Shotgun cross-linking analysis for studying quaternary and tertiary protein structures.
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Brett S Phinney | Laura L Lackner | B. Phinney | J. Nunnari | L. Lackner | Young Jin Lee | Jodi M Nunnari
[1] David Fenyö,et al. Probity: a protein identification algorithm with accurate assignment of the statistical significance of the results. , 2004, Journal of proteome research.
[2] S. Schmid,et al. Impairment of dynamin's GAP domain stimulates receptor-mediated endocytosis , 1999, Nature.
[3] A. Sinz,et al. Mapping low-resolution three-dimensional protein structures using chemical cross-linking and Fourier transform ion-cyclotron resonance mass spectrometry. , 2003, Rapid communications in mass spectrometry : RCM.
[4] C. Blackstone,et al. Intra- and Intermolecular Domain Interactions of the C-terminal GTPase Effector Domain of the Multimeric Dynamin-like GTPase Drp1* , 2004, Journal of Biological Chemistry.
[5] J. McCaffery,et al. Dnm1 forms spirals that are structurally tailored to fit mitochondria , 2005, The Journal of cell biology.
[6] David R Goodlett,et al. Pro-CrossLink. Software tool for protein cross-linking and mass spectrometry. , 2006, Analytical chemistry.
[7] J. Yates,et al. Statistical characterization of ion trap tandem mass spectra from doubly charged tryptic peptides. , 2003, Analytical chemistry.
[8] Frank Alber,et al. Unraveling the interface of signal recognition particle and its receptor by using chemical cross-linking and tandem mass spectrometry. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[9] A. M. van der Bliek,et al. A Model for Dynamin Self-assembly Based on Binding Between Three Different Protein Domains* , 1999, The Journal of Biological Chemistry.
[10] Yong Tang,et al. CLPM: A Cross-Linked Peptide Mapping Algorithm for Mass Spectrometric Analysis , 2005, BMC Bioinformatics.
[11] Ning Zhang,et al. Protein cross-linking analysis using mass spectrometry, isotope-coded cross-linkers, and integrated computational data processing. , 2006, Journal of proteome research.
[12] Richard D. Smith,et al. Characterization of purified c-type heme-containing peptides and identification of c-type heme-attachment sites in Shewanella oneidenis cytochromes using mass spectrometry. , 2005, Journal of proteome research.
[13] L. Pannell,et al. Intramolecular cross-linking experiments on cytochrome c and ribonuclease A using an isotope multiplet method. , 2002, Rapid communications in mass spectrometry : RCM.
[14] A. Sinz,et al. Mapping protein interfaces with a fluorogenic cross-linker and mass spectrometry: application to nebulin-calmodulin complexes. , 2001, Biochemistry.
[15] Malin M. Young,et al. High throughput protein fold identification by using experimental constraints derived from intramolecular cross-links and mass spectrometry , 2000, Proc. Natl. Acad. Sci. USA.
[16] Simon J. Gaskell,et al. Metastable decomposition of peptide [M + H]+ ions via rearrangement involving loss of the C-terminal amino acid residue , 1990 .
[17] Bill X. Huang,et al. Interdomain Conformational Changes in Akt Activation Revealed by Chemical Cross-linking and Tandem Mass Spectrometry* , 2006, Molecular & Cellular Proteomics.
[18] R. Aebersold,et al. A statistical model for identifying proteins by tandem mass spectrometry. , 2003, Analytical chemistry.
[19] R. Beavis,et al. A method for assessing the statistical significance of mass spectrometry-based protein identifications using general scoring schemes. , 2003, Analytical chemistry.
[20] Robertson Craig,et al. TANDEM: matching proteins with tandem mass spectra. , 2004, Bioinformatics.
[21] Karl Mechtler,et al. Isotope-labeled cross-linkers and fourier transform ion cyclotron resonance mass spectrometry for structural analysis of a protein/peptide complex , 2006, Journal of the American Society for Mass Spectrometry.
[22] S. Schmid,et al. Dynamin Self-assembly Stimulates Its GTPase Activity* , 1996, The Journal of Biological Chemistry.
[23] S. Schmid,et al. Domain structure and intramolecular regulation of dynamin GTPase , 1997, The EMBO journal.
[24] W. Ens,et al. Formation of (bn−1 + H2O) ions by collisional activation of maldi-formed peptide [M + H]+ ions in a QqTOF mass spectrometer , 2007, Journal of the American Society for Mass Spectrometry.
[25] H. Gray,et al. Solution structure of oxidized horse heart cytochrome c. , 1997, Biochemistry.
[26] M. Hadi,et al. Influence of crosslinker identity and position on gas-phase dissociation of lys-lys crosslinked peptides , 2006, Journal of the American Society for Mass Spectrometry.
[27] T. Sixma,et al. Identification of cross-linked peptides for protein interaction studies using mass spectrometry and 18O labeling. , 2002, Analytical chemistry.
[28] I. Mills,et al. GTPase activity of dynamin and resulting conformation change are essential for endocytosis , 2001, Nature.
[29] Nathan E Hall,et al. Characterization of an Antagonist Interleukin-6 Dimer by Stable Isotope Labeling, Cross-linking, and Mass Spectrometry* , 2002, The Journal of Biological Chemistry.
[30] A. M. van der Bliek. Functional diversity in the dynamin family. , 1999, Trends in cell biology.
[31] Birgit Schilling,et al. MS2Assign, automated assignment and nomenclature of tandem mass spectra of chemically crosslinked peptides , 2003, Journal of the American Society for Mass Spectrometry.