The complete genome sequence of the dominant Sinorhizobium meliloti field isolate SM11 extends the S. meliloti pan-genome.

[1]  Alexander Goesmann,et al.  EDGAR: A software framework for the comparative analysis of prokaryotic genomes , 2009, BMC Bioinformatics.

[2]  P. Reeves,et al.  Membrane topology of the Salmonella enterica serovar Typhimurium Group B O-antigen translocase Wzx. , 2008, FEMS microbiology letters.

[3]  M. F. Del Papa,et al.  Conjugal properties of the Sinorhizobium meliloti plasmid mobilome. , 2008, FEMS microbiology ecology.

[4]  A. Goesmann,et al.  Comparative genomic hybridisation and ultrafast pyrosequencing revealed remarkable differences between the Sinorhizobium meliloti genomes of the model strain Rm1021 and the field isolate SM11. , 2008, Journal of biotechnology.

[5]  L. Delbaere,et al.  Structural, Functional and Calorimetric Investigation of MosA, a Dihydrodipicolinate Synthase from Sinorhizobium meliloti L5–30, does not Support Involvement in Rhizopine Biosynthesis , 2008, Chembiochem : a European journal of chemical biology.

[6]  J. Schmid,et al.  The genome of Xanthomonas campestris pv. campestris B100 and its use for the reconstruction of metabolic pathways involved in xanthan biosynthesis. , 2008, Journal of biotechnology.

[7]  A. Pühler,et al.  Prevalence of pSmeSM11a-like plasmids in indigenous Sinorhizobium meliloti strains isolated in the course of a field release experiment with genetically modified S. meliloti strains. , 2008, FEMS microbiology ecology.

[8]  Kathryn M. Jones,et al.  How rhizobial symbionts invade plants: the Sinorhizobium–Medicago model , 2007, Nature Reviews Microbiology.

[9]  A. Pühler,et al.  Sequence analysis of the 181-kb accessory plasmid pSmeSM11b, isolated from a dominant Sinorhizobium meliloti strain identified during a long-term field release experiment. , 2007, FEMS microbiology letters.

[10]  C. Whitfield,et al.  The 3D structure of a periplasm-spanning platform required for assembly of group 1 capsular polysaccharides in Escherichia coli , 2007, Proceedings of the National Academy of Sciences.

[11]  F. Martínez-Abarca,et al.  Dispersion of the RmInt1 group II intron in the Sinorhizobium meliloti genome upon acquisition by conjugative transfer , 2006, Nucleic acids research.

[12]  Long-Term Field Release of Bioluminescent Sinorhizobium meliloti Strains to Assess the Influence of a recA Mutation on the Strains' Survival , 2006, Microbial Ecology.

[13]  C. Whitfield Biosynthesis and assembly of capsular polysaccharides in Escherichia coli. , 2006, Annual review of biochemistry.

[14]  A. Pühler,et al.  Sequence Analysis of the 144-Kilobase Accessory Plasmid pSmeSM11a, Isolated from a Dominant Sinorhizobium meliloti Strain Identified during a Long-Term Field Release Experiment , 2006, Applied and Environmental Microbiology.

[15]  Julio Collado-Vides,et al.  The partitioned Rhizobium etli genome: genetic and metabolic redundancy in seven interacting replicons. , 2006, Proceedings of the National Academy of Sciences of the United States of America.

[16]  C. Landry,et al.  Large-scale genetic variation of the symbiosis-required megaplasmid pSymA revealed by comparative genomic analysis of Sinorhizobium meliloti natural strains , 2005, BMC Genomics.

[17]  Jianping Xu,et al.  Novel DNA Sequences from Natural Strains of the Nitrogen-Fixing Symbiotic Bacterium Sinorhizobium meliloti , 2005, Applied and Environmental Microbiology.

[18]  James R. Knight,et al.  Genome sequencing in microfabricated high-density picolitre reactors , 2005, Nature.

[19]  E. Cascales,et al.  Biogenesis, architecture, and function of bacterial type IV secretion systems. , 2005, Annual review of microbiology.

[20]  Matthew Berriman,et al.  ACT: the Artemis comparison tool , 2005, Bioinform..

[21]  Daniela Bartels,et al.  BACCardI-a tool for the validation of genomic assemblies, assisting genome finishing and intergenome comparison , 2005, Bioinform..

[22]  E. Cascales,et al.  Structural and dynamic properties of bacterial Type IV secretion systems (Review) , 2005, Molecular membrane biology.

[23]  Trevor C. Charles,et al.  Expression of an Exogenous 1-Aminocyclopropane-1-Carboxylate Deaminase Gene in Sinorhizobium meliloti Increases Its Ability To Nodulate Alfalfa , 2004, Applied and Environmental Microbiology.

