Imaging brain extended sources from EEG/MEG based on variation sparsity using automatic relevance determination

Abstract Estimating the extents and localizations of extended sources from noninvasive EEG/MEG signals is challenging. In this paper, we have proposed a fully data driven source imaging method, namely Variation Sparse Source Imaging based on Automatic Relevance Determination (VSSI-ARD), to reconstruct extended cortical activities. VSSI-ARD explores the sparseness of current sources on the variation domain by employing ARD prior under empirical Bayesian framework. With convex analysis, the sources are efficiently obtained by solving a series of reweighting L21-norm regularization problems with ADMM. By virtue of the iterative reweighting process and sparse signal processing techniques, VSSI-ARD gets rid of the small amplitude dipoles that are more probably outside the extent of underlying sources. With the sparsity enforced on the edges using ARD prior, the estimations show clear boundaries between active and background regions without subjective thresholds. Validation with both simulated and human experimental data indicates that VSSI-ARD not only estimates the localizations of sources, but also provides relatively useful and accurate information about the extents of cortical activities.

[1]  Julia P. Owen,et al.  Robust Bayesian estimation of the location, orientation, and time course of multiple correlated neural sources using MEG , 2010, NeuroImage.

[2]  Kee-Eung Kim,et al.  An Improved Particle Filter With a Novel Hybrid Proposal Distribution for Quantitative Analysis of Gold Immunochromatographic Strips , 2019, IEEE Transactions on Nanotechnology.

[3]  Wei Wu,et al.  Bayesian electromagnetic spatio-temporal imaging of extended sources with Markov Random Field and temporal basis expansion , 2016, NeuroImage.

[4]  R. Ilmoniemi,et al.  Magnetoencephalography-theory, instrumentation, and applications to noninvasive studies of the working human brain , 1993 .

[5]  Hannes Nickisch glm-ie: Generalised Linear Models Inference & Estimation Toolbox , 2012, J. Mach. Learn. Res..

[6]  Lei Ding,et al.  Sparse source imaging in electroencephalography with accurate field modeling , 2008, Human brain mapping.

[7]  Zidong Wang,et al.  Image-Based Quantitative Analysis of Gold Immunochromatographic Strip via Cellular Neural Network Approach , 2014, IEEE Transactions on Medical Imaging.

[8]  Polina Golland,et al.  A distributed spatio-temporal EEG/MEG inverse solver , 2009, NeuroImage.

[9]  Richard N Henson,et al.  A multi-subject, multi-modal human neuroimaging dataset , 2015, Scientific Data.

[10]  A. Gramfort,et al.  Mixed-norm estimates for the M/EEG inverse problem using accelerated gradient methods , 2012, Physics in medicine and biology.

[11]  Stephen P. Boyd,et al.  Proximal Algorithms , 2013, Found. Trends Optim..

[12]  Bin He,et al.  Evaluation of cortical current density imaging methods using intracranial electrocorticograms and functional MRI , 2007, NeuroImage.

[13]  Andreas Schulze-Bonhage,et al.  sLORETA allows reliable distributed source reconstruction based on subdural strip and grid recordings , 2012, Human brain mapping.

[14]  Geertjan Huiskamp,et al.  Regional Differences in the Sensitivity of MEG for Interictal Spikes in Epilepsy , 2010, Brain Topography.

[15]  Julia P. Owen,et al.  Performance evaluation of the Champagne source reconstruction algorithm on simulated and real M/EEG data , 2012, NeuroImage.

[16]  Dezhong Yao,et al.  Lp Norm Iterative Sparse Solution for EEG Source Localization , 2007, IEEE Transactions on Biomedical Engineering.

[17]  Lars Kai Hansen,et al.  Spatio-temporal reconstruction of brain dynamics from EEG with a Markov prior , 2017, NeuroImage.

[18]  関原 謙介,et al.  Adaptive Spatial Filters for Electromagnetic Brain Imaging , 2008 .

[19]  Jen-Chuen Hsieh,et al.  Author's Personal Copy Spatially Sparse Source Cluster Modeling by Compressive Neuromagnetic Tomography , 2022 .

[20]  Karl J. Friston,et al.  A Parametric Empirical Bayesian framework for fMRI‐constrained MEG/EEG source reconstruction , 2010, Human brain mapping.

[21]  Jean Gotman,et al.  Evaluation of EEG localization methods using realistic simulations of interictal spikes , 2006, NeuroImage.

[22]  Stefan Haufe,et al.  Large-scale EEG/MEG source localization with spatial flexibility , 2011, NeuroImage.

[23]  Lei Ding,et al.  Reconstructing cortical current density by exploring sparseness in the transform domain , 2009, Physics in medicine and biology.

[24]  R D Pascual-Marqui,et al.  Standardized low-resolution brain electromagnetic tomography (sLORETA): technical details. , 2002, Methods and findings in experimental and clinical pharmacology.

