The R2R3 MYB Transcription Factor DUO1 Activates a Male Germline-Specific Regulon Essential for Sperm Cell Differentiation in Arabidopsis[C][W]

The MYB protein DUO1 is a key determinant of sperm cell development in Arabidopsis. This study identifies a diverse range of downstream genes regulated by DUO1 and provides molecular insight into the regulatory networks associated with the differentiation of precursor germ cells into functional sperm cells. The male germline in flowering plants arises through asymmetric division of a haploid microspore. The resulting germ cell undergoes mitotic division and specialization to produce the two sperm cells required for double fertilization. The male germline-specific R2R3 MYB transcription factor DUO1 POLLEN1 (DUO1) plays an essential role in sperm cell specification by activating a germline-specific differentiation program. Here, we show that ectopic expression of DUO1 upregulates a significant number (~63) of germline-specific or enriched genes, including those required for fertilization. We validated 14 previously unknown DUO1 target genes by demonstrating DUO1-dependent promoter activity in the male germline. DUO1 is shown to directly regulate its target promoters through binding to canonical MYB sites, suggesting that the DUO1 target genes validated thus far are likely to be direct targets. This work advances knowledge of the DUO1 regulon that encompasses genes with a range of cellular functions, including transcription, protein fate, signaling, and transport. Thus, the DUO1 regulon has a major role in shaping the germline transcriptome and functions to commit progenitor germ cells to sperm cell differentiation.

[1]  F. Berger,et al.  Distinct Dynamics of HISTONE3 Variants between the Two Fertilization Products in Plants , 2007, Current Biology.

[2]  Michael Borg,et al.  A Plant Germline-Specific Integrator of Sperm Specification and Cell Cycle Progression , 2009, PLoS genetics.

[3]  G. N. Drews,et al.  MYB98 Positively Regulates a Battery of Synergid-Expressed Genes Encoding Filiform Apparatus–Localized Proteins[W] , 2007, The Plant Cell Online.

[4]  W. Houry,et al.  AAA+ proteins: diversity in function, similarity in structure. , 2008, Biochemical Society transactions.

[5]  H. Saedler,et al.  MADS-complexes regulate transcriptome dynamics during pollen maturation , 2007, Genome Biology.

[6]  G. Crooks,et al.  WebLogo: a sequence logo generator. , 2004, Genome research.

[7]  Y. Jan,et al.  A lethal giant kinase in cell polarity , 2003, Nature Cell Biology.

[8]  A. Forsmark Functional characterisation of the yeast tumour suppressor homologue Sro7p , 2009 .

[9]  P. Doerner,et al.  Arabidopsis DUO POLLEN3 Is a Key Regulator of Male Germline Development and Embryogenesis[C][W] , 2009, The Plant Cell Online.

[10]  E. Reddy,et al.  Role of tryptophan repeats and flanking amino acids in Myb-DNA interactions. , 1990, Proceedings of the National Academy of Sciences of the United States of America.

[11]  H. Saedler,et al.  MIKC* MADS-Protein Complexes Bind Motifs Enriched in the Proximal Region of Late Pollen-Specific Arabidopsis Promoters[W] , 2006, Plant Physiology.

[12]  A. Chaboud,et al.  Sperm cells of Zea mays have a complex complement of mRNAs. , 2003, The Plant journal : for cell and molecular biology.

[13]  T. Kuroiwa,et al.  GENERATIVE CELL SPECIFIC 1 is essential for angiosperm fertilization , 2006, Nature Cell Biology.

[14]  Elliot M. Meyerowitz,et al.  Role of SUPERMAN in maintaining Arabidopsis floral whorl boundaries , 1995, Nature.

[15]  K. Alleva,et al.  TIP5;1 is an aquaporin specifically targeted to pollen mitochondria and is probably involved in nitrogen remobilization in Arabidopsis thaliana. , 2010, The Plant journal : for cell and molecular biology.

[16]  Mark Johnson,et al.  Arabidopsis HAP2 (GCS1) is a sperm-specific gene required for pollen tube guidance and fertilization , 2006, Development.

[17]  H. Takatsuji,et al.  Zinc-finger proteins: the classical zinc finger emerges in contemporary plant science , 1999, Plant Molecular Biology.

