Epitranscriptomic regulation of the response to the air pollutant naphthalene in mouse lungs: from the perspectives of specialized translation and tolerance linked to the writer ALKBH8
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Thomas J. Begley | T. Begley | J. Melendez | P. Dedon | Qing-Yu Zhang | Xinxin Ding | Andrea Leonardi | Lauren Endres | Sara Evke | N. Kovalchuk | L. Winkle | Lei Yin | Steven Nevins | Samuel Martin
[1] B. Buchholz,et al. Naphthalene genotoxicity: DNA adducts in primate and mouse airway explants. , 2019, Toxicology letters.
[2] B. Buchholz,et al. Naphthalene DNA Adduct Formation and Tolerance in the Lung. , 2019, Nuclear instruments & methods in physics research. Section B, Beam interactions with materials and atoms.
[3] R. Eri,et al. Role of Oxidative Stress in the Pathology and Management of Human Tuberculosis , 2018, Oxidative medicine and cellular longevity.
[4] Rajashekar Varma Kadumuri,et al. Epitranscriptomic Code and Its Alterations in Human Disease. , 2018, Trends in molecular medicine.
[5] Sebastian A. Leidel,et al. Codon-specific translation reprogramming promotes resistance to targeted therapy , 2018, Nature.
[6] U. Flögel,et al. Nrf2 Deficiency Unmasks the Significance of Nitric Oxide Synthase Activity for Cardioprotection , 2018, Oxidative medicine and cellular longevity.
[7] B. Brüne,et al. Nrf2, the Master Regulator of Anti-Oxidative Responses , 2017, International journal of molecular sciences.
[8] Stefanie M. Kellner,et al. TRMT1-Catalyzed tRNA Modifications Are Required for Redox Homeostasis To Ensure Proper Cellular Proliferation and Oxidative Stress Survival , 2017, Molecular and Cellular Biology.
[9] P. Edwards,et al. Human CYP2A13 and CYP2F1 Mediate Naphthalene Toxicity in the Lung and Nasal Mucosa of CYP2A13/2F1-Humanized Mice , 2017, Environmental health perspectives.
[10] J. Wedzicha,et al. Blood and sputum eosinophils in COPD; relationship with bacterial load , 2017, Respiratory Research.
[11] J. Tran van Nhieu,et al. Interleukin-6 displays lung anti-inflammatory properties and exerts protective hemodynamic effects in a double-hit murine acute lung injury , 2017, Respiratory Research.
[12] R. Bruno,et al. Increased static and decreased capacity oxidation-reduction potentials in plasma are predictive of metabolic syndrome☆☆☆ , 2017, Redox biology.
[13] Claudio Costantino,et al. Pneumococcal Colonization in the Familial Context and Implications for Anti-Pneumococcal Immunization in Adults: Results from the BINOCOLO Project in Sicily , 2017, International journal of molecular sciences.
[14] Thomas J. Begley,et al. tRNA-mediated codon-biased translation in mycobacterial hypoxic persistence , 2016, Nature Communications.
[15] K. Salottolo,et al. A 24 h Delay in the Redox Response Distinguishes the most Severe StrokePatients from Less Severe Stroke Patients , 2016 .
[16] D. Slone,et al. Oxidation-Reduction Potential as a Biomarker for Severity and Acute Outcome in Traumatic Brain Injury , 2016, Oxidative medicine and cellular longevity.
[17] Thomas J. Begley,et al. Gene- and genome-based analysis of significant codon patterns in yeast, rat and mice genomes with the CUT Codon UTilization tool. , 2016, Methods.
[18] B. Bartosch,et al. Hepatitis C Virus NS5A Protein Triggers Oxidative Stress by Inducing NADPH Oxidases 1 and 4 and Cytochrome P450 2E1 , 2016, Oxidative medicine and cellular longevity.
[19] Wei Sun,et al. Oxidative stress at low levels can induce clustered DNA lesions leading to NHEJ mediated mutations , 2016, Oncotarget.
[20] C. Felser,et al. Negative magnetoresistance without well-defined chirality in the Weyl semimetal TaP , 2015, Nature Communications.
[21] Thomas J. Begley,et al. Trm9-Catalyzed tRNA Modifications Regulate Global Protein Expression by Codon-Biased Translation , 2015, PLoS genetics.
[22] D. Kouretas,et al. Assessment of Oxidative Stress in Septic and Obese Patients Using Markers of Oxidation-reduction Potential. , 2015, In vivo.
