Remote sensing and machine learning for crop water stress determination in various crops: a critical review

The remote sensing (RS) technique is less cost- and labour- intensive than ground-based surveys for diverse applications in agriculture. Machine learning (ML), a branch of artificial intelligence (AI), provides an effective approach to construct a model for regression and classification of a multivariate and non-linear system. Without being explicitly programmed, machine learning models learn from training data, i.e., past experience. Machine learning, when applied to remotely sensed data, has the potential to evolve a real-time farm-specific management system to reinforce farmers' ability to make appropriate decisions. Recently, the use of machine learning techniques combined with RS data has reshaped precision agriculture in many ways, such as crop identification, yield prediction and crop water stress assessment, with better accuracy than conventional RS methods. As agriculture accounts for approximately 70% of the worldwide water withdrawals, it must be used in the most efficient way to obtain maximum yields and food production. The use of water management and irrigation based on plant water stress have been demonstrated to not only save water but also increase yield. To date, RS and ML-based results have encouraged farmers and decision-makers to adopt this technology to meet global food demands. This phenomenon has led to the much-needed interest of researchers in using ML to improve agriculture outcomes. However, the use of ML for the potential evaluation of water stress continues to be unexplored and the existing methods can still be greatly improved. This study aims to present an overall review of the widely used methods for crop water stress monitoring using remote sensing and machine learning and focuses on future directions for researchers.

[1]  Tianqi Chen,et al.  XGBoost: A Scalable Tree Boosting System , 2016, KDD.

[2]  S. Running,et al.  A review of remote sensing based actual evapotranspiration estimation , 2016 .

[3]  Baofeng Su,et al.  Significant Remote Sensing Vegetation Indices: A Review of Developments and Applications , 2017, J. Sensors.

[4]  S. Idso,et al.  Wheat canopy temperature: A practical tool for evaluating water requirements , 1977 .

[5]  John R. Miller,et al.  Assessing vineyard condition with hyperspectral indices: Leaf and canopy reflectance simulation in a row-structured discontinuous canopy , 2005 .

[6]  J. Baluja,et al.  Assessment of vineyard water status variability by thermal and multispectral imagery using an unmanned aerial vehicle (UAV) , 2012, Irrigation Science.

[7]  Ataur Rahman,et al.  NDVI Derived Sugarcane Area Identification and Crop Condition Assessment , 2001 .

[8]  C. Field,et al.  A narrow-waveband spectral index that tracks diurnal changes in photosynthetic efficiency , 1992 .

[9]  Sidik Mulyono,et al.  Identifying Sugarcane Plantation using LANDSAT-8 Images with Support Vector Machines , 2016 .

[10]  Dong Jiang,et al.  An artificial neural network model for estimating crop yields using remotely sensed information , 2004 .

[11]  L. Serrano,et al.  Assessing vineyard water status using the reflectance based Water Index , 2010 .

[12]  Saleh Taghvaeian,et al.  Infrared Thermometry to Estimate Crop Water Stress Index and Water Use of Irrigated Maize in Northeastern Colorado , 2012, Remote. Sens..

[13]  Bradley A. King,et al.  Evaluation of neural network modeling to predict non-water-stressed leaf temperature in wine grape for calculation of crop water stress index , 2016 .

[14]  M. Kacira,et al.  Establishing crop water stress index (CWSI) threshold values for early, non-contact detection of plant water stress , 2000 .

[15]  Mac McKee,et al.  Assessment of optimal irrigation water allocation for pressurized irrigation system using water balance approach, learning machines, and remotely sensed data , 2015 .

[16]  Hujun Yin,et al.  Feature-Ensemble-Based Novelty Detection for Analyzing Plant Hyperspectral Datasets , 2018, IEEE Journal of Selected Topics in Applied Earth Observations and Remote Sensing.

[17]  José A. Sobrino,et al.  Satellite-derived land surface temperature: Current status and perspectives , 2013 .

[18]  Guofu Yuan,et al.  Evaluation of a crop water stress index for detecting water stress in winter wheat in the North China Plain , 2004 .

[19]  Dimitrios Moshou,et al.  Water stress detection based on optical multisensor fusion with a least squares support vector machine classifier , 2014 .

[20]  Qin Zhang,et al.  Automatic irrigation scheduling of apple trees using theoretical crop water stress index with an innovative dynamic threshold , 2015, Comput. Electron. Agric..

[21]  John A. Gamon,et al.  Assessing leaf pigment content and activity with a reflectometer , 1999 .

[22]  Giles M. Foody,et al.  Toward intelligent training of supervised image classifications: directing training data acquisition for SVM classification , 2004 .

