Contractile tail machines of bacteriophages.

Bacteriophages with contractile tails epitomize the concepts of "virus" and "phage" for many because the tails of these phages undergo a large conformational change - resembling the action of a syringe - upon the attachment to the host cell. The contractile tails belong to the recently recognized class of "contractile systems," which includes phage tails, their close relatives R-type pyocins, the bacterial type VI secretion system, and the virulence cassette of Photorhabdus. Their function is to deliver large proteins and/or DNA into the cytoplasm of a bacterial or eukaryotic cell. The structure of the core components of all contractile tail-like systems is conserved, but the corresponding genes have diverged to such a degree that the common ancestry can no longer be easily detected at the level of amino acid sequence. At present, it is unclear, whether the contractile systems originated in bacteria or in phages. This chapter describes the structure and function of phage contractile tails and compares them with other phage tails and with other known contractile systems.

[1]  F. Eiserling,et al.  Studies on the structure, protein composition and aseembly of the neck of bacteriophage T4. , 1977, Journal of molecular biology.

[2]  Steven R. Williams,et al.  Retargeting R-Type Pyocins To Generate Novel Bactericidal Protein Complexes , 2008, Applied and Environmental Microbiology.

[3]  M. Piuri,et al.  A peptidoglycan hydrolase motif within the mycobacteriophage TM4 tape measure protein promotes efficient infection of stationary phase cells , 2006, Molecular microbiology.

[4]  J. King,et al.  Genetic control of bacteriophage T4 baseplate morphogenesis. I. Sequential assembly of the major precursor, in vivo and in vitro. , 1975, Journal of molecular biology.

[5]  Johannes Söding,et al.  Protein homology detection by HMM?CHMM comparison , 2005, Bioinform..

[6]  Michael G Rossmann,et al.  The tail sheath structure of bacteriophage T4: a molecular machine for infecting bacteria , 2009, The EMBO journal.

[7]  J. Otero,et al.  Structure of the bacteriophage T4 long tail fiber receptor-binding tip , 2010, Proceedings of the National Academy of Sciences.

[8]  M. Hurst,et al.  Isolation and characterization of the Serratia entomophila antifeeding prophage. , 2007, FEMS microbiology letters.

[9]  H. Krisch,et al.  Isolation and genomic characterization of the first phage infecting Iodobacteria: ϕPLPE, a myovirus having a novel set of features. , 2009, Environmental microbiology reports.

[10]  M F Moody,et al.  Structure of the sheath of bacteriophage T4. I. Structure of the contracted sheath and polysheath. , 1967, Journal of molecular biology.

[11]  G. Sciara,et al.  Structure of lactococcal phage p2 baseplate and its mechanism of activation , 2010, Proceedings of the National Academy of Sciences.

[12]  W. Nelson,et al.  Identification of a conserved bacterial protein secretion system in Vibrio cholerae using the Dictyostelium host model system , 2006, Proceedings of the National Academy of Sciences of the United States of America.

[13]  Stephen Lory,et al.  A Virulence Locus of Pseudomonas aeruginosa Encodes a Protein Secretion Apparatus , 2006, Science.

[14]  Fumio Arisaka,et al.  Three-dimensional structure of bacteriophage T4 baseplate , 2003, Nature Structural Biology.

[15]  F. Arisaka,et al.  Reassembly of the bacteriophage T4 tail from the core-baseplate and the monomeric sheath protein P18: a co-operative association process. , 1979, Journal of molecular biology.

[16]  E. Yamashita,et al.  Structure of the central hub of bacteriophage Mu baseplate determined by X-ray crystallography of gp44. , 2005, Journal of molecular biology.

[17]  M. Rossmann,et al.  Morphogenesis of the T4 tail and tail fibers , 2010, Virology Journal.

[18]  Fumio Arisaka,et al.  Structure of the cell-puncturing device of bacteriophage T4 , 2002, Nature.

[19]  Michael G. Rossmann,et al.  Three-Dimensional Rearrangement of Proteins in the Tail of Bacteriophage T4 on Infection of Its Host , 2004, Cell.

[20]  F. Repoila,et al.  Bacteriophage T4 host range is expanded by duplications of a small domain of the tail fiber adhesin. , 1996, Journal of molecular biology.

[21]  J. King,et al.  Genetic control of bacteriophage T4 baseplate morphogenesis. III. Formation of the central plug and overall assembly pathway. , 1975, Journal of molecular biology.

[22]  R. ffrench-Constant,et al.  Photorhabdus Virulence Cassettes Confer Injectable Insecticidal Activity against the Wax Moth , 2006, Journal of bacteriology.

[23]  Rekha Seshadri,et al.  Bacterial Genomics and Pathogen Evolution , 2006, Cell.

[24]  L. Simon,et al.  The infection of Escherichia coli by T2 and T4 bacteriophages as seen in the electron microscope. II. Structure and function of the baseplate. , 1967, Virology.

[25]  J. King,et al.  Assembly of the tail of bacteriophage T4. , 1975, Journal of supramolecular structure.

[26]  Liam J. McGuffin,et al.  The PSIPRED protein structure prediction server , 2000, Bioinform..

[27]  F. Eiserling,et al.  Tail length determination in bacteriophage T4. , 1994, Virology.

[28]  J. Tschopp,et al.  Purification, characterization and reassembly of the bacteriophage T4D tail sheath protein P18. , 1979, Journal of molecular biology.

[29]  Sophie Bleves,et al.  The bacterial type VI secretion machine: yet another player for protein transport across membranes. , 2008, Microbiology.

[30]  Fumio Arisaka,et al.  The bacteriophage T4 DNA injection machine. , 2004, Current opinion in structural biology.

[31]  J. King Assembly of the tau of bacteriophage T4 , 1968 .

