Placing biodiversity in ecosystem models without getting lost in translation

[1]  A. Queirós,et al.  Can benthic community structure be used to predict the process of bioturbation in real ecosystems , 2015 .

[2]  M. Solan,et al.  A bioturbation classification of European marine infaunal invertebrates , 2013, Ecology and evolution.

[3]  M. Solan,et al.  Consequences of a simulated rapid ocean acidification event for benthic ecosystem processes and functions. , 2013, Marine pollution bulletin.

[4]  Momme Butenschön,et al.  Heterogeneity of impacts of high CO 2 on the North Western European Shelf , 2013 .

[5]  A. D. Barton,et al.  The biogeography of marine plankton traits. , 2013, Ecology letters.

[6]  Emilio Marañón,et al.  Unimodal size scaling of phytoplankton growth and the size dependence of nutrient uptake and use. , 2013, Ecology letters.

[7]  Lindsay A. Turnbull,et al.  Identification of 100 fundamental ecological questions , 2013 .

[8]  Paul J. Somerfield,et al.  Extensive gaps and biases in our knowledge of a well‐known fauna: implications for integrating biological traits into macroecology , 2012 .

[9]  M. Butenschön,et al.  A mechanistic explanation of the Sargasso Sea DMS “summer paradox” , 2012, Biogeochemistry.

[10]  Julian Icarus Allen,et al.  How should sparse in situ measurements be compared to continuous model data , 2012 .

[11]  M. Pahlow,et al.  Top-down control of marine phytoplankton diversity in a global ecosystem model , 2012 .

[12]  G. Daily,et al.  Biodiversity loss and its impact on humanity , 2012, Nature.

[13]  Jarrett E. K. Byrnes,et al.  A global synthesis reveals biodiversity loss as a major driver of ecosystem change , 2012, Nature.

[14]  T. Wernberg,et al.  A decade of climate change experiments on marine organisms: procedures, patterns and problems , 2012 .

[15]  C. Harley,et al.  Predicting ecosystem shifts requires new approaches that integrate the effects of climate change across entire systems , 2012, Biology Letters.

[16]  G. Somero,et al.  Mechanisms defining thermal limits and adaptation in marine ectotherms: an integrative view. , 2012 .

[17]  G. Penha-Lopes,et al.  What is bioturbation? The need for a precise definition for fauna in aquatic sciences , 2012 .

[18]  M. Solan,et al.  An Open Source Simulation Model for Soil and Sediment Bioturbation , 2011, PloS one.

[19]  C. Harley Climate Change, Keystone Predation, and Biodiversity Loss , 2011, Science.

[20]  E. K. Pikitch,et al.  Trophic Downgrading of Planet Earth , 2011, Science.

[21]  Andrew Gonzalez,et al.  The functional role of producer diversity in ecosystems. , 2011, American journal of botany.

[22]  A. Hoffmann,et al.  Climate change and evolutionary adaptation , 2011, Nature.

[23]  Jorn Bruggeman,et al.  A PHYLOGENETIC APPROACH TO THE ESTIMATION OF PHYTOPLANKTON TRAITS 1 , 2011, Journal of phycology.

[24]  S. Dupont,et al.  What meta-analysis can tell us about vulnerability of marine biodiversity to ocean acidification? , 2010 .

[25]  C. Duarte,et al.  Ocean acidification: Separating evidence from judgment - A reply to Dupont et al. , 2010 .

[26]  D. Harbour,et al.  Long-term phytoplankton community dynamics in the western English Channel , 2010 .

[27]  D. Wethey,et al.  Oscillatory porewater bioadvection in marine sediments induced by hydraulic activities of Arenicola marina , 2010 .

[28]  R. Lande,et al.  Adaptation, Plasticity, and Extinction in a Changing Environment: Towards a Predictive Theory , 2010, PLoS biology.

[29]  J. Icarus Allen,et al.  Marine ecosystem models for earth systems applications: The MarQUEST experience , 2010 .

[30]  Thomas R. Anderson,et al.  Parameter optimisation techniques and the problem of underdetermination in marine biogeochemical models , 2010 .

[31]  G. Somero,et al.  The physiology of climate change: how potentials for acclimatization and genetic adaptation will determine ‘winners’ and ‘losers’ , 2010, Journal of Experimental Biology.

[32]  M. Loreau Linking biodiversity and ecosystems: towards a unifying ecological theory , 2010, Philosophical Transactions of the Royal Society B: Biological Sciences.

[33]  S. Neill,et al.  Context dependency of relationships between biodiversity and ecosystem functioning is different for multiple ecosystem functions , 2009 .

[34]  E. Virginia Armbrust,et al.  The life of diatoms in the world's oceans , 2009, Nature.

[35]  Paul J. Somerfield,et al.  A multivariate approach to model skill assessment , 2009 .

[36]  P. Levin,et al.  Integrated Ecosystem Assessments: Developing the Scientific Basis for Ecosystem-Based Management of the Ocean , 2009, PLoS biology.

[37]  M. Cadotte,et al.  Consequences of dominance: a review of evenness effects on local and regional ecosystem processes. , 2008, Ecology.

[38]  Elena Litchman,et al.  The role of functional traits and trade-offs in structuring phytoplankton communities: scaling from cellular to ecosystem level. , 2007, Ecology letters.

[39]  Scott C. Doney,et al.  Assessment of skill and portability in regional marine biogeochemical models : Role of multiple planktonic groups , 2007 .

[40]  A. Hector,et al.  Biodiversity and ecosystem multifunctionality , 2007, Nature.

[41]  Sebastiaan A.L.M. Kooijman,et al.  A biodiversity‐inspired approach to aquatic ecosystem modeling , 2007 .