[18]  Tobias Dezulian,et al.  Sequence and expression differences underlie functional specialization of Arabidopsis microRNAs miR159 and miR319. , 2007, Developmental cell.

[19]  G. Stacey,et al.  The Arabidopsis AtOPT3 Protein Functions in Metal Homeostasis and Movement of Iron to Developing Seeds1[W][OA] , 2007, Plant Physiology.

[20]  S. Goff,et al.  C1- and R-dependent expression of the maize Bz1 gene requires sequences with homology to mammalian myb and myc binding sites. , 1991, The Plant cell.

[21]  S. Clough,et al.  Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana. , 1998, The Plant journal : for cell and molecular biology.

[22]  D. Bilder,et al.  Cell polarity: Squaring the circle , 2001, Current Biology.

[23]  Heiko Schoof,et al.  Conservation, diversification and expansion of C2H2 zinc finger proteins in the Arabidopsis thaliana genome , 2004, BMC Genomics.

[24]  D. Twell,et al.  Male Germ Line Development in Arabidopsis. duo pollen Mutants Reveal Gametophytic Regulators of Generative Cell Cycle Progression1[w] , 2005, Plant Physiology.

[25]  J. Reeve,et al.  Archaeal chromatin proteins: different structures but common function? , 2005, Current opinion in microbiology.

[26]  D. Weigel,et al.  SUPERMAN, a regulator of floral homeotic genes in Arabidopsis. , 1992, Development.

[27]  M. O’Brien,et al.  The ScFRK2 MAP kinase kinase kinase from Solanum chacoense affects pollen development and viability , 2007, Planta.

[28]  Dirk Inzé,et al.  GATEWAY vectors for Agrobacterium-mediated plant transformation. , 2002, Trends in plant science.

[29]  K. Alleva,et al.  AtTIP1;3 and AtTIP5;1, the only highly expressed Arabidopsis pollen‐specific aquaporins, transport water and urea , 2008, FEBS letters.

[30]  M. F. White,et al.  The Interaction of Alba, a Conserved Archaeal Chromatin Protein, with Sir2 and Its Regulation by Acetylation , 2002, Science.

[31]  P. Bhalla,et al.  Transcriptional activity of male gamete-specific histone gcH3 promoter in sperm cells of Lilium longiflorum. , 2005, Plant & cell physiology.

[32]  H. Nam,et al.  Control of plant germline proliferation by SCFFBL17 degradation of cell cycle inhibitors , 2008, Nature.

[33]  C. Maurel,et al.  Expression and inhibition of aquaporins in germinating Arabidopsis seeds. , 2006, Plant & cell physiology.

[34]  Da-bing Zhang,et al.  From Arabidopsis to rice: pathways in pollen development. , 2009, Journal of experimental botany.

[35]  R. Rodriguez,et al.  A noncommercial dual luciferase enzyme assay system for reporter gene analysis. , 2000, Analytical biochemistry.

[36]  Jacques van Helden,et al.  Regulatory Sequence Analysis Tools , 2003, Nucleic Acids Res..

[37]  J. C. Gaiser,et al.  The Arabidopsis SUPERMAN Gene Mediates Asymmetric Growth of the Outer Integument of Ovules. , 1995, The Plant cell.

[38]  I. Hwang,et al.  A Novel Family of Cys-Rich Membrane Proteins Mediates Cadmium Resistance in Arabidopsis1 , 2004, Plant Physiology.

[39]  A. Sakamoto,et al.  Seven zinc-finger transcription factors are expressed sequentially during the development of anthers in petunia. , 1998, The Plant journal : for cell and molecular biology.

[40]  E. Grotewold,et al.  The myb-homologous P gene controls phlobaphene pigmentation in maize floral organs by directly activating a flavonoid biosynthetic gene subset , 1994, Cell.

[41]  M. Lubkowitz The OPT family functions in long-distance peptide and metal transport in plants. , 2006, Genetic engineering.

[42]  Hong Xue,et al.  An Abundant DNA Binding Protein from the Hyperthermophilic Archaeon Sulfolobus shibatae Affects DNA Supercoiling in a Temperature-Dependent Fashion , 2000, Journal of bacteriology.

