Simulation modelling of a micro-system for time-resolved fluorescence measurements

This paper presents the simulation modelling of a typical experimental setup for time-resolved fluorescence measurement. The developed model takes into account the setup geometry, characteristics of light source, detector and fluorescent sample as well as the adopted measurement technique. A qualitative verification of the model has been reported before. In this paper, we present a quantitative analysis and verification of the system versatility. For this we conducted time-resolved fluorescence measurements using a two-chip based micro-system, including a blue micro-LED array as a light source and a CMOS SPAD array as a detector. The sample of interest (CdSe/ZnS quantum dots in toluene) in a micro-cavity slide and an excitation filter were placed in the gap between the excitation and detection planes. A time-correlated single photon counting module was used to build fluorescence decay curves. A range of experiments with different excitation light pulse widths and using several setups have been performed. The simulated data are in good agreement with measured results and the model proves to be flexible enough to simulate different light sources and detector quenching/recharging circuits. This model can be used to predict qualitative and quantitative results for specific experimental setups, supporting the explanations of observed effects and allowing the realisation of virtual experiments.

[1]  Jürgen Wolfrum,et al.  Time-resolved detection and identification of single analyte molecules in microcapillaries by time-correlated single-photon counting (TCSPC) , 1999 .

[2]  R. Henderson,et al.  Hardware implementation algorithm and error analysis of high-speed fluorescence lifetime sensing systems using center-of-mass method. , 2010, Journal of biomedical optics.

[3]  David Stoppa,et al.  Simulation modelling for the analysis and the optimal design of SPAD detectors for time-resolved fluorescence measurements , 2009, Optics + Optoelectronics.

[4]  M. Dawson,et al.  A vertically integrated CMOS micro-system for time-resolved fluorescence analysis , 2009, 2009 IEEE Biomedical Circuits and Systems Conference.

[5]  Ivan Prochazka,et al.  SPAD active quenching circuit optimized for satellite laser ranging applications , 2009, Optics + Optoelectronics.

[6]  M. Dawson,et al.  Fabrication of matrix-addressable InGaN-based microdisplays of high array density , 2003, IEEE Photonics Technology Letters.

[7]  J. Lakowicz,et al.  Single-molecule and FRET fluorescence correlation spectroscopy analyses of phage DNA packaging: colocalization of packaged phage T4 DNA ends within the capsid. , 2010, Journal of molecular biology.

[8]  E. Charbon,et al.  Fast-fluorescence dynamics in nonratiometric calcium indicators. , 2008, Optics letters.

[9]  D. O'connor,et al.  Time-Correlated Single Photon Counting , 1984 .

[10]  W. Becker Advanced Time-Correlated Single Photon Counting Techniques , 2005 .

[11]  A. Lacaita,et al.  Avalanche photodiodes and quenching circuits for single-photon detection. , 1996, Applied optics.

[12]  Jun Zhang,et al.  2.23 GHz gating InGaAs/InP single-photon avalanche diode for quantum key distribution , 2010, Defense + Commercial Sensing.

[13]  F. Pedichini,et al.  AquEYE, a single photon counting photometer for astronomy , 2009 .