[23]  María Romero,et al.  Vineyard water status estimation using multispectral imagery from an UAV platform and machine learning algorithms for irrigation scheduling management , 2018, Comput. Electron. Agric..

[24]  J. A. Schell,et al.  Monitoring vegetation systems in the great plains with ERTS , 1973 .

[25]  Richard O. Sinnott,et al.  A Crop Water Stress Monitoring System Utilising a Hybrid e-Infrastructure , 2017, UCC.

[26]  J. Roujean,et al.  Estimating PAR absorbed by vegetation from bidirectional reflectance measurements , 1995 .

[27]  John R. Miller,et al.  Integrated narrow-band vegetation indices for prediction of crop chlorophyll content for application to precision agriculture , 2002 .

[28]  Luis A. Bastidas,et al.  Downscaling and Forecasting of Evapotranspiration Using a Synthetic Model of Wavelets and Support Vector Machines , 2008, IEEE Transactions on Geoscience and Remote Sensing.

[29]  G. Rondeaux,et al.  Optimization of soil-adjusted vegetation indices , 1996 .

[30]  Leo Breiman,et al.  Random Forests , 2001, Machine Learning.

[31]  Johannes R. Sveinsson,et al.  Random Forests for land cover classification , 2006, Pattern Recognit. Lett..

[32]  Manuel A. Andrade Machine learning algorithms applied to the forecasting of crop water stress indicators , 2018 .

[33]  W. E. Larson,et al.  Coincident detection of crop water stress, nitrogen status and canopy density using ground-based multispectral data. , 2000 .

[34]  Tauqueer Ahmad,et al.  Comparison of various modelling approaches for water deficit stress monitoring in rice crop through hyperspectral remote sensing , 2019, Agricultural Water Management.

[35]  Pablo J. Zarco-Tejada,et al.  Mapping canopy conductance and CWSI in olive orchards using high resolution thermal remote sensing imagery , 2009 .

[36]  Mario Minacapilli,et al.  Detecting crop water status in mature olive groves using vegetation spectral measurements , 2014 .

[37]  D. Mulla Twenty five years of remote sensing in precision agriculture: Key advances and remaining knowledge gaps , 2013 .

[38]  Onisimo Mutanga,et al.  Detecting the Early Stage of Phaeosphaeria Leaf Spot Infestations in Maize Crop Using In Situ Hyperspectral Data and Guided Regularized Random Forest Algorithm , 2017 .

[39]  Irrigation scheduling of Kohlrabi (Brassica oleracea var. gongylodes) using crop water stress index , 2004 .

[40]  Wan,et al.  Application of artificial neural network in predicting crop yield: a review , 2014 .

[41]  S. Idso,et al.  Normalizing the stress-degree-day parameter for environmental variability☆ , 1981 .

[42]  R. Quiroz,et al.  Defining biological thresholds associated to plant water status for monitoring water restriction effects: Stomatal conductance and photosynthesis recovery as key indicators in potato , 2016 .

[43]  Frank Veroustraete,et al.  Assessment of Evapotranspiration and Soil Moisture Content Across Different Scales of Observation , 2008, Sensors.

[44]  L. S. Pereira,et al.  Crop evapotranspiration : guidelines for computing crop water requirements , 1998 .

[45]  Wolfram Spreer,et al.  Use of thermography for high throughput phenotyping of tropical maize adaptation in water stress , 2011 .

[46]  Yongming Xu,et al.  Mapping Monthly Air Temperature in the Tibetan Plateau From MODIS Data Based on Machine Learning Methods , 2018, IEEE Journal of Selected Topics in Applied Earth Observations and Remote Sensing.

[47]  Juan José Rodríguez Diez,et al.  Rotation Forest: A New Classifier Ensemble Method , 2006, IEEE Transactions on Pattern Analysis and Machine Intelligence.

[48]  C. Rosen,et al.  Crop water stress index derived from multi-year ground and aerial thermal images as an indicator of potato water status , 2014, Precision Agriculture.

[49]  N. Turner Measurement of plant water status by the pressure chamber technique , 1988, Irrigation Science.

[50]  João Gonçalves,et al.  Hyperspectral-based predictive modelling of grapevine water status in the Portuguese Douro wine region , 2017, Int. J. Appl. Earth Obs. Geoinformation.

[51]  Farid Melgani,et al.  A Multiobjective Genetic SVM Approach for Classification Problems With Limited Training Samples , 2009, IEEE Transactions on Geoscience and Remote Sensing.

[52]  S. Ustin,et al.  Water content estimation in vegetation with MODIS reflectance data and model inversion methods , 2003 .

