ConSite: web-based prediction of regulatory elements using cross-species comparison
暂无分享,去创建一个
[1] T A Gray,et al. Phylogenetic footprinting reveals a nuclear protein which binds to silencer sequences in the human gamma and epsilon globin genes , 1992, Molecular and cellular biology.
[2] Gary D. Stormo,et al. DNA binding sites: representation and discovery , 2000, Bioinform..
[3] C. Lawrence,et al. Human-mouse genome comparisons to locate regulatory sites , 2000, Nature Genetics.
[4] M. Goodman,et al. Embryonic epsilon and gamma globin genes of a prosimian primate (Galago crassicaudatus). Nucleotide and amino acid sequences, developmental regulation and phylogenetic footprints. , 1988, Journal of molecular biology.
[5] L. Pachter,et al. rVista for comparative sequence-based discovery of functional transcription factor binding sites. , 2002, Genome research.
[6] Terrence S. Furey,et al. The UCSC Genome Browser Database , 2003, Nucleic Acids Res..
[7] L. Kedes,et al. Regulation of the human cardiac/slow-twitch troponin C gene by multiple, cooperative, cell-type-specific, and MyoD-responsive elements. , 1993, Molecular and cellular biology.
[8] M. Goodman,et al. Embryonic ε and γ globin genes of a prosimian primate (Galago crassicaudatus): Nucleotide and amino acid sequences, developmental regulation and phylogenetic footprints , 1988 .
[9] Alistair G. Rust,et al. Ensembl 2002: accommodating comparative genomics , 2003, Nucleic Acids Res..
[10] C. Ferraz,et al. Comparative genomics of the SOX9 region in human and Fugu rubripes: conservation of short regulatory sequence elements within large intergenic regions. , 2001, Genomics.
[11] J. Fickett. Copyright � 1996, American Society for Microbiology Quantitative Discrimination of MEF2 Sites , 1995 .
[12] W. Wasserman,et al. GeneLynx: a gene-centric portal to the human genome. , 2001, Genome research.
[13] A. Sandelin,et al. Identification of conserved regulatory elements by comparative genome analysis , 2003, Journal of biology.
[14] Wyeth W. Wasserman,et al. In silico identification of metazoan transcriptional regulatory regions , 2003, Naturwissenschaften.
[15] John C. Schug,et al. Tess: transcription element search software on the www , 1977 .
[16] Wyeth W. Wasserman,et al. JASPAR: an open-access database for eukaryotic transcription factor binding profiles , 2004, Nucleic Acids Res..
[17] Wyeth W. Wasserman,et al. TFBS: Computational framework for transcription factor binding site analysis , 2002, Bioinform..
[18] M. Blumenfeld,et al. Analysis of the distribution of binding sites for a tissue-specific transcription factor in the vertebrate genome. , 1997, Journal of molecular biology.
[19] S. Brenner,et al. Detecting conserved regulatory elements with the model genome of the Japanese puffer fish, Fugu rubripes. , 1995, Proceedings of the National Academy of Sciences of the United States of America.