The DIANA-mirExTra Web Server: From Gene Expression Data to MicroRNA Function
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A. Hatzigeorgiou | P. Alexiou | Manolis Maragkakis | G. Papadopoulos | Victor A. Simmosis | Lin Zhang
[1] Hiroyuki Ogata,et al. KEGG: Kyoto Encyclopedia of Genes and Genomes , 1999, Nucleic Acids Res..
[2] H. Bussemaker,et al. Regulatory element detection using correlation with expression , 2001, Nature Genetics.
[3] Hao Li,et al. Regulatory element detection using correlation with expression (abstract only) , 2001, RECOMB.
[4] D. Bartel. MicroRNAs Genomics, Biogenesis, Mechanism, and Function , 2004, Cell.
[5] A. Hatzigeorgiou,et al. A combined computational-experimental approach predicts human microRNA targets. , 2004, Genes & development.
[6] J. Castle,et al. Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAs , 2005, Nature.
[7] C. Burge,et al. Conserved Seed Pairing, Often Flanked by Adenosines, Indicates that Thousands of Human Genes are MicroRNA Targets , 2005, Cell.
[8] N. Rajewsky,et al. Silencing of microRNAs in vivo with ‘antagomirs’ , 2005, Nature.
[9] Sam Griffiths-Jones,et al. miRBase: the microRNA sequence database. , 2006, Methods in molecular biology.
[10] Wilfred W. Li,et al. MEME: discovering and analyzing DNA and protein sequence motifs , 2006, Nucleic Acids Res..
[11] N. Rajewsky,et al. Cell-type-specific signatures of microRNAs on target mRNA expression. , 2006, Proceedings of the National Academy of Sciences of the United States of America.
[12] Anton J. Enright,et al. Detecting microRNA binding and siRNA off-target effects from expression data , 2008, Nature Methods.
[13] Artemis G. Hatzigeorgiou,et al. Genomic and epigenetic alterations deregulate microRNA expression in human epithelial ovarian cancer , 2008, Proceedings of the National Academy of Sciences.
[14] N. Rajewsky,et al. Widespread changes in protein synthesis induced by microRNAs , 2008, Nature.
[15] Andreas Prlic,et al. Ensembl 2008 , 2007, Nucleic Acids Res..
[16] Ran Elkon,et al. Removal of AU Bias from Microarray mRNA Expression Data Enhances Computational Identification of Active MicroRNAs , 2008, PLoS Comput. Biol..
[17] Peer Bork,et al. KEGG Atlas mapping for global analysis of metabolic pathways , 2008, Nucleic Acids Res..
[18] C. Burge,et al. Most mammalian mRNAs are conserved targets of microRNAs. , 2008, Genome research.
[19] Martin Reczko,et al. DIANA-mirPath: Integrating human and mouse microRNAs in pathways , 2009, Bioinform..
[20] Nectarios Koziris,et al. Accurate microRNA target prediction correlates with protein repression levels , 2009, BMC Bioinformatics.
[21] Bing Su,et al. Small but influential: the role of microRNAs on gene regulatory network and 3'UTR evolution. , 2009, Journal of genetics and genomics = Yi chuan xue bao.
[22] W. J. Kent,et al. The UCSC Genome Browser , 2003, Current protocols in bioinformatics.
[23] Nectarios Koziris,et al. DIANA-microT web server: elucidating microRNA functions through target prediction , 2009, Nucleic Acids Res..