The ArrayGrid: a methodology for applying multiple samples to a single TEM specimen grid.

High throughput transmission electron microscopy (TEM) is limited by the time that it takes to prepare each specimen and insert it on the microscope. It is further impeded by the deteriorating vacuum of the microscope upon frequent specimen cycling. Nevertheless, in most cases only a small fraction of the specimen is examined and sufficient to provide hundreds of images. Here we demonstrate that microarray technology can be used to accurately position picoliter quantities of different samples in a single TEM grid, with negligible cross-contamination. Key features are a contact-mode deposition on a robust formvar-carbon support. The TEM grid containing a microarray of different samples, the ArrayGrid, can also be negatively stained. The ArrayGrid increases the efficiency of TEM grid preparation and examination by at least by one order of magnitude, and is very suitable for screening and data collection especially in experiments that generate a multiplicity of samples.

[1]  Larry J Kricka,et al.  Current perspectives in protein array technology , 2006, Annals of clinical biochemistry.

[2]  Kenneth H. Downing,et al.  Structure of the αβ tubulin dimer by electron crystallography , 1998, Nature.

[3]  Nancy A Monteiro-Riviere,et al.  Mechanisms of quantum dot nanoparticle cellular uptake. , 2009, Toxicological sciences : an official journal of the Society of Toxicology.

[4]  Christopher Irving,et al.  A toolbox for ab initio 3-D reconstructions in single-particle electron microscopy. , 2010, Journal of structural biology.

[5]  M. Sherman,et al.  Negative staining of proteins. , 1990, Electron microscopy reviews.

[6]  R Henderson,et al.  Electron-crystallographic refinement of the structure of bacteriorhodopsin. , 1996, Journal of molecular biology.

[7]  Thomas Walz,et al.  Single particle reconstructions of the transferrin-transferrin receptor complex obtained with different specimen preparation techniques. , 2006, Journal of molecular biology.

[8]  B. Carragher,et al.  Spotiton: a prototype for an integrated inkjet dispense and vitrification system for cryo-TEM. , 2012, Journal of structural biology.

[9]  G. Ramsay DNA chips: State-of-the art , 1998, Nature Biotechnology.

[10]  Robert M Glaeser,et al.  Specimen Charging on Thin Films with One Conducting Layer: Discussion of Physical Principles , 2003, Microscopy and Microanalysis.

[11]  J. Frank,et al.  Three‐dimensional reconstruction from a single‐exposure, random conical tilt series applied to the 50S ribosomal subunit of Escherichia coli , 1987, Journal of microscopy.

[12]  Jitendra Malik,et al.  Automated multi-model reconstruction from single-particle electron microscopy data. , 2010, Journal of structural biology.

[13]  A. Engel,et al.  Two‐dimensional crystals: a powerful approach to assess structure, function and dynamics of membrane proteins , 2001, FEBS letters.

[14]  A. J. Wilson,et al.  Procedures in electron microscopy , 1993 .

[15]  Thomas Walz,et al.  Negative Staining and Image Classification – Powerful Tools in Modern Electron Microscopy , 2004, Biological Procedures Online.

[16]  Anchi Cheng,et al.  Automated molecular microscopy: the new Leginon system. , 2005, Journal of structural biology.

[17]  Younes Ghasemi,et al.  Quantum dot: magic nanoparticle for imaging, detection and targeting. , 2009, Acta bio-medica : Atenei Parmensis.

[18]  R. Henderson,et al.  Model for the structure of bacteriorhodopsin based on high-resolution electron cryo-microscopy. , 1990, Journal of molecular biology.

[19]  S. Scheres,et al.  Ribosome structures to near-atomic resolution from thirty thousand cryo-EM particles , 2013, eLife.

[20]  Z. Zhou,et al.  Towards atomic resolution structural determination by single-particle cryo-electron microscopy. , 2008, Current opinion in structural biology.

[21]  R. Rand,et al.  Water in actin polymerization. , 1999, Biophysical journal.

[22]  Mingjun Zhang,et al.  Bio-Microarray Fabrication Techniques—A Review , 2006, Critical reviews in biotechnology.

[23]  D. DeRosier,et al.  The reconstruction of a three-dimensional structure from projections and its application to electron microscopy , 1970, Proceedings of the Royal Society of London. A. Mathematical and Physical Sciences.

[24]  Tamir Gonen,et al.  Aquaporin-0 membrane junctions reveal the structure of a closed water pore , 2004, Nature.

[25]  J. Frank Three-Dimensional Electron Microscopy of Macromolecular Assemblies , 2006 .

[26]  David P. Kreil,et al.  Robotic spotting of cDNA and oligonucleotide microarrays. , 2005, Trends in biotechnology.

[27]  Montserrat Samsó,et al.  Internal structure and visualization of transmembrane domains of the RyR1 calcium release channel by cryo-EM , 2005, Nature Structural &Molecular Biology.

[28]  Gilles Hermann,et al.  Automated screening of 2D crystallization trials using transmission electron microscopy: a high-throughput tool-chain for sample preparation and microscopic analysis. , 2011, Journal of structural biology.

[29]  Andreas Hierlemann,et al.  Connecting μ-fluidics to electron microscopy. , 2012, Journal of structural biology.

[30]  John J. Bozzola,et al.  Electron microscopy : principles and techniques for biologists , 1992 .

[31]  A. Engel Assessing Biological Samples with Scanning Probes , 2010 .

[32]  J. Harris,et al.  Negative staining and cryo-negative staining of macromolecules and viruses for TEM. , 2011, Micron.

[33]  M. Johnson,et al.  Screening for two-dimensional crystals by transmission electron microscopy of negatively stained samples. , 2013, Methods in molecular biology.

[34]  J Frank,et al.  Computer averaging of electron micrographs of 40S ribosomal subunits. , 1981, Science.