Assimilating Multiresolution Leaf Area Index of Moso Bamboo Forest from MODIS Time Series Data Based on a Hierarchical Bayesian Network Algorithm

The highly accurate multiresolution leaf area index (LAI) is an important parameter for carbon cycle simulation for bamboo forests at different scales. However, current LAI products have discontinuous resolution with 1 km mostly, that makes it difficult to accurately quantify the spatiotemporal evolution of carbon cycle at different resolutions. Thus, this study used MODIS LAI product (MOD15A2) and MODIS reflectance data (MOD09Q1) of Moso bamboo forest (MBF) from 2015, and it adopted a hierarchical Bayesian network (HBN) algorithm coupled with a dynamic LAI model and the PROSAIL model to obtain high-precision LAI data at multiresolution (i.e., 1000, 500, and 250 m). The results showed the LAIs assimilated using the HBN at the three resolutions corresponded with the actual growth trend of the MBF and correlated significantly with the observed LAI with a determination coefficient (R2) value of >0.80. The highest-precision assimilated LAI was obtained at 1000-m resolution with R2 values of 0.91. The LAI assimilated using the HBN algorithm achieved better accuracy than the MODIS LAI with increases in the R2 value of 2.7 times and decreases in the root mean square error of 87.8%. Therefore, the HBN algorithm applied in this study can effectively obtain highly accurate multiresolution LAI time series data for bamboo forest.

[1]  Montserrat Fuentes,et al.  Model Evaluation and Spatial Interpolation by Bayesian Combination of Observations with Outputs from Numerical Models , 2005, Biometrics.

[2]  J. Chen,et al.  Defining leaf area index for non‐flat leaves , 1992 .

[3]  Jingyu Feng,et al.  Combining numerical model output and particulate data using Bayesian space–time modeling , 2009 .

[4]  Xuejian Li,et al.  Assimilating leaf area index of three typical types of subtropical forest in China from MODIS time series data based on the integrated ensemble Kalman filter and PROSAIL model , 2017 .

[5]  Ma Jianwen,et al.  Recent Advances and Development of Data Assimilation Algorithms , 2012 .

[6]  W. K. Hastings,et al.  Monte Carlo Sampling Methods Using Markov Chains and Their Applications , 1970 .

[7]  Jianwen Ma,et al.  Construction and Experiment of Hierarchical Bayesian Network in Data Assimilation , 2013, IEEE J. Sel. Top. Appl. Earth Obs. Remote. Sens..

[8]  L. Mark Berliner,et al.  Combining Information Across Spatial Scales , 2005, Technometrics.

[9]  M. Bierlaire,et al.  Metropolis-Hastings sampling of paths , 2013 .

[10]  Jindi Wang,et al.  Multiscale Estimation of Leaf Area Index from Satellite Observations Based on an Ensemble Multiscale Filter , 2016, Remote. Sens..

[11]  Liang Chen,et al.  Comparison of Two Data Assimilation Methods for Improving MODIS LAI Time Series for Bamboo Forests , 2017, Remote. Sens..

[12]  S. R. Searle,et al.  Generalized, Linear, and Mixed Models , 2005 .

[13]  Shunlin Liang,et al.  Using multiresolution tree to integrate MODIS and MISR-L3 LAI products , 2010, 2010 IEEE International Geoscience and Remote Sensing Symposium.

[14]  Liming Zhou,et al.  Dynamics of leaf area for climate and weather models , 2008 .

[15]  Adrian F. M. Smith,et al.  Bayesian computation via the gibbs sampler and related markov chain monte carlo methods (with discus , 1993 .

[16]  Rasmus Fensholt,et al.  MODIS leaf area index products: from validation to algorithm improvement , 2006, IEEE Transactions on Geoscience and Remote Sensing.

[17]  Bin Liu,et al.  Crop model data assimilation with particle filter for yield prediction using leaf area index of different temporal scales , 2015, 2015 Fourth International Conference on Agro-Geoinformatics (Agro-geoinformatics).

[18]  Frédéric Baret,et al.  Review of methods for in situ leaf area index determination Part I. Theories, sensors and hemispherical photography , 2004 .

