
[28] P. Nelson,et al. Volume-exclusion effects in tethered-particle experiments: bead size matters. , 2005, Physical review letters.
[29] C. Tardin,et al. Probing DNA conformational changes with high temporal resolution by tethered particle motion , 2010, Physical biology.
[30] A. Tulinsky,et al. The structure of alpha-thrombin inhibited by a 15-mer single-stranded DNA aptamer. , 1994, The Journal of biological chemistry.
[31] Seon Jeong Kim,et al. The Peculiar Response of DNA Hydrogel Fibers to a Salt and pH Stimulus. , 2009, Macromolecular rapid communications.
[32] T. Odijk. Polyelectrolytes near the rod limit , 1977 .
[33] S. Smith,et al. Ionic effects on the elasticity of single DNA molecules. , 1997, Proceedings of the National Academy of Sciences of the United States of America.
[34] Jian Peng,et al. Reconstructing spatial organizations of chromosomes through manifold learning , 2018, Nucleic acids research.
[35] H. Orland,et al. Variational charge renormalization in charged systems , 2002, The European physical journal. E, Soft matter.
[36] Matthew W. Pennington,et al. Three-dimensional characterization of tethered microspheres by total internal reflection fluorescence microscopy. , 2005, Biophysical journal.
[37] W. Webb,et al. Ionic strength-dependent persistence lengths of single-stranded RNA and DNA , 2011, Proceedings of the National Academy of Sciences.
[38] Joachim O. Rädler,et al. Shape and Interhelical Spacing of DNA Origami Nanostructures Studied by Small-Angle X-ray Scattering. , 2016, Nano letters.
[39] N. Ribeck,et al. Nonlinear low-force elasticity of single-stranded DNA molecules. , 2009, Physical review letters.
[40] E. Trizac,et al. Effective charge versus bare charge: an analytical estimate for colloids in the infinite dilution limit , 2003, cond-mat/0301061.
[41] Krystyna Zakrzewska,et al. DNA and its counterions: a molecular dynamics study. , 2004, Nucleic acids research.
[42] M. L. Bret. Electrostatic contribution to the persistence length of a polyelectrolyte , 1982 .
[43] I. Rouzina,et al. Salt dependence of the elasticity and overstretching transition of single DNA molecules. , 2002, Biophysical journal.
[44] A. Savelyev. Do monovalent mobile ions affect DNA's flexibility at high salt content? , 2012, Physical chemistry chemical physics : PCCP.
[45] E. Trizac,et al. Bending stiff charged polymers: The electrostatic persistence length , 2016, 1611.00520.
[46] Olivier Bernard,et al. Aqueous solutions of tetraalkylammonium halides: ion hydration, dynamics and ion-ion interactions in light of steric effects. , 2014, Physical chemistry chemical physics : PCCP.
[47] O. Saleh,et al. Electrostatic Effects on the Conformation and Elasticity of Hyaluronic Acid, a Moderately Flexible Polyelectrolyte , 2017 .
[48] Yizhak Marcus,et al. Ionic radii in aqueous solutions , 1983 .