[23] Xiaochun Wang,et al. Association analysis of selenoprotein S polymorphisms in Chinese Han with susceptibility to gastric cancer. , 2015, International journal of clinical and experimental medicine.
[24] L. Levin,et al. Biodiversity on the Rocks: Macrofauna Inhabiting Authigenic Carbonate at Costa Rica Methane Seeps , 2015, PloS one.
[25] Thomas J. Begley,et al. Alkbh8 Regulates Selenocysteine-Protein Expression to Protect against Reactive Oxygen Species Damage , 2015, PloS one.
[26] Clement T Y Chan,et al. Highly Predictive Reprogramming of tRNA Modifications Is Linked to Selective Expression of Codon-Biased Genes , 2015, Chemical research in toxicology.
[27] D. Akdemir,et al. Genomic Selection and Association Mapping in Rice (Oryza sativa): Effect of Trait Genetic Architecture, Training Population Composition, Marker Number and Statistical Model on Accuracy of Rice Genomic Selection in Elite, Tropical Rice Breeding Lines , 2015, PLoS genetics.
[28] S. Oh,et al. Effects of age increase on hepatic expression and activity of cytochrome P450 in male C57BL/6 mice , 2015, Archives of pharmacal research.
[29] A. Byström,et al. Elongator, a conserved complex required for wobble uridine modifications in Eukaryotes , 2014, RNA biology.
[30] Xinxin Ding,et al. Identification of cytochrome P450 enzymes critical for lung tumorigenesis by the tobacco-specific carcinogen 4-(methylnitrosamino)-1-(3-pyridyl)-1-butanone (NNK): insights from a novel Cyp2abfgs-null mouse. , 2014, Carcinogenesis.
[31] A. Miele,et al. Thioredoxin Reductase and its Inhibitors , 2014, Current protein & peptide science.
[32] A. Gomes,et al. Nrf2 deficiency prevents reductive stress-induced hypertrophic cardiomyopathy. , 2013, Cardiovascular research.
[33] Q. Ma. Role of nrf2 in oxidative stress and toxicity. , 2013, Annual review of pharmacology and toxicology.
[34] J. Alfonzo,et al. Transfer RNA modifications: nature's combinatorial chemistry playground , 2013, Wiley interdisciplinary reviews. RNA.
[35] Manisha N. Patel,et al. Thioredoxin Reductase Deficiency Potentiates Oxidative Stress, Mitochondrial Dysfunction and Cell Death in Dopaminergic Cells , 2012, PloS one.
[36] D. Hermand,et al. A coordinated codon-dependent regulation of translation by Elongator , 2012, Cell cycle.
[37] Elias S. J. Arnér,et al. Thioredoxin reductase inhibition elicits Nrf2-mediated responses in Clara cells: implications for oxidant-induced lung injury. , 2012, Antioxidants & redox signaling.
[38] Q. Ma,et al. Molecular Basis of Electrophilic and Oxidative Defense: Promises and Perils of Nrf2 , 2012, Pharmacological Reviews.
[39] Ashish Patil,et al. Translational infidelity-induced protein stress results from a deficiency in Trm9-catalyzed tRNA modifications , 2012, RNA biology.
[40] Damien Hermand,et al. Translational control of cell division by Elongator. , 2012, Cell reports.
[41] I. Akirav,et al. Short- and Long-Term Cognitive Effects of Chronic Cannabinoids Administration in Late-Adolescence Rats , 2012, PloS one.
[42] Clement T Y Chan,et al. Reprogramming of tRNA modifications controls the oxidative stress response by codon-biased translation of proteins , 2012, Nature Communications.
[43] Qing-Yu Zhang,et al. Generation and Characterization of a Cyp2f2-Null Mouse and Studies on the Role of CYP2F2 in Naphthalene-Induced Toxicity in the Lung and Nasal Olfactory Mucosa , 2011, Journal of Pharmacology and Experimental Therapeutics.
[44] F. Kirpekar,et al. ALKBH8-mediated formation of a novel diastereomeric pair of wobble nucleosides in mammalian tRNA. , 2011, Nature communications.
[45] Takafumi Suzuki,et al. Nrf2 and selenoproteins are essential for maintaining oxidative homeostasis in erythrocytes and protecting against hemolytic anemia. , 2011, Blood.
[46] D. Sudakin,et al. Naphthalene Mothballs: Emerging and Recurring Issues and their Relevance to Environmental Health. , 2011, Current topics in toxicology.
