ExaBayes: Massively Parallel Bayesian Tree Inference for the Whole-Genome Era
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Alexandros Stamatakis | Kassian Kobert | Andre J. Aberer | A. Stamatakis | A. Aberer | K. Kobert | Kassian Kobert
[1] W. Fitch,et al. Construction of phylogenetic trees. , 1967, Science.
[2] W. K. Hastings,et al. Monte Carlo Sampling Methods Using Markov Chains and Their Applications , 1970 .
[3] S. Tavaré. Some probabilistic and statistical problems in the analysis of DNA sequences , 1986 .
[4] Alexandros Stamatakis,et al. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies , 2014, Bioinform..
[5] C. Geyer. Markov Chain Monte Carlo Maximum Likelihood , 1991 .
[6] Alexandros Stamatakis,et al. Decisive Data Sets in Phylogenomics: Lessons from Studies on the Phylogenetic Relationships of Primarily Wingless Insects , 2013, Molecular biology and evolution.
[7] Sandhya Dwarkadas,et al. Parallel Metropolis coupled Markov chain Monte Carlo for Bayesian phylogenetic inference , 2002, Bioinform..
[8] O. Gascuel,et al. New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0. , 2010, Systematic biology.
[9] Alexandros Stamatakis,et al. Algorithms, data structures, and numerics for likelihood-based phylogenetic inference of huge trees , 2011, BMC Bioinformatics.
[10] J. Huelsenbeck,et al. Efficiency of Markov chain Monte Carlo tree proposals in Bayesian phylogenetics. , 2008, Systematic biology.
[11] M. Suchard,et al. Bayesian Phylogenetics with BEAUti and the BEAST 1.7 , 2012, Molecular biology and evolution.
[12] David Q. Matus,et al. Broad phylogenomic sampling improves resolution of the animal tree of life , 2008, Nature.
[13] Ziheng Yang. Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: Approximate methods , 1994, Journal of Molecular Evolution.
[14] Maxim Teslenko,et al. MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space , 2012, Systematic biology.
[15] Natalia N. Ivanova,et al. Insights into the phylogeny and coding potential of microbial dark matter , 2013, Nature.
[16] Ziheng Yang. Statistical Properties of the Maximum Likelihood Method of Phylogenetic Estimation and Comparison With Distance Matrix Methods , 1994 .