[53]  Giles M. Foody,et al.  A relative evaluation of multiclass image classification by support vector machines , 2004, IEEE Transactions on Geoscience and Remote Sensing.

[54]  Andy Liaw,et al.  Classification and Regression by randomForest , 2007 .

[55]  Jon Atli Benediktsson,et al.  A Novel Technique for Optimal Feature Selection in Attribute Profiles Based on Genetic Algorithms , 2013, IEEE Transactions on Geoscience and Remote Sensing.

[56]  Vladimir Alexandrov,et al.  Artificial neural networks and their application in biological and agricultural research , 2014 .

[57]  Peter Dalgaard,et al.  R Development Core Team (2010): R: A language and environment for statistical computing , 2010 .

[58]  G. Birth,et al.  Measuring the Color of Growing Turf with a Reflectance Spectrophotometer1 , 1968 .

[59]  Y. Cohen,et al.  Use of thermal and visible imagery for estimating crop water status of irrigated grapevine. , 2006, Journal of experimental botany.

[60]  Timothy A. Warner,et al.  Does single broadband or multispectral thermal data add information for classification of visible, near‐ and shortwave infrared imagery of urban areas? , 2009 .

[61]  Lu Zhang,et al.  Evaluation of daily evapotranspiration estimates from instantaneous measurements , 1995 .

[62]  Anand Khobragade,et al.  Optimization of statistical learning algorithm for crop discrimination using remote sensing data , 2015, 2015 IEEE International Advance Computing Conference (IACC).

[63]  A. Karnieli,et al.  Combining leaf physiology, hyperspectral imaging and partial least squares-regression (PLS-R) for grapevine water status assessment , 2015 .

[64]  A COMPARISON OF THE GRAVIMETRIC AND TDR METHODS IN TERMS OF DETERMINING THE SOIL WATER CONTENT OF THE CORN PLANT , 2016 .

[65]  A. Holtslag,et al.  A remote sensing surface energy balance algorithm for land (SEBAL)-1. Formulation , 1998 .

[66]  S. Prasher,et al.  Classification of hyperspectral data by decision trees and artificial neural networks to identify weed stress and nitrogen status of corn , 2003 .

[67]  Lorenzo Bruzzone,et al.  Classification of hyperspectral remote sensing images with support vector machines , 2004, IEEE Transactions on Geoscience and Remote Sensing.

[68]  Nitesh K. Poona,et al.  Modelling Water Stress in a Shiraz Vineyard Using Hyperspectral Imaging and Machine Learning , 2018, Remote. Sens..

[69]  Vladimir Vapnik,et al.  An overview of statistical learning theory , 1999, IEEE Trans. Neural Networks.

[70]  P. Zarco-Tejada,et al.  A PRI-based water stress index combining structural and chlorophyll effects: Assessment using diurnal narrow-band airborne imagery and the CWSI thermal index , 2013 .

[71]  Mariana Belgiu,et al.  Random forest in remote sensing: A review of applications and future directions , 2016 .

[72]  J. E. P. Turco,et al.  Water stress indices for the sugarcane crop on different irrigated surfaces , 2016 .

[73]  Onisimo Mutanga,et al.  Detecting Sirex noctilio grey-attacked and lightning-struck pine trees using airborne hyperspectral data, random forest and support vector machines classifiers , 2014 .

[74]  Riyad Ismail,et al.  Investigating the Utility of Oblique Tree-Based Ensembles for the Classification of Hyperspectral Data , 2016, Sensors.

[75]  Shahaboddin Shamshirband,et al.  Comparative analysis of reference evapotranspiration equations modelling by extreme learning machine , 2016, Comput. Electron. Agric..

[76]  H. L. Penman Natural evaporation from open water, bare soil and grass , 1948, Proceedings of the Royal Society of London. Series A. Mathematical and Physical Sciences.

[77]  Simon D. Jones,et al.  Remote sensing of nitrogen and water stress in wheat , 2007 .

[78]  José A. Malpica,et al.  CONSEQUENCES OF THE HUGHES PHENOMENON ON SOME CLASSIFICATION TECHNIQUES , 2011 .

[79]  Yongguo Yang,et al.  Evapotranspiration estimation using four different machine learning approaches in different terrestrial ecosystems , 2018, Comput. Electron. Agric..

[80]  Earl D. Vories,et al.  Spectral Response of Cotton Canopy to Water Stress , 2006 .

[81]  Elfatih M. Abdel-Rahman,et al.  The application of remote sensing techniques to sugarcane (Saccharum spp. hybrid) production: a review of the literature , 2008 .