[47] Clement T Y Chan,et al. A Quantitative Systems Approach Reveals Dynamic Control of tRNA Modifications during Cellular Stress , 2010, PLoS genetics.
[48] Chunrong Jia,et al. A Critical Review of Naphthalene Sources and Exposures Relevant to Indoor and Outdoor Air , 2010, International journal of environmental research and public health.
[49] DelindaA . Johnson,et al. The absence of the pro-antioxidant transcription factor Nrf2 exacerbates experimental autoimmune encephalomyelitis. , 2010, Toxicological sciences : an official journal of the Society of Toxicology.
[50] Z. Alkan,et al. Regulation of Redox Signaling by Selenoproteins , 2010, Biological Trace Element Research.
[51] Clement T Y Chan,et al. Human AlkB Homolog ABH8 Is a tRNA Methyltransferase Required for Wobble Uridine Modification and DNA Damage Survival , 2010, Molecular and Cellular Biology.
[52] F. Kirpekar,et al. Mammalian ALKBH8 Possesses tRNA Methyltransferase Activity Required for the Biogenesis of Multiple Wobble Uridine Modifications Implicated in Translational Decoding , 2010, Molecular and Cellular Biology.
[53] D. Morin,et al. Formation of Covalently Bound Protein Adducts from the Cytotoxicant Naphthalene in Nasal Epithelium: Species Comparisons , 2009, Environmental health perspectives.
[54] A. Zuckerman,et al. IARC Monographs on the Evaluation of Carcinogenic Risks to Humans , 1995, IARC monographs on the evaluation of carcinogenic risks to humans.
[55] C. B. Pickett,et al. The Nrf2-Antioxidant Response Element Signaling Pathway and Its Activation by Oxidative Stress* , 2009, Journal of Biological Chemistry.
[56] P. Hoffmann,et al. The human selenoproteome: recent insights into functions and regulation , 2009, Cellular and Molecular Life Sciences.
[57] K. Hensley,et al. Inhalation of environmental stressors & chronic inflammation: autoimmunity and neurodegeneration. , 2009, Mutation research.
[58] D. Slone,et al. Raman spectral signatures of human liver perfusates correlate with oxidation reduction potential. , 2009, Molecular medicine reports.
[59] S. Novoselov,et al. MsrB1 (Methionine-R-sulfoxide Reductase 1) Knock-out Mice , 2009, Journal of Biological Chemistry.
[60] S. Caudill,et al. Concentration and profile of 22 urinary polycyclic aromatic hydrocarbon metabolites in the US population. , 2008, Environmental research.
[61] J. Vandenhaute,et al. The conserved Wobble uridine tRNA thiolase Ctu1–Ctu2 is required to maintain genome integrity , 2008, Proceedings of the National Academy of Sciences.
[62] R. Aumann,et al. Oxidation-reduction potential and paraoxonase-arylesterase activity in trauma patients. , 2007, Biochemical and biophysical research communications.
[63] M. Capecchi,et al. Effects of thioredoxin reductase-1 deletion on embryogenesis and transcriptome. , 2007, Free radical biology & medicine.
[64] M. Berry,et al. Selenoprotein H Is a Redox-sensing High Mobility Group Family DNA-binding Protein That Up-regulates Genes Involved in Glutathione Synthesis and Phase II Detoxification* , 2007, Journal of Biological Chemistry.
[65] S. Brand,et al. The role of the selenoprotein S (SELS) gene -105G>A promoter polymorphism in inflammatory bowel disease and regulation of SELS gene expression in intestinal inflammation. , 2007, Tissue antigens.
[66] Shyam Biswal,et al. Cell survival responses to environmental stresses via the Keap1-Nrf2-ARE pathway. , 2007, Annual review of pharmacology and toxicology.
[67] M. Cappellini. Coagulation in the pathophysiology of hemolytic anemias. , 2007, Hematology. American Society of Hematology. Education Program.
[68] D. Giustarini,et al. Biomarkers of oxidative damage in human disease. , 2006, Clinical chemistry.
[69] N. Hannan,et al. Activation of the selenoprotein SEPS1 gene expression by pro-inflammatory cytokines in HepG2 cells. , 2006, Cytokine.
[70] S. Reddy,et al. Nrf2 defends the lung from oxidative stress. , 2006, Antioxidants & redox signaling.