[32]  H. Ackermann,et al.  Bacteriophage observations and evolution. , 2003, Research in microbiology.

[33]  Michael G Rossmann,et al.  Molecular architecture of the prolate head of bacteriophage T4. , 2004, Proceedings of the National Academy of Sciences of the United States of America.

[34]  Fumio Arisaka,et al.  The tail structure of bacteriophage T4 and its mechanism of contraction , 2005, Nature Structural &Molecular Biology.

[35]  P. Leiman,et al.  The structures of bacteriophages K1E and K1-5 explain processive degradation of polysaccharide capsules and evolution of new host specificities. , 2007, Journal of molecular biology.

[36]  M. F. Moody Sheath of bacteriophage T4. 3. Contraction mechanism deduced from partially contracted sheaths. , 1973, Journal of molecular biology.

[37]  J. King,et al.  Genetic control of bacteriophage T4 baseplate morphogenesis. II. Mutants unable to form the central part of the baseplate. , 1975, Journal of molecular biology.

[38]  S. Miller,et al.  Crystal structure of a heat and protease-stable part of the bacteriophage T4 short tail fibre. , 2001, Journal of molecular biology.

[39]  L. Simon,et al.  The infection of Escherichia coli by T2 and T4 bacteriophages as seen in the electron microscope. I. Attachment and penetration. , 1967, Virology.

[40]  T. Yamamoto Presence of Rhapidosomes in Various Species of Bacteria and Their Morphological Characteristics , 1967, Journal of bacteriology.

[41]  H. Mori,et al.  The R‐type pyocin of Pseudomonas aeruginosa is related to P2 phage, and the F‐type is related to lambda phage , 2000, Molecular microbiology.

[42]  A. Records The type VI secretion system: a multipurpose delivery system with a phage-like machinery. , 2011, Molecular plant-microbe interactions : MPMI.

[43]  E. Koonin,et al.  Bacteriophage P2: genes involved in baseplate assembly. , 1995, Virology.

[44]  R. Seckler,et al.  Structure of the Receptor-Binding Protein of Bacteriophage Det7: a Podoviral Tail Spike in a Myovirus , 2007, Journal of Virology.

[45]  J. Drake,et al.  Molecular Biology of Bacteriophage T4 , 1994 .

[46]  T. Glare,et al.  Cloning Serratia entomophila Antifeeding Genes—a Putative Defective Prophage Active against the Grass Grub Costelytra zealandica , 2004, Journal of bacteriology.

[47]  Steven R. Williams,et al.  An Engineered R-Type Pyocin Is a Highly Specific and Sensitive Bactericidal Agent for the Food-Borne Pathogen Escherichia coli O157:H7 , 2009, Antimicrobial Agents and Chemotherapy.

[48]  J. Carrascosa,et al.  Polymerization of bacteriophage T4 tail sheath protein mutants truncated at the C-termini. , 1999, Journal of structural biology.

[49]  Johannes Söding,et al.  The HHpred interactive server for protein homology detection and structure prediction , 2005, Nucleic Acids Res..

[50]  D. Ow,et al.  Bacteriophage P2 and P4. , 1991, Methods in enzymology.

[51]  U. Henning,et al.  The receptor specificity of bacteriophages can be determined by a tail fiber modifying protein. , 1985, The EMBO journal.

[52]  S. Hardies,et al.  Propagating the missing bacteriophages: a large bacteriophage in a new class , 2007, Virology Journal.

[53]  A. Engel,et al.  Phage T5 Straight Tail Fiber Is a Multifunctional Protein Acting as a Tape Measure and Carrying Fusogenic and Muralytic Activities* , 2008, Journal of Biological Chemistry.

[54]  M. Rossmann,et al.  Control of bacteriophage T4 tail lysozyme activity during the infection process. , 2005, Journal of molecular biology.

[55]  Mark J van Raaij,et al.  The structure of the receptor-binding domain of the bacteriophage T4 short tail fibre reveals a knitted trimeric metal-binding fold. , 2003, Journal of molecular biology.

[56]  M Unser,et al.  Molecular substructure of a viral receptor-recognition protein. The gp17 tail-fiber of bacteriophage T7. , 1988, Journal of molecular biology.

[57]  J. M. Sauder,et al.  Type VI secretion apparatus and phage tail-associated protein complexes share a common evolutionary origin , 2009, Proceedings of the National Academy of Sciences.

[58]  J. Franklin,et al.  Functional relationships and structural determinants of two bacteriophage T4 lysozymes: a soluble (gene e) and a baseplate-associated (gene 5) protein. , 1989, The New biologist.

[59]  T. Shinomiya,et al.  Regulation of pyocin genes in Pseudomonas aeruginosa by positive (prtN) and negative (prtR) regulatory genes , 1993, Journal of bacteriology.

[60]  H. Krisch,et al.  Genome plasticity in the distal tail fiber locus of the T-even bacteriophage: recombination between conserved motifs swaps adhesin specificity. , 1998, Journal of molecular biology.

[61]  L. Simon The infection of Escherichia coli by T2 and T4 bacteriophages as seen in the electron microscope. 3. Membrane-associated intracellular bacteriophages. , 1969, Virology.

[62]  M. F. Moody Structure of the sheath of bacteriophage T4. II. Rearrangement of the sheath subunits during contraction. , 1967, Journal of molecular biology.

[63]  M. Rossmann,et al.  The structure of gene product 6 of bacteriophage T4, the hinge-pin of the baseplate. , 2009, Structure.

[64]  C. van Delden,et al.  Lipopolysaccharide as Shield and Receptor for R-Pyocin-Mediated Killing in Pseudomonas aeruginosa , 2010, Journal of bacteriology.