Stochastic severing of actin filaments by actin depolymerizing factor/cofilin controls the emergence of a steady dynamical regime.

Actin dynamics (i.e., polymerization/depolymerization) powers a large number of cellular processes. However, a great deal remains to be learned to explain the rapid actin filament turnover observed in vivo. Here, we developed a minimal kinetic model that describes key details of actin filament dynamics in the presence of actin depolymerizing factor (ADF)/cofilin. We limited the molecular mechanism to 1), the spontaneous growth of filaments by polymerization of actin monomers, 2), the ageing of actin subunits in filaments, 3), the cooperative binding of ADF/cofilin to actin filament subunits, and 4), filament severing by ADF/cofilin. First, from numerical simulations and mathematical analysis, we found that the average filament length, L, is controlled by the concentration of actin monomers (power law: 5/6) and ADF/cofilin (power law: -2/3). We also showed that the average subunit residence time inside the filament, T, depends on the actin monomer (power law: -1/6) and ADF/cofilin (power law: -2/3) concentrations. In addition, filament length fluctuations are approximately 20% of the average filament length. Moreover, ADF/cofilin fragmentation while modulating filament length keeps filaments in a high molar ratio of ATP- or ADP-P(i) versus ADP-bound subunits. This latter property has a protective effect against a too high severing activity of ADF/cofilin. We propose that the activity of ADF/cofilin in vivo is under the control of an affinity gradient that builds up dynamically along growing actin filaments. Our analysis shows that ADF/cofilin regulation maintains actin filaments in a highly dynamical state compatible with the cytoskeleton dynamics observed in vivo.

[1]  Marie-France Carlier,et al.  The dynamics of actin-based motility depend on surface parameters , 2002, Nature.

[2]  David D. Thomas,et al.  Cofilin increases the torsional flexibility and dynamics of actin filaments. , 2005, Journal of Molecular Biology.

[3]  T. Pollard,et al.  Characterization of actin filament severing by actophorin from Acanthamoeba castellanii , 1991, The Journal of cell biology.

[4]  T. Pollard,et al.  Control of the Assembly of ATP- and ADP-Actin by Formins and Profilin , 2006, Cell.

[5]  Y. Wang,et al.  Exchange of actin subunits at the leading edge of living fibroblasts: possible role of treadmilling , 1985, The Journal of cell biology.

[6]  Thomas D Pollard,et al.  Real-time measurements of actin filament polymerization by total internal reflection fluorescence microscopy. , 2005, Biophysical journal.

[7]  D. Gillespie Exact Stochastic Simulation of Coupled Chemical Reactions , 1977 .

[8]  Marie-France Carlier,et al.  Actin Depolymerizing Factor (ADF/Cofilin) Enhances the Rate of Filament Turnover: Implication in Actin-based Motility , 1997, The Journal of cell biology.

[9]  G. Bard Ermentrout,et al.  A model for actin-filament length distribution in a lamellipod , 2001, Journal of mathematical biology.

[10]  R. Mullins,et al.  Drosophila Spire is an actin nucleation factor , 2005, Nature.

[11]  L. Blanchoin,et al.  Actin-Filament Stochastic Dynamics Mediated by ADF/Cofilin , 2007, Current Biology.

[12]  D. Drubin,et al.  Cofilin recruitment and function during actin-mediated endocytosis dictated by actin nucleotide state , 2007, The Journal of cell biology.

[13]  E. Derivery,et al.  A Novel Mechanism for the Formation of Actin-Filament Bundles by a Nonprocessive Formin , 2006, Current Biology.

[14]  T. Pollard,et al.  Hydrolysis of ATP by polymerized actin depends on the bound divalent cation but not profilin. , 2002, Biochemistry.

[15]  Enrique M. De La Cruz,et al.  Cofilin binding to muscle and non-muscle actin filaments: isoform-dependent cooperative interactions. , 2005 .

[16]  Dylan T Burnette,et al.  Myosin II functions in actin-bundle turnover in neuronal growth cones , 2006, Nature Cell Biology.

[17]  E. Andrianantoandro,et al.  Mechanism of actin filament turnover by severing and nucleation at different concentrations of ADF/cofilin. , 2006, Molecular cell.

[18]  A. Kolomeisky,et al.  ATP hydrolysis stimulates large length fluctuations in single actin filaments. , 2005, Biophysical journal.

[19]  Ikuko Fujiwara,et al.  Microscopic analysis of polymerization dynamics with individual actin filaments , 2002, Nature Cell Biology.

[20]  Marie-France Carlier,et al.  Reconstitution of actin-based motility of Listeria and Shigella using pure proteins , 1999, Nature.

[21]  T D Pollard,et al.  Rate constants for the reactions of ATP- and ADP-actin with the ends of actin filaments , 1986, The Journal of cell biology.

[22]  Thomas D Pollard,et al.  Cellular Motility Driven by Assembly and Disassembly of Actin Filaments , 2003, Cell.

[23]  I. Yahara,et al.  Two activities of cofilin, severing and accelerating directional depolymerization of actin filaments, are affected differentially by mutations around the actin‐binding helix , 1999, The EMBO journal.

[24]  T. Pollard,et al.  Mechanism of Interaction of Acanthamoeba Actophorin (ADF/Cofilin) with Actin Filaments* , 1999, The Journal of Biological Chemistry.

[25]  M. Carlier,et al.  Synergy between Actin Depolymerizing Factor/Cofilin and Profilin in Increasing Actin Filament Turnover* , 1998, The Journal of Biological Chemistry.

[26]  M. Carlier,et al.  Continuous monitoring of Pi release following nucleotide hydrolysis in actin or tubulin assembly using 2-amino-6-mercapto-7-methylpurine ribonucleoside and purine-nucleoside phosphorylase as an enzyme-linked assay. , 1996, Biochemistry.

[27]  Daniel T Gillespie,et al.  Stochastic simulation of chemical kinetics. , 2007, Annual review of physical chemistry.

[28]  J. Cooper,et al.  Actin filament severing by cofilin. , 2007, Journal of molecular biology.

[29]  Gary G. Borisy,et al.  Arp2/3 Complex and Actin Depolymerizing Factor/Cofilin in Dendritic Organization and Treadmilling of Actin Filament Array in Lamellipodia , 1999, The Journal of cell biology.

[30]  T D Pollard,et al.  Molecular mechanisms controlling actin filament dynamics in nonmuscle cells. , 2000, Annual review of biophysics and biomolecular structure.

[31]  Julie A. Theriot,et al.  Actin microfilament dynamics in locomoting cells , 1991, Nature.

[32]  Dimitrios Vavylonis,et al.  Actin polymerization kinetics, cap structure, and fluctuations. , 2004, Proceedings of the National Academy of Sciences of the United States of America.