[71] K. Elliott,et al. Genetic variation in selenoprotein S influences inflammatory response , 2005, Nature Genetics.
[72] Y. Yoon,et al. Transformation of isolated mammalian mitochondria by bacterial conjugation , 2005, Nucleic acids research.
[73] Moiz Mumtaz,et al. Toxicological profile for naphthalene, 1-methylnaphthalene, and 2-methylnaphthalene , 2005 .
[74] Jun Nakamura,et al. Effects of naphthalene quinonoids on the induction of oxidative DNA damage and cytotoxicity in calf thymus DNA and in human cultured cells. , 2005, Chemical research in toxicology.
[75] Gerhard K. H. Przemeck,et al. Cytoplasmic Thioredoxin Reductase Is Essential for Embryogenesis but Dispensable for Cardiac Development , 2005, Molecular and Cellular Biology.
[76] C. Plopper,et al. Prevention of naphthalene‐induced pulmonary toxicity by glutathione prodrugs: Roles for glutathione depletion in adduct formation and cell injury , 2005, Journal of biochemical and molecular toxicology.
[77] J. Morrow. Quantification of Isoprostanes as Indices of Oxidant Stress and the Risk of Atherosclerosis in Humans , 2004, Arteriosclerosis, thrombosis, and vascular biology.
[78] C. Lewis,et al. Plasma F2-isoprostanes and coronary artery calcification: the CARDIA Study. , 2005, Clinical chemistry.
[79] D. Morin,et al. Glutathione depletion is a major determinant of inhaled naphthalene respiratory toxicity and naphthalene metabolism in mice. , 2004, Toxicological sciences : an official journal of the Society of Toxicology.
[80] W. Wurst,et al. Essential Role for Mitochondrial Thioredoxin Reductase in Hematopoiesis, Heart Development, and Heart Function , 2004, Molecular and Cellular Biology.
[81] Masayuki Yamamoto,et al. Nrf2-Keap1 defines a physiologically important stress response mechanism. , 2004, Trends in molecular medicine.
[82] Irina Petrache,et al. Genetic ablation of Nrf2 enhances susceptibility to cigarette smoke-induced emphysema in mice. , 2004, The Journal of clinical investigation.
[83] C. Lim,et al. Age-related changes in the activity of antioxidant and redox enzymes in rats. , 2003, Molecules and cells.
[84] D. Driscoll,et al. Mechanism and regulation of selenoprotein synthesis. , 2003, Annual review of nutrition.
[85] C. Plopper,et al. Pulmonary heat shock protein expression after exposure to a metabolically activated Clara cell toxicant: relationship to protein adduct formation. , 2003, Toxicology and applied pharmacology.
[86] H. Forman,et al. Repeated inhalation exposures to the bioactivated cytotoxicant naphthalene (NA) produce airway-specific Clara cell tolerance in mice. , 2003, Toxicological sciences : an official journal of the Society of Toxicology.
[87] Paul R Copeland,et al. Regulation of gene expression by stop codon recoding: selenocysteine. , 2003, Gene.
[88] T. Kukharchyk,et al. PAH emission from the open burning of agricultural debris. , 2003, The Science of the total environment.
[89] A. Dinkova-Kostova,et al. Importance of phase 2 gene regulation in protection against electrophile and reactive oxygen toxicity and carcinogenesis. , 2003, Advances in enzyme regulation.
[90] L. Flohé,et al. Gene disruption discloses role of selenoprotein P in selenium delivery to target tissues. , 2003, The Biochemical journal.
[91] G. Powis,et al. The Absence of Mitochondrial Thioredoxin 2 Causes Massive Apoptosis, Exencephaly, and Early Embryonic Lethality in Homozygous Mice , 2003, Molecular and Cellular Biology.
[92] Conrad C. Huang,et al. BayGenomics: a resource of insertional mutations in mouse embryonic stem cells , 2003, Nucleic Acids Res..
[93] Leslie T. Stayner,et al. IARC Monographs on the evaluation of carcinogenic risks to humans: Some traditional herbal medicines, some mycotoxins, naphthalene and styrene , 2002 .
[94] Vadim N. Gladyshev,et al. How Selenium Has Altered Our Understanding of the Genetic Code , 2002, Molecular and Cellular Biology.
[95] Rui‐Ming Liu. Down‐regulation of γ‐glutamylcysteine synthetase regulatory subunit gene expression in rat brain tissue during aging , 2002, Journal of neuroscience research.