[24]  I. Kuntz,et al.  Inhibition of Mycobacterium tuberculosis AhpD, an Element of the Peroxiredoxin Defense against Oxidative Stress , 2004, Antimicrobial Agents and Chemotherapy.

[25]  D. R. Palmer,et al.  MosA, a protein implicated in rhizopine biosynthesis in Sinorhizobium meliloti L5-30, is a dihydrodipicolinate synthase. , 2004, Journal of molecular biology.

[26]  E. Kondorosi,et al.  Cell cycle regulation in the course of nodule organogenesis in Medicago , 2000, Plant Molecular Biology.

[27]  P. Papp,et al.  The bacterial attachment site of the temperate Rhizobium phage 16-3 overlaps the 3′ end of a putative proline tRNA gene , 1993, Molecular and General Genetics MGG.

[28]  B Marshall,et al.  Gene Ontology Consortium: The Gene Ontology (GO) database and informatics resource , 2004, Nucleic Acids Res..

[29]  Woojun Park,et al.  Polaromonas naphthalenivorans sp. nov., a naphthalene-degrading bacterium from naphthalene-contaminated sediment. , 2004, International journal of systematic and evolutionary microbiology.

[30]  B. Glick,et al.  Prevalence of 1-aminocyclopropane-1-carboxylate deaminase in Rhizobium spp. , 2004, Antonie van Leeuwenhoek.

[31]  L. Orosz,et al.  The detailed physical map of the temperate phage 16-3 of Rhizobium meliloti 41 , 2004, Molecular and General Genetics MGG.

[32]  C. Claudel-Renard,et al.  Enzyme-specific profiles for genome annotation: PRIAM. , 2003, Nucleic acids research.

[33]  E. Cascales,et al.  The versatile bacterial type IV secretion systems , 2003, Nature Reviews Microbiology.

[34]  Darren A. Natale,et al.  The COG database: an updated version includes eukaryotes , 2003, BMC Bioinformatics.

[35]  Bernard R. Glick,et al.  Rhizobium leguminosarum Biovar viciae 1-Aminocyclopropane-1-Carboxylate Deaminase Promotes Nodulation of Pea Plants , 2003, Applied and Environmental Microbiology.

[36]  L. Major,et al.  A structural perspective on the enzymes that convert dTDP-d-glucose into dTDP-l-rhamnose. , 2003, Biochemical Society transactions.

[37]  R. Giegerich,et al.  GenDB--an open source genome annotation system for prokaryote genomes. , 2003, Nucleic acids research.

[38]  M. Minnick,et al.  Differential expression of the invasion-associated locus B (ialB) gene of Bartonella bacilliformis in response to environmental cues. , 2003, Microbial pathogenesis.

[39]  Alfred Pühler,et al.  Genomics insights into symbiotic nitrogen fixation. , 2003, Current opinion in biotechnology.

[40]  E. Biondi,et al.  Genetic relationship of Sinorhizobium meliloti and Sinorhizobium medicae strains isolated from Caucasian region. , 2003, FEMS microbiology letters.

[41]  R. Webby,et al.  Comparative Sequence Analysis of the Symbiosis Island of Mesorhizobium loti Strain R7A , 2002, Journal of bacteriology.

[42]  Adam C Resnick,et al.  UDP-glucuronate Decarboxylase, a Key Enzyme in Proteoglycan Synthesis , 2002, The Journal of Biological Chemistry.

[43]  T. Shiba,et al.  Genes from Pseudomonas sp. Strain BS Involved in the Conversion of l-2-Amino-Δ2-Thiazolin-4-Carbonic Acid to l-Cysteine , 2002, Applied and Environmental Microbiology.

[44]  T. Ohmachi,et al.  Identification, Cloning, and Sequencing of the Genes Involved in the Conversion of D,L-2-Amino-Δ2-Thiazoline-4-Carboxylic Acid to … , 2002 .

[45]  Steven Salzberg,et al.  A probabilistic method for identifying start codons in bacterial genomes , 2001, Bioinform..

[46]  R. W. Davis,et al.  Nucleotide sequence and predicted functions of the entire Sinorhizobium meliloti pSymA megaplasmid , 2001, Proceedings of the National Academy of Sciences of the United States of America.

[47]  A. Goffeau,et al.  Analysis of the chromosome sequence of the legume symbiont Sinorhizobium meliloti strain 1021 , 2001, Proceedings of the National Academy of Sciences of the United States of America.