[43]  Ryan E. Mills,et al.  Classical Nuclear Localization Signals: Definition, Function, and Interaction with Importin α* , 2007, Journal of Biological Chemistry.

[44]  J. Feijó,et al.  Comparative Transcriptomics of Arabidopsis Sperm Cells1[C][W] , 2008, Plant Physiology.

[45]  R. Steele,et al.  Evolutionary History of the HAP2/GCS1 Gene and Sexual Reproduction in Metazoans , 2009, PloS one.

[46]  Brad T. Sherman,et al.  Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources , 2008, Nature Protocols.

[47]  Juan Zhang,et al.  Overexpression of the tonoplast aquaporin AtTIP5;1 conferred tolerance to boron toxicity in Arabidopsis. , 2010, Journal of genetics and genomics = Yi chuan xue bao.

[48]  Youngsook Lee,et al.  Arabidopsis PCR2 Is a Zinc Exporter Involved in Both Zinc Extrusion and Long-Distance Zinc Transport[W] , 2010, Plant Cell.

[49]  R. Solano,et al.  Dual DNA binding specificity of a petal epidermis‐specific MYB transcription factor (MYB.Ph3) from Petunia hybrida. , 1995, The EMBO journal.

[50]  P. Hilson,et al.  Modular cloning in plant cells. , 2005, Trends in plant science.

[51]  A. Chaboud,et al.  A Novel Class of MYB Factors Controls Sperm-Cell Formation in Plants , 2005, Current Biology.

[52]  D. Twell,et al.  The Arabidopsis thaliana gametophytic mutation gemini pollen1 disrupts microspore polarity, division asymmetry and pollen cell fate. , 1998, Development.

[53]  K. Forrest,et al.  Major intrinsic proteins (MIPs) in plants: a complex gene family with major impacts on plant phenotype , 2007, Functional & Integrative Genomics.

[54]  Jacques van Helden,et al.  RSAT: regulatory sequence analysis tools , 2008, Nucleic Acids Res..

[55]  C. Gasser,et al.  SUPERMAN attenuates positive INNER NO OUTER autoregulation to maintain polar development of Arabidopsis ovule outer integuments. , 2002, Development.

[56]  T. Kuroiwa,et al.  Male Fertility of Malaria Parasites Is Determined by GCS1, a Plant-Type Reproduction Factor , 2008, Current Biology.

[57]  H. Takatsuji,et al.  Zinc-finger transcription factors in plants , 1998, Cellular and Molecular Life Sciences CMLS.

[58]  S. Tapscott,et al.  Loss of cell polarity causes severe brain dysplasia in Lgl1 knockout mice. , 2004, Genes & development.

[59]  H. Richardson,et al.  Dlg, Scribble and Lgl in cell polarity, cell proliferation and cancer. , 2003, BioEssays : news and reviews in molecular, cellular and developmental biology.

[60]  A. Nantel,et al.  Loss of ovule identity induced by overexpression of the fertilization-related kinase 2 (ScFRK2), a MAPKKK from Solanum chacoense. , 2006, Journal of experimental botany.

[61]  F. Berger,et al.  Double fertilization - caught in the act. , 2008, Trends in plant science.

[62]  R. Kalla,et al.  Gibberellin-regulated expression of a myb gene in barley aleurone cells: evidence for Myb transactivation of a high-pI alpha-amylase gene promoter. , 1995, The Plant cell.

[63]  S. McCormick,et al.  Green Sperm. Identification of Male Gamete Promoters in Arabidopsis1[w] , 2005, Plant Physiology.

[64]  P. Bhalla,et al.  Expressed sequence tag analysis of Lilium longiflorum generative cells. , 2006, Plant & cell physiology.

[65]  C. Hawes,et al.  Rapid, transient expression of fluorescent fusion proteins in tobacco plants and generation of stably transformed plants , 2006, Nature Protocols.

[66]  N. Grishin,et al.  The conserved plant sterility gene HAP2 functions after attachment of fusogenic membranes in Chlamydomonas and Plasmodium gametes. , 2008, Genes & development.

[67]  K. Baek The first oncogene in Drosophila melanogaster. , 1999, Mutation research.

[68]  Mark Johnson,et al.  Is HAP2-GCS1 an ancestral gamete fusogen? , 2010, Trends in cell biology.