Ligand‐ and proton‐linked conformational changes of the ferrous 2/2 hemoglobin of Pseudoalteromonas haloplanktis TAC125

The spectroscopic and ligand‐binding properties of a 2/2 globin from the Antarctic bacterium Pseudoalteromonas haloplanktis TAC125 have been studied in the ferrous state. It displays two major conformations characterized by CO‐association rates that differ by a factor of 20, with relative fractions that depend on pH. A dynamic equilibrium is found between the two conformations, as indicated by an enhanced slower phase when lower CO levels were used to allow a longer time to facilitate the transition. The deoxy form, in the absence of external ligands, is a mixture of a predominant six‐coordinate low spin form and a five‐coordinate high‐spin state; the proportion of low spin increasing at alkaline pH. In addition, at temperatures above the physiological temperature of 1 °C, an enhanced tendency of the protein to oxidize is observed. © 2011 IUBMB IUBMB Life, 63(7): 566–573, 2011

[1]  M. Martí,et al.  The peculiar heme pocket of the 2/2 hemoglobin of cold-adapted Pseudoalteromonas haloplanktis TAC125 , 2011, JBIC Journal of Biological Inorganic Chemistry.

[2]  D. Estrin,et al.  Heme pocket structural properties of a bacterial truncated hemoglobin from Thermobifida fusca. , 2010, Biochemistry.

[3]  M. Tutino,et al.  The role of a 2-on-2 haemoglobin in oxidative and nitrosative stress resistance of Antarctic Pseudoalteromonas haloplanktis TAC125. , 2010, Biochimie.

[4]  A. Boffi,et al.  Sulfide binding properties of truncated hemoglobins. , 2010, Biochemistry.

[5]  M. Nardini,et al.  HisE11 and HisF8 provide bis-histidyl heme hexa-coordination in the globin domain of Geobacter sulfurreducens globin-coupled sensor. , 2009, Journal of molecular biology.

[6]  E. M. Souza,et al.  Spectroscopic characterization of a truncated hemoglobin from the nitrogen-fixing bacterium Herbaspirillum seropedicae , 2008, JBIC Journal of Biological Inorganic Chemistry.

[7]  M. Alam,et al.  Characterization of a Globin-coupled Oxygen Sensor with a Gene-regulating Function* , 2007, Journal of Biological Chemistry.

[8]  C. Verde,et al.  The truncated hemoglobins in the Antarctic psychrophilic bacterium Pseudoalteromonas haloplanktis TAC125. , 2007, Gene.

[9]  Andrea Ilari,et al.  Crystal structure and ligand binding properties of the truncated hemoglobin from Geobacillus stearothermophilus. , 2007, Archives of biochemistry and biophysics.

[10]  A. Danchin,et al.  Coping with cold: the genome of the versatile marine Antarctica bacterium Pseudoalteromonas haloplanktis TAC125. , 2005, Genome research.

[11]  J. Gough,et al.  Three globin lineages belonging to two structural classes in genomes from the three kingdoms of life. , 2005, Proceedings of the National Academy of Sciences of the United States of America.

[12]  Veronica Morea,et al.  A novel thermostable hemoglobin from the actinobacterium Thermobifida fusca , 2005, The FEBS journal.

[13]  Veronica Morea,et al.  The Truncated Oxygen-avid Hemoglobin from Bacillus subtilis , 2005, Journal of Biological Chemistry.

[14]  T. Spiro,et al.  CO as a vibrational probe of heme protein active sites. , 2005, Journal of inorganic biochemistry.

[15]  Alessandra Pesce,et al.  Structural bases for heme binding and diatomic ligand recognition in truncated hemoglobins. , 2005, Journal of inorganic biochemistry.

[16]  L. Moens,et al.  Neuroglobin and other hexacoordinated hemoglobins show a weak temperature dependence of oxygen binding. , 2004, Biophysical journal.

[17]  Paolo Ascenzi,et al.  A TyrCD1/TrpG8 hydrogen bond network and a TyrB10—TyrCD1 covalent link shape the heme distal site of Mycobacterium tuberculosis hemoglobin O , 2003, Proceedings of the National Academy of Sciences of the United States of America.

[18]  David Dantsker,et al.  Reactions of Mycobacterium tuberculosis truncated hemoglobin O with ligands reveal a novel ligand-inclusive hydrogen bond network. , 2003, Biochemistry.

[19]  Guanghui Wu,et al.  Microbial globins. , 2003, Advances in microbial physiology.

[20]  M. Bolognesi,et al.  The truncated hemoglobin from Mycobacterium leprae. , 2002, Biochemical and biophysical research communications.

[21]  Martino Bolognesi,et al.  Truncated Hemoglobins: A New Family of Hemoglobins Widely Distributed in Bacteria, Unicellular Eukaryotes, and Plants* 210 , 2002, The Journal of Biological Chemistry.

[22]  ' BarryA.Springer,et al.  Mechanisms of Ligand Recognition in Myoglobin , 2001 .

[23]  M Bolognesi,et al.  A novel two‐over‐two α‐helical sandwich fold is characteristic of the truncated hemoglobin family , 2000, The EMBO journal.

[24]  Miguel L. Teodoro,et al.  BOUND CO IS A MOLECULAR PROBE OF ELECTROSTATIC POTENTIAL IN THE DISTAL POCKET OF MYOGLOBIN , 1999 .

[25]  D. Rousseau,et al.  Chlamydomonas Chloroplast Ferrous Hemoglobin , 1999, The Journal of Biological Chemistry.

[26]  J R Helliwell,et al.  Distal pocket polarity in ligand binding to myoglobin: deoxy and carbonmonoxy forms of a threonine68(E11) mutant investigated by X-ray crystallography and infrared spectroscopy. , 1994, Biochemistry.

[27]  M. Brunori,et al.  Kinetic evidence for a role of heme geometry on the modulation of carbon monoxide reactivity in human hemoglobin. , 1988, The Journal of biological chemistry.

[28]  Hydrogen-bond and deprotonation effects on the resonance Raman iron-imidazole mode in deoxyhemoglobin models: implications for hemoglobin cooperativity , 1980 .

[29]  H. Hori,et al.  Iron-ligand stretching band in the resonance Raman spectra of ferrous iron porphyrin derivatives. Importance as a probe band for quaternary structure of hemoglobin , 1980 .

[30]  M. Brunori,et al.  The balance sheet of a hemoglobin. Thermodynamics of CO binding by hemoglobin trout I. , 1977, Journal of molecular biology.

[31]  M. Brunori,et al.  Enzyme Proteins. (Book Reviews: Hemoglobin and Myoglobin in Their Reactions with Ligands) , 1971 .

[32]  J. Wittenberg The molecular mechanism of hemoglobin-facilitated oxygen diffusion. , 1966, The Journal of biological chemistry.

[33]  A. Selim,et al.  A new method for the isolation of L-alanine and L-proline from protein hydrolysates. , 1957, The Journal of biological chemistry.