论文信息 - GHap: an R package for genome-wide haplotyping

GHap: an R package for genome-wide haplotyping

UNLABELLED The GHap R package was designed to call haplotypes from phased marker data. Given user-defined haplotype blocks (HapBlock), the package identifies the different haplotype alleles (HapAllele) present in the data and scores sample haplotype allele genotypes (HapGenotype) based on HapAllele dose (i.e. 0, 1 or 2 copies). The output is not only useful for analyses that can handle multi-allelic markers, but is also conveniently formatted for existing pipelines intended for bi-allelic markers. AVAILABILITY AND IMPLEMENTATION https://cran.r-project.org/package=GHap CONTACT ytutsunomiya@gmail.com SUPPLEMENTARY INFORMATION Supplementary data are available at Bioinformatics online.

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