[25]  Stephen P. Boyd,et al.  Convex Optimization , 2004, Algorithms and Theory of Computation Handbook.

[26]  N. Otsu A threshold selection method from gray level histograms , 1979 .

[27]  Lei Ding,et al.  Reconstructing spatially extended brain sources via enforcing multiple transform sparseness , 2014, NeuroImage.

[28]  P. Green Iteratively reweighted least squares for maximum likelihood estimation , 1984 .

[29]  F Wendling,et al.  Complex patterns of spatially extended generators of epileptic activity: Comparison of source localization methods cMEM and 4-ExSo-MUSIC on high resolution EEG and MEG data , 2016, NeuroImage.

[30]  Robert D. Nowak,et al.  Space–time event sparse penalization for magneto-/electroencephalography , 2009, NeuroImage.

[31]  A. Dale,et al.  Improved Localizadon of Cortical Activity by Combining EEG and MEG with MRI Cortical Surface Reconstruction: A Linear Approach , 1993, Journal of Cognitive Neuroscience.

[32]  Théodore Papadopoulo,et al.  OpenMEEG: opensource software for quasistatic bioelectromagnetics , 2010, Biomedical engineering online.

[33]  Rémi Gribonval,et al.  SISSY: An efficient and automatic algorithm for the analysis of EEG sources based on structured sparsity , 2017, NeuroImage.

[34]  Kensuke Sekihara,et al.  Hierarchical multiscale Bayesian algorithm for robust MEG/EEG source reconstruction , 2018, NeuroImage.

[35]  David P. Wipf,et al.  A unified Bayesian framework for MEG/EEG source imaging , 2009, NeuroImage.

[36]  Kevin P. Murphy,et al.  Machine learning - a probabilistic perspective , 2012, Adaptive computation and machine learning series.

[37]  Christophe Grova,et al.  MEG Source Localization of Spatially Extended Generators of Epileptic Activity: Comparing Entropic and Hierarchical Bayesian Approaches , 2013, PloS one.

[38]  R. Henson,et al.  Electrophysiological and haemodynamic correlates of face perception, recognition and priming. , 2003, Cerebral cortex.

[39]  Bin He,et al.  Electrophysiological Imaging of Brain Activity and Connectivity—Challenges and Opportunities , 2011, IEEE Transactions on Biomedical Engineering.

[40]  R. Ilmoniemi,et al.  Interpreting magnetic fields of the brain: minimum norm estimates , 2006, Medical and Biological Engineering and Computing.

[41]  Wei Wu,et al.  Bayesian Machine Learning: EEG\/MEG signal processing measurements , 2016, IEEE Signal Processing Magazine.

[42]  Fuad E. Alsaadi,et al.  Deep Belief Networks for Quantitative Analysis of a Gold Immunochromatographic Strip , 2016, Cognitive Computation.

[43]  J. Ebersole,et al.  Intracranial EEG Substrates of Scalp EEG Interictal Spikes , 2005, Epilepsia.

[44]  Bin He,et al.  Electrophysiological Source Imaging: A Noninvasive Window to Brain Dynamics. , 2018, Annual review of biomedical engineering.

[45]  Richard M. Leahy,et al.  Brainstorm: A User-Friendly Application for MEG/EEG Analysis , 2011, Comput. Intell. Neurosci..

[46]  Richard M. Leahy,et al.  Electromagnetic brain mapping , 2001, IEEE Signal Process. Mag..

[47]  Bin He,et al.  Imaging brain source extent from EEG/MEG by means of an iteratively reweighted edge sparsity minimization (IRES) strategy , 2016, NeuroImage.

[48]  Wei Wu,et al.  Variation sparse source imaging based on conditional mean for electromagnetic extended sources , 2018, Neurocomputing.

[49]  Matthias W. Seeger,et al.  Large Scale Bayesian Inference and Experimental Design for Sparse Linear Models , 2011, SIAM J. Imaging Sci..

[50]  Hagai Attias,et al.  Probabilistic algorithms for MEG/EEG source reconstruction using temporal basis functions learned from data , 2008, NeuroImage.

[51]  Nelson J. Trujillo-Barreto,et al.  Bayesian M/EEG source reconstruction with spatio-temporal priors , 2008, NeuroImage.

[52]  E. Halgren,et al.  Dynamic Statistical Parametric Mapping Combining fMRI and MEG for High-Resolution Imaging of Cortical Activity , 2000, Neuron.

[53]  Michael X Cohen,et al.  Analyzing Neural Time Series Data: Theory and Practice , 2014 .

[54]  D. Lehmann,et al.  Low resolution electromagnetic tomography: a new method for localizing electrical activity in the brain. , 1994, International journal of psychophysiology : official journal of the International Organization of Psychophysiology.