[19]  O. Hagolle,et al.  LAI, fAPAR and fCover CYCLOPES global products derived from VEGETATION: Part 1: Principles of the algorithm , 2007 .

[20]  W. Verhoef,et al.  Coupled soil–leaf-canopy and atmosphere radiative transfer modeling to simulate hyperspectral multi-angular surface reflectance and TOA radiance data , 2007 .

[21]  J. Geweke,et al.  Bayesian Inference in Econometric Models Using Monte Carlo Integration , 1989 .

[22]  Gardar Johannesson Multi-Resolution Statistical Modeling in Space and Time With Application to Remote Sensing of the Environment , 2003 .

[23]  Zhiqiang Xiao,et al.  Reprocessing the MODIS Leaf Area Index products for land surface and climate modelling , 2011 .

[24]  H. Mooney,et al.  Modeling the Exchanges of Energy, Water, and Carbon Between Continents and the Atmosphere , 1997, Science.

[25]  L. M. Berliner,et al.  Hierarchical Bayesian space-time models , 1998, Environmental and Ecological Statistics.

[26]  Zhou Guo-mo Dynamic change of Phyllostachys edulis forest canopy parameters and their relationships with photosynthetic active radiation in the bamboo shooting growth phase , 2012 .

[27]  D. Cocchi,et al.  Hierarchical space-time modelling of PM10 pollution , 2007 .

[28]  Herbert K. H. Lee,et al.  Multiscale Modeling: A Bayesian Perspective , 2007 .

[29]  Jindi Wang,et al.  Multiscale approach for fusing leaf area index estimates from multiple sensors , 2007, International Symposium on Multispectral Image Processing and Pattern Recognition.

[30]  J. Geweke,et al.  Bayesian estimation of state-space models using the Metropolis-Hastings algorithm within Gibbs sampling , 2001 .

[31]  Liu Jiyuan,et al.  Multi-scale observation and cross-scale mechanistic modeling on terrestrial ecosystem carbon cycle , 2005 .

[32]  Yanxia Zhao,et al.  Assimilating remote sensing information with crop model using Ensemble Kalman Filter for improving LAI monitoring and yield estimation , 2013 .

[33]  S. Running,et al.  Global products of vegetation leaf area and fraction absorbed PAR from year one of MODIS data , 2002 .

[34]  Robert E. Wolfe,et al.  An Algorithm to Produce Temporally and Spatially Continuous MODIS-LAI Time Series , 2008, IEEE Geoscience and Remote Sensing Letters.

[35]  L. Mark Berliner,et al.  Bayesian hierarchical modeling of air-sea interaction , 2003 .

[36]  L. M. Berliner,et al.  A Bayesian tutorial for data assimilation , 2007 .

[37]  S. Chib,et al.  Understanding the Metropolis-Hastings Algorithm , 1995 .

[38]  Pingheng Li,et al.  [Simulating of carbon fluxes in bamboo forest ecosystem using BEPS model based on the LAI assimilated with Dual Ensemble Kalman Filter]. , 2016, Ying yong sheng tai xue bao = The journal of applied ecology.

[39]  Qi Jing,et al.  Estimating winter wheat biomass by assimilating leaf area index derived from fusion of Landsat-8 and MODIS data , 2016, Int. J. Appl. Earth Obs. Geoinformation.

[40]  Joshua Gray,et al.  Mapping leaf area index using spatial, spectral, and temporal information from multiple sensors , 2011 .

[41]  Alan E Gelfand,et al.  A Spatio-Temporal Downscaler for Output From Numerical Models , 2010, Journal of agricultural, biological, and environmental statistics.

[42]  Haiying Huang,et al.  Multiscale Statistical Models for Hierarchical Spatial Aggregation , 2010 .

[43]  Xiaojun Xu,et al.  Estimating Aboveground Carbon of Moso Bamboo Forests Using the k Nearest Neighbors Technique and Satellite Imagery , 2011 .

[44]  A. Gelfand,et al.  Combining monitoring data and computer model output in assessing environmental exposure , 2010 .

