CoCoCo: a free suite of multiconformational chemical databases for high-throughput virtual screening purposes.
暂无分享,去创建一个
Giuseppe Felice Mangiatordi | Alberto Del Rio | Arménio Jorge Moura Barbosa | Fabiana Caporuscio | G. Mangiatordi | A. Del Rio | A. Barbosa | F. Caporuscio
[1] Lorenz C. Blum,et al. Chemical space as a source for new drugs , 2010 .
[2] F. Lombardo,et al. Experimental and computational approaches to estimate solubility and permeability in drug discovery and development settings. , 2001, Advanced drug delivery reviews.
[3] Giulio Rastelli,et al. A computational workflow for the design of irreversible inhibitors of protein kinases , 2010, J. Comput. Aided Mol. Des..
[4] Paul M. Selzer,et al. The Impact of Tautomer Forms on Pharmacophore-Based Virtual Screening , 2006, J. Chem. Inf. Model..
[5] G. Degliesposti,et al. Binding Estimation after Refinement, a New Automated Procedure for the Refinement and Rescoring of Docked Ligands in Virtual Screening , 2009, Chemical biology & drug design.
[6] Giulio Rastelli,et al. Activity Prediction and Structural Insights of Extracellular Signal‐Regulated Kinase 2 Inhibitors with Molecular Dynamics Simulations , 2009, Chemical biology & drug design.
[7] A. Hopkins,et al. Navigating chemical space for biology and medicine , 2004, Nature.
[8] Tracey Clark,et al. Synthesis and structure based optimization of novel Akt inhibitors. , 2008, Bioorganic & medicinal chemistry letters.
[9] Wei-liang Zhu,et al. Pharmacophore-based virtual screening versus docking-based virtual screening: a benchmark comparison against eight targets , 2009, Acta Pharmacologica Sinica.
[10] Sarath Chandra Janga,et al. Structure and organization of drug-target networks: insights from genomic approaches for drug discovery. , 2009, Molecular bioSystems.
[11] Johannes H. Voigt,et al. Comparison of the NCI Open Database with Seven Large Chemical Structural Databases , 2001, J. Chem. Inf. Comput. Sci..
[12] B. Stockwell. Exploring biology with small organic molecules , 2004, Nature.
[13] Johann Gasteiger,et al. Hash codes for the identification and classification of molecular structure elements , 1994, J. Comput. Chem..
[14] Sorel Muresan,et al. Quantitative assessment of the expanding complementarity between public and commercial databases of bioactive compounds , 2009, J. Cheminformatics.
[15] Patricia Rodriguez-Tomé,et al. MMsINC: a large-scale chemoinformatics database , 2008, Nucleic Acids Res..
[16] Tudor I. Oprea,et al. Is There a Difference between Leads and Drugs? A Historical Perspective , 2001, J. Chem. Inf. Comput. Sci..
[17] Brian K. Shoichet,et al. ZINC - A Free Database of Commercially Available Compounds for Virtual Screening , 2005, J. Chem. Inf. Model..
[18] Thierry Langer,et al. LigandScout: 3-D Pharmacophores Derived from Protein-Bound Ligands and Their Use as Virtual Screening Filters , 2005, J. Chem. Inf. Model..
[19] Wolf-Dietrich Ihlenfeldt,et al. Computation and management of chemical properties in CACTVS: An extensible networked approach toward modularity and compatibility , 1994, J. Chem. Inf. Comput. Sci..
[20] Lorenz C. Blum,et al. 970 million druglike small molecules for virtual screening in the chemical universe database GDB-13. , 2009, Journal of the American Chemical Society.
[21] Marc C. Nicklaus,et al. Combining docking with pharmacophore filtering for improved virtual screening , 2009, J. Cheminformatics.
[22] J. Alvarez. High-throughput docking as a source of novel drug leads. , 2004, Current opinion in chemical biology.
[23] Frank Oellien,et al. Enhanced CACTVS Browser of the Open NCI Database , 2002, J. Chem. Inf. Comput. Sci..
[24] Brian K. Shoichet,et al. Virtual screening of chemical libraries , 2004, Nature.
[25] Giulio Rastelli,et al. Fast and accurate predictions of binding free energies using MM‐PBSA and MM‐GBSA , 2009, J. Comput. Chem..
[26] Yvonne C. Martin,et al. Let’s not forget tautomers , 2009, J. Comput. Aided Mol. Des..