Use of Meixner functions in estimation of Volterra kernels of nonlinear systems with delay

Volterra series representation of nonlinear systems is a mathematical analysis tool that has been successfully applied in many areas of biological sciences, especially in the area of modeling of hemodynamic response. In this study, we explored the possibility of using discrete time Meixner basis functions (MBFs) in estimating Volterra kernels of nonlinear systems. The problem of estimation of Volterra kernels can be formulated as a multiple regression problem and solved using least squares estimation. By expanding system kernels with some suitable basis functions, it is possible to reduce the number of parameters to be estimated and obtain better kernel estimates. Thus far, Laguerre basis functions have been widely used in this framework. However, research in signal processing indicates that when the kernels have a slow initial onset or delay, Meixner functions, which can be made to have a slow start, are more suitable in terms of providing a more accurate approximation to the kernels. We, therefore, compared the performance of Meixner functions, in kernel estimation, to that of Laguerre functions in some test cases that we constructed and in a real experimental case where we studied photoreceptor responses of photoreceptor cells of adult fruitflies (Drosophila melanogaster). Our results indicate that when there is a slow initial onset or delay, MBF expansion provides better kernel estimates.

[1]  Vasilis Z. Marmarelis,et al.  Nonlinear Analysis of Neuronal Systems , 1999 .

[2]  Gonzalo G. de Polavieja,et al.  The Rate of Information Transfer of Naturalistic Stimulation by Graded Potentials , 2003, The Journal of general physiology.

[3]  Susan Keilson Advanced methods of physiological system modeling , 2007, Annals of Biomedical Engineering.

[4]  Roger C. Hardie,et al.  Light Adaptation in Drosophila Photoreceptors: I. Response Dynamics and Signaling Efficiency at 25°C , 2001 .

[5]  J. H. Schuenemeyer,et al.  Generalized Linear Models (2nd ed.) , 1992 .

[6]  J. H. Hateren,et al.  Information theoretical evaluation of parametric models of gain control in blowfly photoreceptor cells , 2001, Vision Research.

[7]  P. McCullagh,et al.  Generalized Linear Models, 2nd Edn. , 1990 .

[8]  Theodore W. Berger,et al.  Decomposition of neural systems with nonlinear feedback using stimulus-response data , 1999, Neurocomputing.

[9]  Deniz Erdogmus,et al.  Stochastic error whitening algorithm for linear filter estimation with noisy data , 2003, Neural Networks.

[10]  Jorma Rissanen,et al.  Universal coding, information, prediction, and estimation , 1984, IEEE Trans. Inf. Theory.

[11]  H. Akaike A new look at the statistical model identification , 1974 .

[12]  H. Akaike Power spectrum estimation through autoregressive model fitting , 1969 .

[13]  Vito Volterra,et al.  Theory of Functionals and of Integral and Integro-Differential Equations , 2005 .

[14]  Vasilis Z. Marmarelis,et al.  Nonlinear Analysis of Renal Autoregulation in Rats Using Principal Dynamic Modes , 2004, Annals of Biomedical Engineering.

[15]  I. Hunter,et al.  The identification of nonlinear biological systems: Volterra kernel approaches , 2007, Annals of Biomedical Engineering.

[16]  A. S. French,et al.  Shaker K+ channels contribute early nonlinear amplification to the light response in Drosophila photoreceptors. , 2003, Journal of neurophysiology.

[17]  Vasilis Z. Marmarelis,et al.  VOLTERRA-WIENER ANALYSIS OF A CLASS OF NONLINEAR FEEDBACK SYSTEMS AND APPLICATION TO SENSORY BIOSYSTEMS , 1989 .

[18]  Sabine Van Huffel,et al.  Recent advances in total least squares techniques and errors-in-variables modeling , 1997 .

[19]  J. H. Hateren,et al.  Theoretical predictions of spatiotemporal receptive fields of fly LMCs, and experimental validation , 1992, Journal of Comparative Physiology A.

[20]  Albertus C. den Brinker,et al.  Meixner-like functions having a rational z-transform , 1995, Int. J. Circuit Theory Appl..

[21]  Jeffrey C. Lagarias,et al.  Convergence Properties of the Nelder-Mead Simplex Method in Low Dimensions , 1998, SIAM J. Optim..

[22]  Jorma Rissanen,et al.  The Minimum Description Length Principle in Coding and Modeling , 1998, IEEE Trans. Inf. Theory.

[23]  D. Westwick,et al.  Nonparametric identification of nonlinear biomedical systems, Part I: Theory , 1998 .

[24]  Roger C. Hardie,et al.  Visual transduction in Drosophila , 2001, Nature.

[25]  Eric R. Ziegel,et al.  Generalized Linear Models , 2002, Technometrics.

[26]  Vasilis Z. Marmarelis,et al.  Application of a Novel Modeling Method to the Nonstationary Properties of Potentiation in the Rabbit Hippocampus , 1999, Annals of Biomedical Engineering.

[27]  Andrew S. French,et al.  Phototransduction in the fly compound eye exhibits temporal resonances and a pure time delay , 1980, Nature.

[28]  T. Söderström,et al.  Instrumental variable methods for system identification , 1983 .

[29]  Michael C. K. Khoo,et al.  Assessment of closed-loop ventilatory stability in obstructive sleep apnea , 2002, IEEE Transactions on Biomedical Engineering.

[30]  Michael C. K. Khoo Understanding the Dynamics of State-Respiratory Interaction During Sleep , 1996 .

[31]  Peter M. Clarkson,et al.  Optimal and Adaptive Signal Processing , 1993 .