[82]  Abd Ali Naseri,et al.  A satellite based crop water stress index for irrigation scheduling in sugarcane fields , 2017 .

[83]  Paul M. Mather,et al.  Support vector machines for classification in remote sensing , 2005 .

[84]  Gregoriy Kaplan,et al.  Estimating cotton water consumption using a time series of Sentinel-2 imagery , 2018 .

[85]  S. Evett,et al.  Canopy temperature based system effectively schedules and controls center pivot irrigation of cotton , 2010 .

[86]  A. Huete,et al.  Vegetation Index Methods for Estimating Evapotranspiration by Remote Sensing , 2010 .

[87]  Pablo J. Zarco-Tejada,et al.  Thermal and Narrowband Multispectral Remote Sensing for Vegetation Monitoring From an Unmanned Aerial Vehicle , 2009, IEEE Transactions on Geoscience and Remote Sensing.

[88]  P. Gong,et al.  Reduction of atmospheric and topographic effect on Landsat TM data for forest classification , 2008 .

[89]  H. Jones Plants and Microclimate: Other environmental factors: wind, altitude, climate change and atmospheric pollutants , 2013 .

[90]  B. Gao NDWI—A normalized difference water index for remote sensing of vegetation liquid water from space , 1996 .

[91]  Y. B. Çolak,et al.  Evaluation of Crop Water Stress Index (CWSI) for Eggplant under Varying Irrigation Regimes Using Surface and Subsurface Drip Systems , 2015 .

[92]  S. Idso,et al.  Canopy temperature as a crop water stress indicator , 1981 .

[93]  William R DeTar,et al.  AIRBORNE REMOTE SENSING TO DETECT PLANT WATER STRESS IN FULL CANOPY COTTON , 2006 .

[94]  Sanjay Kumar Ghosh,et al.  CROP CLASSIFICATION ON SINGLE DATE SENTINEL-2 IMAGERY USING RANDOM FOREST AND SUPPOR VECTOR MACHINE , 2018, The International Archives of the Photogrammetry, Remote Sensing and Spatial Information Sciences.

[95]  Chih-Jen Lin,et al.  A comparison of methods for multiclass support vector machines , 2002, IEEE Trans. Neural Networks.

[96]  Jungho Im,et al.  Support vector machines in remote sensing: A review , 2011 .

[97]  F. Gao,et al.  Generating daily land surface temperature at Landsat resolution by fusing Landsat and MODIS data , 2014 .

[98]  C. Jordan Derivation of leaf-area index from quality of light on the forest floor , 1969 .

[99]  Chenghai Yang,et al.  Original paper: Evaluating high resolution SPOT 5 satellite imagery for crop identification , 2011 .

[100]  Y. Erdem,et al.  Determination of Crop Water Stress Index for Irrigation Scheduling of Bean (Phaseolus vulgaris L.) , 2006 .

[101]  M. Kacira,et al.  Crop reflectance monitoring as a tool for water stress detection in greenhouses: A review , 2016 .

[102]  Chandra A. Madramootoo,et al.  Recent advances in crop water stress detection , 2017, Comput. Electron. Agric..

[103]  Wenzhong Shi,et al.  Advancing of Land Surface Temperature Retrieval Using Extreme Learning Machine and Spatio-Temporal Adaptive Data Fusion Algorithm , 2015, Remote. Sens..

[104]  Janet Franklin,et al.  A Neural Network Method for Efficient Vegetation Mapping , 1999 .

[105]  J. Fernández,et al.  Plant-Based Methods for Irrigation Scheduling of Woody Crops , 2017 .

[106]  A. Huete,et al.  A Modified Soil Adjusted Vegetation Index , 1994 .

[107]  Matthew Bardeen,et al.  Artificial Neural Network to Predict Vine Water Status Spatial Variability Using Multispectral Information Obtained from an Unmanned Aerial Vehicle (UAV) , 2017, Sensors.

[108]  Richard G. Allen,et al.  Satellite-Based Energy Balance for Mapping Evapotranspiration with Internalized Calibration (METRIC)—Model , 2007 .

[109]  P. Sharma,et al.  Assessment of Different Methods for Soil Moisture Estimation: A Review , 2018 .

[110]  M. S. Moran,et al.  Canopy temperature variability as an indicator of crop water stress severity , 2006, Irrigation Science.

[111]  M. Alizadeh,et al.  A new approach for simulating and forecasting the rainfall-runoff process within the next two months , 2017 .

[112]  Y. Cohen,et al.  Estimation of leaf water potential by thermal imagery and spatial analysis. , 2005, Journal of experimental botany.