[42]  F. Meysman,et al.  A comparison of sediment reworking rates by the surface deposit-feeding bivalve Abra ovata during summertime and wintertime, with a comparison between two models of sediment reworking , 2007 .

[43]  Sallie W. Chisholm,et al.  Emergent Biogeography of Microbial Communities in a Model Ocean , 2007, Science.

[44]  Michael J. Barnsley,et al.  Environmental Modeling: A Practical Introduction , 2007 .

[45]  Rainer Knust,et al.  Climate Change Affects Marine Fishes Through the Oxygen Limitation of Thermal Tolerance , 2007, Science.

[46]  P. Balvanera,et al.  Quantifying the evidence for biodiversity effects on ecosystem functioning and services. , 2006, Ecology letters.

[47]  R. Rosenberg,et al.  Ecosystem engineering: the impact of bioturbation on biogeochemical processes in marine and freshwater benthic habitats , 2006, Aquatic Sciences.

[48]  R. Rosenberg,et al.  Effects of food availability on sediment reworking in Abra ovata and A. nitida , 2006 .

[49]  Owen L. Petchey,et al.  Functional diversity: back to basics and looking forward. , 2006, Ecology letters.

[50]  S. Rogers,et al.  Matching biological traits to environmental conditions in marine benthic ecosystems , 2006 .

[51]  B. Enquist,et al.  Rebuilding community ecology from functional traits. , 2006, Trends in ecology & evolution.

[52]  Kevin J. Flynn,et al.  Castles built on sand : dysfunctionality in plankton models and the inadequacy of dialogue between biologists and modellers , 2005 .

[53]  Thomas R. Anderson,et al.  Plankton functional type modelling : running before we can walk? , 2005 .

[54]  Andrew J. Watson,et al.  Ecosystem dynamics based on plankton functional types for global ocean biogeochemistry models , 2005 .

[55]  K. Ruddick,et al.  Modelling diatom and Phaeocystis blooms and nutrient cycles in the Southern Bight of the North Sea: the MIRO model , 2005 .

[56]  F. Chapin,et al.  EFFECTS OF BIODIVERSITY ON ECOSYSTEM FUNCTIONING: A CONSENSUS OF CURRENT KNOWLEDGE , 2005 .

[57]  Jerry Blackford,et al.  Ecosystem dynamics at six contrasting sites: a generic modelling study , 2004 .

[58]  Jon Norberg,et al.  Biodiversity and ecosystem functioning: A complex adaptive systems approach , 2004 .

[59]  Kevin J. Gaston,et al.  Macrophysiology: large‐scale patterns in physiological traits and their ecological implications , 2004 .

[60]  Kenneth L. Denman,et al.  Modelling planktonic ecosystems: parameterizing complexity , 2003 .

[61]  M. Barangé Ecosystem science and the sustainable management of marine resources: from Rio to Johannesburg , 2003 .

[62]  J. Stachowicz,et al.  BIODIVERSITY, INVASION RESISTANCE, AND MARINE ECOSYSTEM FUNCTION: RECONCILING PATTERN AND PROCESS , 2002 .

[63]  A. Leynaert,et al.  Diatom succession, silicification and silicic acid availability in Belgian coastal waters (Southern North Sea) , 2002 .

[64]  S. Díaz,et al.  Vive la différence: plant functional diversity matters to ecosystem processes , 2001 .

[65]  J Norberg,et al.  Phenotypic diversity and ecosystem functioning in changing environments: A theoretical framework , 2001, Proceedings of the National Academy of Sciences of the United States of America.

[66]  Michel Loreau,et al.  Partitioning selection and complementarity in biodiversity experiments , 2001, Nature.

[67]  Jessica Gurevitch,et al.  THE META‐ANALYSIS OF RESPONSE RATIOS IN EXPERIMENTAL ECOLOGY , 1999 .

[68]  M. Loreau,et al.  Biodiversity and ecosystem functioning: a mechanistic model. , 1998, Proceedings of the National Academy of Sciences of the United States of America.

[69]  Carlo H. R. Heip,et al.  Modeling 210Pb-derived mixing activity in ocean margin sediments: Diffusive versus nonlocal mixing , 1996 .

[70]  V. Heywood,et al.  Global Biodiversity Assessment , 1996 .

[71]  P. Ruardij,et al.  The European regional seas ecosystem model, a complex marine ecosystem model , 1995 .

[72]  M. A. Leibold The Niche Concept Revisited: Mechanistic Models and Community Context , 1995 .

[73]  Jerry C. Blackford,et al.  Self-assembling food webs : a global viewpoint of coexistence of species in Lotka-Volterra communities , 1992 .

[74]  J. N. R. Jeffers,et al.  An introduction to systems analysis, with ecological applications , 1980 .

[75]  S. Taguchi RELATIONSHIP BETWEEN PHOTOSYNTHESIS AND CELL SIZE OF MARINE DIATOMS 1 2 , 1976 .

[76]  David R. Schink,et al.  Quantitative estimates of biological mixing rates in abyssal sediments , 1975 .

[77]  A. Einstein On the Method of Theoretical Physics , 1934, Philosophy of Science.

[78]  Julian Icarus Allen,et al.  Quantifying uncertainty in high-resolution coupled hydrodynamic-ecosystem models , 2007 .

[79]  P. Tréguer,et al.  Growth physiology and fate of diatoms in the ocean: a review , 2005 .

[80]  Thomas Brey,et al.  Population dynamics in benthic invertebrates. A virtual handbook , 2001 .

[81]  Will Steffen,et al.  Ecosystem consequences of changing biodiversity , 1998 .

[82]  T. Andersen,et al.  Pelagic food webs and eutrophication of coastal waters : Impact of grazers on algal communities , 1996 .

[83]  John Crank,et al.  The Mathematics Of Diffusion , 1956 .