[45]  Philip Lewis,et al.  An assessment of the MODIS collection 5 leaf area index product for a region of mixed coniferous forest , 2011 .

[46]  W. Verhoef,et al.  PROSPECT+SAIL models: A review of use for vegetation characterization , 2009 .

[47]  Kun Yang,et al.  Comparison of the Spatial Characteristics of Four Remotely Sensed Leaf Area Index Products over China: Direct Validation and Relative Uncertainties , 2018, Remote. Sens..

[48]  Xiaojun Xu,et al.  Spatiotemporal heterogeneity of Moso bamboo aboveground carbon storage with Landsat Thematic Mapper images: a case study from Anji County, China , 2013 .

[49]  Roberta E. Martin,et al.  PROSPECT-4 and 5: Advances in the leaf optical properties model separating photosynthetic pigments , 2008 .

[50]  Guo-mo Zhou,et al.  [Retrieval of leaf area index of moso bamboo forest with Landsat Thematic Mapper image based on PROSAIL canopy radiative transfer model]. , 2013, Ying yong sheng tai xue bao = The journal of applied ecology.

[51]  S. Sahu,et al.  Improved space–time forecasting of next day ozone concentrations in the eastern US , 2009 .

[52]  Dennis McLaughlin,et al.  An integrated approach to hydrologic data assimilation: interpolation, smoothing, and filtering , 2002 .

[53]  R. Lacaze,et al.  A Global Database of Land Surface Parameters at 1-km Resolution in Meteorological and Climate Models , 2003 .

[54]  Michael F. Jasinski,et al.  Effective Interpolation of Incomplete Satellite-Derived Leaf-Area Index Time Series for the Continental United States , 2009 .

[55]  L. Bruzzone,et al.  Retrieval of Leaf Area Index in mountain grasslands in the Alps from MODIS satellite imagery , 2015 .

[56]  S. Liang,et al.  Real-time retrieval of Leaf Area Index from MODIS time series data , 2011 .

[57]  L. Mark Berliner,et al.  Hierarchical Bayesian Time Series Models , 1996 .

[58]  Weiliang Fan,et al.  Estimating bamboo forest aboveground biomass using EnKF-assimilated MODIS LAI spatiotemporal data and machine learning algorithms , 2018, Agricultural and Forest Meteorology.

[59]  Noel A Cressie,et al.  Fast, Resolution-Consistent Spatial Prediction of Global Processes From Satellite Data , 2002 .

[60]  Jinsheng He Carbon cycling of Chinese forests: From carbon storage, dynamics to models , 2012, Science China Life Sciences.

[61]  Jianwen Ma,et al.  Development of a hierarchical Bayesian network algorithm for land surface data assimilation , 2013 .

[62]  Jing M. Chen,et al.  Locally adjusted cubic-spline capping for reconstructing seasonal trajectories of a satellite-derived surface parameter , 2006, IEEE Transactions on Geoscience and Remote Sensing.

[63]  Christopher K. Wikle,et al.  Climatological analysis of tornado report counts using a hierarchical Bayesian spatiotemporal model , 2003 .

[64]  A. Gelfand,et al.  High-Resolution Space–Time Ozone Modeling for Assessing Trends , 2007, Journal of the American Statistical Association.

[65]  J. Townshend,et al.  Spatially and temporally continuous LAI data sets based on an integrated filtering method: Examples from North America , 2008 .

[66]  Guo-mo Zhou,et al.  [Retrieval of leaf net photosynthetic rate of moso bamboo forests using hyperspectral remote sen-sing based on wavelet transform]. , 2016, Ying yong sheng tai xue bao = The journal of applied ecology.

[67]  J. Andrew Royle,et al.  Bayesian Methods in the Atmospheric Sciences , 2007 .

[68]  Jan Pisek,et al.  Algorithm for global leaf area index retrieval using satellite imagery , 2006, IEEE Transactions on Geoscience and Remote Sensing.

[69]  Weiliang Fan,et al.  Satellite-based carbon stock estimation for bamboo forest with a non-linear partial least square regression technique , 2012 .