[48]  Kim Wong,et al.  The complete sequence of the 1,683-kb pSymB megaplasmid from the N2-fixing endosymbiont Sinorhizobium meliloti , 2001, Proceedings of the National Academy of Sciences of the United States of America.

[49]  Ronald W. Davis,et al.  The Composite Genome of the Legume Symbiont Sinorhizobium meliloti , 2001, Science.

[50]  S. Salzberg,et al.  Evidence for symmetric chromosomal inversions around the replication origin in bacteria , 2000, Genome Biology.

[51]  S. Negoro Biodegradation of nylon oligomers , 2000, Applied Microbiology and Biotechnology.

[52]  E. Willery,et al.  Novel Topological Features of FhaC, the Outer Membrane Transporter Involved in the Secretion of the Bordetella pertussis Filamentous Hemagglutinin* , 2000, The Journal of Biological Chemistry.

[53]  I. Oresnik,et al.  Megaplasmid pRme2011a of Sinorhizobium meliloti Is Not Required for Viability , 2000, Journal of bacteriology.

[54]  J. Cirillo,et al.  Identification of novel loci involved in entry by Legionella pneumophila. , 2000, Microbiology.

[55]  E. Willery,et al.  Molecular characterization of Bordetella bronchiseptica filamentous haemagglutinin and its secretion machinery. , 2000, Microbiology.

[56]  Cloning and Identification of Conjugative Transfer Origins in the Rhizobium meliloti Genome , 1998, Journal of bacteriology.

[57]  R. Morona,et al.  Overexpression and topology of the Shigella flexneri O‐antigen polymerase (Rfc/Wzy) , 1998, Molecular microbiology.

[58]  C. Vernotte,et al.  Resistance to nitrophenolic herbicides and metronidazole in the cyanobacterium Synechocystis sp. PCC 6803 as a result of the inactivation of a nitroreductase‐like protein encoded by drgA gene , 1998, FEBS letters.

[59]  P. Green,et al.  Consed: a graphical tool for sequence finishing. , 1998, Genome research.

[60]  K. Niehaus,et al.  The role of microbial surface polysaccharides in the Rhizobium-legume interaction. , 1998, Sub-cellular biochemistry.

[61]  Thomas L. Madden,et al.  Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. , 1997, Nucleic acids research.

[62]  S. Eddy,et al.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. , 1997, Nucleic acids research.

[63]  A. Pühler,et al.  The 32-kilobase exp gene cluster of Rhizobium meliloti directing the biosynthesis of galactoglucan: genetic organization and properties of the encoded gene products , 1997, Journal of bacteriology.

[64]  D. Maskell,et al.  Bacterial polysaccharide synthesis and gene nomenclature. , 1996, Trends in microbiology.

[65]  J. Borneman,et al.  A newly discovered gene, tfuA, involved in the production of the ribosomally synthesized peptide antibiotic trifolitoxin , 1996, Journal of bacteriology.

[66]  M. McNeil,et al.  Galactofuranose biosynthesis in Escherichia coli K-12: identification and cloning of UDP-galactopyranose mutase , 1996, Journal of bacteriology.

[67]  Peter M. Gresshoff,et al.  Biology of plant-microbe interactions , 1996 .

[68]  T. Yomo,et al.  A plasmid encoding enzymes for nylon oligomer degradation: nucleotide sequence and analysis of pOAD2. , 1995, Microbiology.

[69]  J. Mercado-Blanco,et al.  Melanin production by Rhizobium meliloti GR4 is linked to nonsymbiotic plasmid pRmeGR4b: cloning, sequencing, and expression of the tyrosinase gene mepA , 1993, Journal of bacteriology.

[70]  P. Murphy,et al.  The Rhizobium meliloti rhizopine mos locus is a mosaic structure facilitating its symbiotic regulation , 1993, Journal of bacteriology.

[71]  T. L. Reuber,et al.  Biosynthesis of succinoglycan, a symbiotically important exopolysaccharide of Rhizobium meliloti , 1993, Cell.

[72]  T. Yomo,et al.  No stop codons in the antisense strands of the genes for nylon oligomer degradation. , 1992, Proceedings of the National Academy of Sciences of the United States of America.

[73]  Trevor C. Charles,et al.  Analysis of a 1600-kilobase Rhizobium meliloti megaplasmid using defined deletions generated in vivo. , 1991, Genetics.

[74]  H. Okada,et al.  High homology between 6-aminohexanoate-cyclic-dimer hydrolases of Flavobacterium and Pseudomonas strains , 1989, Journal of bacteriology.

[75]  E. Jacobson,et al.  UDP Glucuronate Decarboxylase and Synthesis of Capsular Polysaccharide in Cryptococcus neoformans , 1982, Journal of bacteriology.