[96] Y. Yamaguchi-Iwai,et al. Thioredoxin‐2 (TRX‐2) is an essential gene regulating mitochondria‐dependent apoptosis , 2002, The EMBO journal.
[97] E. Toskala,et al. Induction of tolerance to naphthalene in Clara cells is dependent on a stable phenotypic adaptation favoring maintenance of the glutathione pool. , 2002, The American journal of pathology.
[98] Iarc Monographs,et al. Some traditional herbal medicines, some mycotoxins, naphthalene and styrene. , 2002, IARC monographs on the evaluation of carcinogenic risks to humans.
[99] Y. Kan,et al. An important function of Nrf2 in combating oxidative stress: Detoxification of acetaminophen , 2001, Proceedings of the National Academy of Sciences of the United States of America.
[100] C. Colton,et al. Mechanisms of the antioxidant effects of nitric oxide. , 2001, Antioxidants & redox signaling.
[101] C. Plopper,et al. Early events in naphthalene-induced acute Clara cell toxicity. II. Comparison of glutathione depletion and histopathology by airway location. , 2001, American journal of respiratory cell and molecular biology.
[102] R. Herbert,et al. Toxicity and carcinogenicity study in F344 rats following 2 years of whole-body exposure to naphthalene vapors. , 2001, Inhalation toxicology.
[103] B. Carlson,et al. A novel RNA binding protein, SBP2, is required for the translation of mammalian selenoprotein mRNAs , 2000, The EMBO journal.
[104] C. Plopper,et al. Early events in naphthalene-induced acute Clara cell toxicity: comparison of membrane permeability and ultrastructure. , 1999, American journal of respiratory cell and molecular biology.
[105] P. Patterson,et al. Leukemia Inhibitory Factor, Interleukin 6, and Other Cytokines Using the GP130 Transducing Receptor: Roles in Inflammation and Injury , 1999, Stem cells.
[106] D. Bagchi,et al. Induction of oxidative stress and DNA damage by chronic administration of naphthalene to rats. , 1998, Research communications in molecular pathology and pharmacology.
[107] P Griffiths,et al. Mice with a Homozygous Null Mutation for the Most Abundant Glutathione Peroxidase, Gpx1, Show Increased Susceptibility to the Oxidative Stress-inducing Agents Paraquat and Hydrogen Peroxide* , 1998, The Journal of Biological Chemistry.
[108] D. Bagchi,et al. Naphthalene-induced oxidative stress and DNA damage in cultured macrophage J774A.1 cells. , 1998, Free radical biology & medicine.
[109] H. Wallin,et al. Adduct formation, mutagenesis and nucleotide excision repair of DNA damage produced by reactive oxygen species and lipid peroxidation product. , 1998, Mutation research.
[110] E. Rogakou,et al. DNA Double-stranded Breaks Induce Histone H2AX Phosphorylation on Serine 139* , 1998, The Journal of Biological Chemistry.
[111] O Pelkonen,et al. Age and cytochrome P450‐linked drug metabolism in humans: An analysis of 226 subjects with equal histopathologic conditions , 1997, Clinical pharmacology and therapeutics.
[112] M. Berry,et al. Knowing when not to stop: selenocysteine incorporation in eukaryotes. , 1996, Trends in biochemical sciences.
[113] C. Plopper,et al. Cellular response in naphthalene-induced Clara cell injury and bronchiolar epithelial repair in mice. , 1995, The American journal of physiology.
[114] Mathias Sprinzl,et al. Compilation of tRNA sequences and sequences of tRNA genes , 1993, Nucleic Acids Res..
[115] Joseph K. Haseman,et al. Naphthalene: A Respiratory Tract Toxicant and Carcinogen for Mice , 1992 .
[116] Theresa S. Chen,et al. The Effect of Aging on Glutathione and Cysteine Levels in Different Regions of the Mouse Brain , 1989, Proceedings of the Society for Experimental Biology and Medicine. Society for Experimental Biology and Medicine.
[117] A. Buckpitt,et al. Evidence for hepatic formation, export and covalent binding of reactive naphthalene metabolites in extrahepatic tissues in vivo. , 1983, The Journal of pharmacology and experimental therapeutics.
[118] D. Brown,et al. Evidence for cytochrome P-450 mediated metabolism in the bronchiolar damage by naphthalene. , 1982, Chemico-biological interactions.
[119] L. Samson,et al. A new pathway for DNA repair in Escherichia coli , 1977, Nature.